المؤلفون: de la Rosa, Silvia, Schol, Christiaan R., Ramos Peregrina, Ángeles, Winter, David J., Hilgers, Anne M., Maeda, Kazuya, Iida, Yuichiro, Tarallo, Mariana, Jia, Ruifang, Beenen, Henriek G., Rocafort, Mercedes, de Wit, Pierre J.G.M., Bowen, Joanna K., Bradshaw, Rosie E., Joosten, Matthieu H.A.J., Bai, Yuling, Mesarich, Carl H.

المصدر: New Phytologist 243 (2024) 4 ; ISSN: 0028-646X

مصطلحات موضوعية: Avr9 and Avr9B avirulence effector genes, Cf-9 locus, Cf-9C and Cf-9B resistance genes, Fulvia fulva (Cladosporium fulvum), Solanum lycopersicum (tomato), fungus, sequential resistance breakdown, tomato leaf mould disease

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/670297

الاتاحة: https://research.wur.nl/en/publications/sequential-breakdown-of-the-cf-9-leaf-mould-resistance-locus-in-t
https://doi.org/10.1111/nph.19925

المؤلفون: Rocafort, Mercedes, Srivastava, Vaibhav, Bowen, Joanna K., Diaz-Moreno, Sara M, Guo, Yanan, Bulone, Vincent, Plummer, Kim M., Sutherland, Paul W., Anderson, Marilyn A., Bradshaw, Rosie E., Mesarich, Carl H.

المصدر: Microbiology Spectrum. 11(3)

مصطلحات موضوعية: apple scab, cell wall, KEYWORDS Venturia inaequalis, morphological differentiation, subcuticular infection structures

وصف الملف: print

URL الوصول: https://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-334628
https://doi.org/10.1128/spectrum.04219-22

المؤلفون: Zhang, Weiqi, Planas-Marquès, Marc, Mazier, Marianne, Šimkovicová, Margarita, Rocafort, Mercedes, Mantz, Melissa, Huesgen, Pitter, Takken, Frank, Stintzi, Annick, Schaller, Andreas, Coll, Nuria, Valls, Marc

المساهمون: Centre for Research in Agricultural Genomics (CRAG), Universitat de Barcelona (UB), Génétique et Amélioration des Fruits et Légumes (GAFL), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of Amsterdam Amsterdam = Universiteit van Amsterdam (UvA), Forschungszentrum Jülich GmbH, Helmholtz-Gemeinschaft = Helmholtz Association, Universität zu Köln = University of Cologne, Universität Hohenheim = University of Hohenheim, Consejo Superior de Investigaciones Cientificas España = Spanish National Research Council Spain (CSIC), CSIC CSC201906990041FPU15/02125CSC Fellowship865.14.003, ANR-11-BTBR-0001,GENIUS,Ingénierie cellulaire : amélioration et innovation technologiques pour les plantes d'une agriculture(2011)

المصدر: ISSN: 0960-7412.

مصطلحات موضوعية: apoplast, plant defence, Ralstonia solanacearum, serine protease, Solanum lycopersicum, [SDV]Life Sciences [q-bio]

Relation: info:eu-repo/semantics/altIdentifier/pmid/38150324; PUBMED: 38150324; WOS: 001133002200001

الاتاحة: https://hal.science/hal-04398628
https://hal.science/hal-04398628v1/document
https://hal.science/hal-04398628v1/file/The%20Plant%20Journal%20-%202023%20-%20Zhang%20-.pdf
https://doi.org/10.1111/tpj.16613

المؤلفون: Pedro Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Latif Azam, Fàtima, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre Parra, Carlos, Coll, Núria S., Orellano, Elena, Valls i Matheu, Marc

المصدر: Articles publicats en revistes (Genètica, Microbiologia i Estadística)

مصطلحات موضوعية: Nínxol ecològic, Bacteris patògens, Expressió gènica, Niche (Ecology), Pathogenic bacteria, Gene expression

وصف الملف: 26 p.; application/pdf

Relation: Reproducció del document publicat a: https://doi.org/10.1371/journal.ppat.1011888; PLoS Pathogens, 2023, vol. 19, num.12, p. 1-26; https://doi.org/10.1371/journal.ppat.1011888; http://hdl.handle.net/2445/208131; 740590

الاتاحة: http://hdl.handle.net/2445/208131

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

المساهمون: Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Generalitat de Catalunya, European Commission, Ministerio de Ciencia e Innovación (España), Universidad Autónoma de Barcelona

وصف الملف: application/pdf

Relation: #PLACEHOLDER_PARENT_METADATA_VALUE#; info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-108595RB-I00/ES/NUEVAS ESTRATEGIAS INFORMADAS PARA CONTROLAR LAS ENFERMEDADES BACTERIANAS DE LOS CULTIVOS/; info:eu-repo/grantAgreement/AEI//CEX2019-000917; Publisher's version; https://doi.org/10.1371/journal.ppat.1011888; Sí; PLoS Pathogens 19(12): e1011888 (2023); CEX2019-000917 (Centro Excelencia Severo Ochoa); http://hdl.handle.net/10261/343184

الاتاحة: http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888

المؤلفون: Rocafort, Mercedes, Bowen, Joanna K., Hassing, Berit, Cox, Murray P., McGreal, Brogan, de la Rosa, Silvia, Plummer, Kim M., Bradshaw, Rosie E., Mesarich, Carl H.

المصدر: BMC Biology ; volume 20, issue 1 ; ISSN 1741-7007

الاتاحة: http://dx.doi.org/10.1186/s12915-022-01442-9
https://link.springer.com/content/pdf/10.1186/s12915-022-01442-9.pdf
https://link.springer.com/article/10.1186/s12915-022-01442-9/fulltext.html

المؤلفون: Rocafort, Mercedes, Arshed, Saadiah, Hudson, Debbie, Sidhu, Jaspreet Singh, Bowen, Joanna K., Plummer, Kim M., Bradshaw, Rosie E., Johnson, Richard D., Johnson, Linda J., Mesarich, Carl H.

المصدر: Fungal Biology ; volume 126, issue 1, page 35-46 ; ISSN 1878-6146

الاتاحة: http://dx.doi.org/10.1016/j.funbio.2021.10.001
https://api.elsevier.com/content/article/PII:S187861462100132X?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S187861462100132X?httpAccept=text/plain

المؤلفون: Zhang, Weiqi, Planas‐Marquès, Marc, Mazier, Marianne, Šimkovicová, Margarita, Rocafort, Mercedes, Mantz, Melissa, Huesgen, Pitter F., Takken, Frank L. W., Stintzi, Annick, Schaller, Andreas, Coll, Nuria S., Valls, Marc

المصدر: Plant Journal; Apr2024, Vol. 118 Issue 2, p388-404, 17p

مصطلحات موضوعية: DRUG resistance in bacteria, RALSTONIA solanacearum, NICOTIANA benthamiana, AUTOCATALYSIS, PLANT-pathogen relationships, TOMATOES, FUSARIUM oxysporum

المؤلفون: Snelders, Nick C, Rovenich, Hanna, Petti, Gabriella C, Rocafort, Mercedes, van den Berg, Grardy C M, Vorholt, Julia A, Mesters, Jeroen R, Seidl, Michael F, Nijland, Reindert, Thomma, Bart P H J

المساهمون: Sub Bioinformatics, Theoretical Biology and Bioinformatics

مصطلحات موضوعية: Taverne

وصف الملف: application/pdf

Relation: https://dspace.library.uu.nl/handle/1874/409797

الاتاحة: https://dspace.library.uu.nl/handle/1874/409797

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Alternate carbon sources, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343508
https://doi.org/10.1371/journal.ppat.1011888.s015
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s015
Sí

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Alternate carbon sources, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343496
https://doi.org/10.1371/journal.ppat.1011888.s013
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s013
Sí

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Alternate carbon sources, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343461
https://doi.org/10.1371/journal.ppat.1011888.s008
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s008
Sí

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Alternate carbon sources, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343492
https://doi.org/10.1371/journal.ppat.1011888.s012
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s012
Sí

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Alternate carbon sources, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343500
https://doi.org/10.1371/journal.ppat.1011888.s014
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s014
Sí

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Alternate carbon sources, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343475
https://doi.org/10.1371/journal.ppat.1011888.s009
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s009
Sí

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Alternate carbon sources, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343477
https://doi.org/10.1371/journal.ppat.1011888.s010
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s010
Sí

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343488
https://doi.org/10.1371/journal.ppat.1011888.s011
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s011
Sí

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: dataset

URL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE239723
http://hdl.handle.net/10261/343545
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
Sí

المؤلفون: Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Generalitat de Catalunya, European Commission, Ministerio de Ciencia e Innovación (España), Universidad Autónoma de Barcelona, Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: artículo

URL: http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888
Publisher's version
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S1 Dataset. DEGs in the two environmental conditions (Soil and Water) and in the three in planta conditions (Apoplast, Early xyem and Late xylem) compared to the reference rich B medium (phi) [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s001
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S1 Table. List of waters used in this work [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s002
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S2 Table. Chemical analysis of the natural soil used in the study [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s003
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S3 Table. List of genes correspoding to the intersections shown in the UpsetR plots (Fig 1B and 1D) [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s004
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S4 Table. TAG enrichment analysis summary [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s005
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S5 Table. Output tables of the KEGG and GO enrichment analysis conducted on general and exclusive up- and downregulated DEGs from water and soil conditions [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s006
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S6 Table. Bacterial strains, plasmids, and oligonucleotides used in this work [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s007
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S1 Fig. Experimental set-up and differentially expressed genes (DEGs) [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s008
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S2 Fig. GO and KEGG enrichment analyses of the environmental conditions [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s009
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S3 Fig. Time-course expression of the PhrpB::Lux reporter in strains disrupted for the different T3SS regulatory genes after resuspension in water [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s010
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S4 Fig. Induction of the type 3 secretion system (T3SS) by basic pH in all natural water sources tested [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s011
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S5 Fig. Induction of nitrogen metabolism genes in soil [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s012
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S6 Fig. Expression of all stress response and the type 3 secretion system (T3SS) and type 3 effector gene groups [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s013
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S8 Fig. Viability of R. solanacearum cells in soil microcosms [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s015
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "S7 Fig. Expression of key genes associated with oxidative stress in soil and water at 3 dpi [Dataset]"; Figshare; https://doi.org/10.1371/journal.ppat.1011888.s014
Pedro-Jové, Roger de ; Corral, Jordi ; Rocafort, Mercedes ; Puigvert, Marina ; Azam, Fàtima Latif ; Vandecaveye, Agustina ; Macho, Alberto P. ; Balsalobre, Carlos ; Coll, Núria S. ; Orellano, Elena G. ; Valls, Marc; 2023; "Gene expression profiling of Ralstonia solanacearum in unexplored environmental niches reveals essential genes to complete its life cycle [Dataset]"; GEO; https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE239723
https://doi.org/10.1371/journal.ppat.1011888
Sí
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-108595RB-I00/ES/NUEVAS ESTRATEGIAS INFORMADAS PARA CONTROLAR LAS ENFERMEDADES BACTERIANAS DE LOS CULTIVOS
info:eu-repo/grantAgreement/AEI//CEX2019-000917

المؤلفون: Pedro-Jové, Roger de, Corral, Jordi, Rocafort, Mercedes, Puigvert, Marina, Azam, Fàtima Latif, Vandecaveye, Agustina, Macho, Alberto P., Balsalobre, Carlos, Coll, Núria S., Orellano, Elena G., Valls, Marc

مصطلحات الفهرس: Providing valuable insights, Potential disease outbreaks, Non culturable state, Late xylem colonization, Diverse ecological niches, Alternate carbon sources, Bacterial wilt disease, Bacterial pathogens exhibit, Bacterial plant pathogen, Oxidative stress response, Investigate pathogen adaptation, div >< p, Life cycle allow, Ralstonia solanacearum, Life cycle, Solanacearum, Bacterial survival, Bacterial reservoirs, Upregulated stress, Glyoxylate cycle, r, Planta, vbnc )., Two environments, t3ss induction, t3ss )., Remarkable ability, Regulator oxyr, Premature induction, Phenylacetate catabolism, Mechanisms enabling, Intriguing induction, Gene expression, Function experiments, Environments occupied, Downregulated virulence, Deletion cause, Culturability associated, Control dissemination, Causing agent, Catalase katg, Alkaline ph, dataset

URL: http://hdl.handle.net/10261/343449
https://doi.org/10.1371/journal.ppat.1011888.s007
Publisher's version
Pedro-Jové, Roger de; Corral, Jordi; Rocafort, Mercedes; Puigvert, Marina; Azam, Fàtima Latif; Vandecaveye, Agustina; Macho, Alberto P.; Balsalobre, Carlos; Coll, Núria S.; Orellano, Elena G.; Valls, Marc. Gene expression changes throughout the life cycle allow a bacterial plant pathogen to persist in diverse environmental habitats. https://doi.org/10.1371/journal.ppat.1011888. http://hdl.handle.net/10261/343184
https://doi.org/10.1371/journal.ppat.1011888.s007
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