المؤلفون: Thomas, Molly, Slowikowski, Kamil, Manakongtreecheep, Kasidet, Sen, Pritha, Samanta, Nandini, Tantivit, Jessica, Nasrallah, Mazen, Zubiri, Leyre, Smith, Neal, Tirard, Alice, Ramesh, Swetha, Arnold, Benjamin, Nieman, Linda, Chen, Jonathan, Eisenhaure, Thomas, Pelka, Karin, Song, Yuhui, Xu, Katherine, Jorgji, Vjola, Pinto, Christopher, Sharova, Tatyana, Glasser, Rachel, Chan, PuiYee, Sullivan, Ryan, Khalili, Hamed, Juric, Dejan, Boland, Genevieve, Dougan, Michael, Hacohen, Nir, Li, Bo, Reynolds, Kerry, Villani, Alexandra-Chloé

المصدر: Nature Medicine. 30(5)

مصطلحات موضوعية: Humans, Immune Checkpoint Inhibitors, Colitis, Single-Cell Analysis, Intestinal Mucosa, Female, Male, Gene Expression Profiling, CD8-Positive T-Lymphocytes, Middle Aged, Programmed Cell Death 1 Receptor, Aged, Transcriptome, CTLA-4 Antigen, T-Lymphocytes, Regulatory, Colon, Epithelial Cells

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4g72n39z
https://escholarship.org/content/qt4g72n39z/qt4g72n39z.pdf

المؤلفون: Lareau, Caleb, Liu, Vincent, Muus, Christoph, Praktiknjo, Samantha, Nitsch, Lena, Kautz, Pauline, Sandor, Katalin, Yin, Yajie, Gutierrez, Jacob, Pelka, Karin, Satpathy, Ansuman, Regev, Aviv, Sankaran, Vijay, Ludwig, Leif

المصدر: Nature Protocols. 18(5)

مصطلحات موضوعية: Animals, Humans, Chromatin, Chromatin Immunoprecipitation Sequencing, Multiomics, Sequence Analysis, DNA, High-Throughput Nucleotide Sequencing, DNA, Mitochondrial, Genotype, Mammals

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4573402x
https://escholarship.org/content/qt4573402x/qt4573402x.pdf

المؤلفون: Albers, Julian, Pelka, Karin

مصطلحات موضوعية: cell-cell communication, human immunology, multicellularinteraction networks, single cell, systems immunology, tissue biology, Cell Communication, Communication, Humans

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/2fz8g8mt
https://escholarship.org/content/qt2fz8g8mt/qt2fz8g8mt.pdf

المؤلفون: Engels, Scott, Sequeira, Ana Marta, Ijsselsteijn, Marieke, Manzato, Benedetta, Cardoso, Sara, Dang, Hao, Boonstra, Jurjen J, Hawinkels, Lukas JAC, Pelka, Karin, Mahfouz, Ahmed, Miranda, Noel de, Roelands, Jessica P

المصدر: Regular and Young Investigator Award Abstracts ; page A1544-A1544

الاتاحة: https://doi.org/10.1136/jitc-2024-sitc2024.1381
https://syndication.highwire.org/content/doi/10.1136/jitc-2024-SITC2024.1381

المؤلفون: Pelka, Karin, Hofree, Matan, Chen, Jonathan, Sarkizova, Siranush, Pirl, Joshua, Jorgji, Vjola, Bejnood, Alborz, Dionne, Danielle, Ge, William, Xu, Katherine, Chao, Sherry, Zollinger, Daniel, Lieb, David, Reeves, Jason, Fuhrman, Christopher, Hoang, Margaret, Delorey, Toni, Nguyen, Lan, Waldman, Julia, Klapholz, Max, Wakiro, Isaac, Cohen, Ofir, Albers, Julian, Smillie, Christopher, Cuoco, Michael, Wu, Jingyi, Su, Mei-Ju, Yeung, Jason, Vijaykumar, Brinda, Magnuson, Angela, Asinovski, Natasha, Moll, Tabea, Goder-Reiser, Max, Applebaum, Anise, Brais, Lauren, DelloStritto, Laura, Denning, Sarah, Phillips, Susannah, Hill, Emma, Meehan, Julia, Frederick, Dennie, Sharova, Tatyana, Kanodia, Abhay, Todres, Ellen, Jané-Valbuena, Judit, Biton, Moshe, Izar, Benjamin, Lambden, Conner, Clancy, Thomas, Bleday, Ronald, Melnitchouk, Nelya, Irani, Jennifer, Kunitake, Hiroko, Berger, David, Srivastava, Amitabh, Hornick, Jason, Ogino, Shuji, Rotem, Asaf, Vigneau, Sébastien, Johnson, Bruce, Corcoran, Ryan, Sharpe, Arlene, Kuchroo, Vijay, Ng, Kimmie, Giannakis, Marios, Nieman, Linda, Boland, Genevieve, Aguirre, Andrew, Anderson, Ana, Rozenblatt-Rosen, Orit, Regev, Aviv, Hacohen, Nir

المصدر: Cell. 184(18)

مصطلحات موضوعية: MSI, MSS, anti-tumor immunity, cell-cell interactions, colorectal cancer, mismatch repair-deficient, mismatch repair-proficient, scRNA-seq, spatial, tumor atlas, Bone Morphogenetic Proteins, Cancer-Associated Fibroblasts, Cell Compartmentation, Cell Line, Tumor, Chemokines, Cohort Studies, Colorectal Neoplasms, DNA Mismatch Repair, Endothelial Cells, Gene Expression Regulation, Neoplastic, Humans, Immunity, Inflammation, Monocytes, Myeloid Cells, Neutrophils, Stromal Cells, T-Lymphocytes, Transcription, Genetic

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/3b4417p8
https://escholarship.org/content/qt3b4417p8/qt3b4417p8.pdf

المؤلفون: Tian, Jun, Chen, Jonathan H., Chao, Sherry X., Pelka, Karin, Giannakis, Marios, Hess, Julian, Burke, Kelly, Jorgji, Vjola, Sindurakar, Princy, Braverman, Jonathan, Mehta, Arnav, Oka, Tomonori, Huang, Mei, Lieb, David, Spurrell, Maxwell, Allen, Jill N., Abrams, Thomas A., Clark, Jeffrey W., Enzinger, Andrea C., Enzinger, Peter C., Klempner, Samuel J., McCleary, Nadine J., Meyerhardt, Jeffrey A., Ryan, David P., Yurgelun, Matthew B., Kanter, Katie, Van Seventer, Emily E., Baiev, Islam, Chi, Gary, Jarnagin, Joy, Bradford, William B., Wong, Edmond, Michel, Alexa G., Fetter, Isobel J., Siravegna, Giulia, Gemma, Angelo J., Sharpe, Arlene, Demehri, Shadmehr, Leary, Rebecca, Campbell, Catarina D., Yilmaz, Omer, Getz, Gad A., Parikh, Aparna R., Hacohen, Nir, Corcoran, Ryan B.

المساهمون: U.S. Department of Health & Human Services | NIH | National Cancer Institute, EIF | Stand Up To Cancer

المصدر: Nature Medicine ; volume 29, issue 2, page 458-466 ; ISSN 1078-8956 1546-170X

الاتاحة: http://dx.doi.org/10.1038/s41591-022-02181-8
https://www.nature.com/articles/s41591-022-02181-8.pdf
https://www.nature.com/articles/s41591-022-02181-8

المؤلفون: Sirois, Cherilyn M., Jin, Tengchuan, Miller, Allison L., Bertheloot, Damien, Nakamura, Hirotaka, Horvath, Gabor, Mian, Abubakar, Jiang, Jiansheng, Schrum, Jacob, Bossaller, Lukas, Pelka, Karin, Garbi, Natalio, Brewah, Yambasu, Tian, Jane, Chang, ChewShun, Chowdhury, Partha S., Sims, Gary P., Kolbeck, Roland, Coyle, Anthony J., Humbles, Alison A., Xiao, T. Sam, Latz, Eicke

المساهمون: Department of Medicine, Division of Infectious Diseases and Immunology

المصدر: The Journal of experimental medicine ; 210 ; 11 ; 2447-63

مصطلحات موضوعية: Animals, Base Sequence, Cell Membrane, Crystallography, X-Ray, DNA, Endocytosis, Endosomes, HEK293 Cells, HeLa Cells, Humans, Ligands, Lung, Mice, Inbred C57BL, Models, Molecular, NF-kappa B, Pneumonia, Protein Binding, Protein Multimerization, Protein Structure, Tertiary, Receptors, Immunologic, Static Electricity, Toll-Like Receptor 9, Biochemistry, Cellular and Molecular Physiology, Immunity

Relation: Link to Article in PubMed; J Exp Med. 2013 Oct 21;210(11):2447-63. doi:10.1084/jem.20120201. Epub 2013 Sep 30. Link to article on publisher's site; 0022-1007 (Linking); http://hdl.handle.net/20.500.14038/30504; https://escholarship.umassmed.edu/cgi/viewcontent.cgi?article=1783&context=faculty_pubs&unstamped=1; https://escholarship.umassmed.edu/faculty_pubs/782; 7693433; faculty_pubs/782

الاتاحة: https://doi.org/10.1084/jem.20120201
https://hdl.handle.net/20.500.14038/30504
https://escholarship.umassmed.edu/cgi/viewcontent.cgi?article=1783&context=faculty_pubs&unstamped=1
https://escholarship.umassmed.edu/faculty_pubs/782

المؤلفون: Albers, Julian J., Pelka, Karin

مصطلحات موضوعية: info:eu-repo/classification/ddc, Immunology, human immunology, tissue biology, systems immunology, single cell, multicellularinteraction networks, cell-cell communication

وصف الملف: application/pdf

Relation: https://mediatum.ub.tum.de/1661036; https://mediatum.ub.tum.de/doc/1661036/document.pdf

الاتاحة: https://mediatum.ub.tum.de/1661036
https://mediatum.ub.tum.de/doc/1661036/document.pdf
https://doi.org/10.3389/fimmu.2022.884185

المؤلفون: Price, Colles, Chen, Jonathan, Pelka, Karin, Chao, Sherry, He, Jiang, Boland, Genevieve, Emanuel, George, Hacohen, Nir

المصدر: Regular and Young Investigator Award Abstracts ; page A965-A965

الاتاحة: http://dx.doi.org/10.1136/jitc-2021-sitc2021.920
https://syndication.highwire.org/content/doi/10.1136/jitc-2021-SITC2021.920

المؤلفون: Chen, Jonathan, Pelka, Karin, Hofree, Matan, Giannakis, Marios, Boland, Genevieve, Aguirre, Andrew, Anderson, Ana, Rozenblatt-Rosen, Orit, Regev, Aviv, Hacohen, Nir

المصدر: Regular and Young Investigator Award Abstracts ; page A670-A670

الاتاحة: http://dx.doi.org/10.1136/jitc-2021-sitc2021.641
https://syndication.highwire.org/content/doi/10.1136/jitc-2021-SITC2021.641

المؤلفون: Chen, Jonathan H., Nieman, Linda T., Spurrell, Maxwell, Jorgji, Vjola, Elmelech, Liad, Richieri, Peter, Xu, Katherine H., Madhu, Roopa, Parikh, Milan, Zamora, Izabella, Mehta, Arnav, Nabel, Christopher S., Freeman, Samuel S., Pirl, Joshua D., Lu, Chenyue, Meador, Catherine B., Barth, Jaimie L., Sakhi, Mustafa, Tang, Alexander L., Sarkizova, Siranush, Price, Colles, Fernandez, Nicolas F., Emanuel, George, He, Jiang, Van Raay, Katrina, Reeves, Jason W., Yizhak, Keren, Hofree, Matan, Shih, Angela, Sade-Feldman, Moshe, Boland, Genevieve M., Pelka, Karin, Aryee, Martin J., Mino-Kenudson, Mari, Gainor, Justin F., Korsunsky, Ilya, Hacohen, Nir

المساهمون: NIH

المصدر: Nature Immunology ; volume 25, issue 4, page 644-658 ; ISSN 1529-2908 1529-2916

الاتاحة: http://dx.doi.org/10.1038/s41590-024-01792-2
https://www.nature.com/articles/s41590-024-01792-2.pdf
https://www.nature.com/articles/s41590-024-01792-2

المؤلفون: Dietl, Alisa, Ralser, Anna, Pelka, Karin

المساهمون: National Cancer Institute, National Institutes of Health, Parker Institute for Cancer Immunotherapy

المصدر: Immunity ; volume 57, issue 3, page 406-408 ; ISSN 1074-7613

الاتاحة: http://dx.doi.org/10.1016/j.immuni.2024.02.015
https://api.elsevier.com/content/article/PII:S1074761324000918?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1074761324000918?httpAccept=text/plain

المؤلفون: Thada, Shruthi, Horvath, Gabor L., Müller, Mario M., Dittrich, Nickel, Conrad, Melanie L., Sur, Saubashya, Hussain, Abid, Pelka, Karin, Gaddam, Suman Latha, Latz, Eicke, Slevogt, Hortense, Schumann, Ralf R., Burkert, Sanne

مصطلحات موضوعية: TLR4, TLR8, SNP analysis, heterodimerisation, Tuberculosis, Immunology, Toll-like receptors, Tuberkulose, Immunologie

وصف الملف: application/pdf

الاتاحة: https://doi.org/10.18725/OPARU-48709
http://nbn-resolving.de/urn:nbn:de:bsz:289-oparu-48785-9

المؤلفون: Filbin, Michael R., Mehta, Arnav, Schneider, Alexis M., Kays, Kyle R., Guess, Jamey R., Gentili, Matteo, Fenyves, Bánk G., Charland, Nicole C., Gonye, Anna L.K., Gushterova, Irena, Khanna, Hargun K., LaSalle, Thomas J., Lavin-Parsons, Kendall M., Lilley, Brendan M., Lodenstein, Carl L., Manakongtreecheep, Kasidet, Margolin, Justin D., McKaig, Brenna N., Rojas-Lopez, Maricarmen, Russo, Brian C., Sharma, Nihaarika, Tantivit, Jessica, Thomas, Molly F., Gerszten, Robert E., Heimberg, Graham S., Hoover, Paul J., Lieb, David J., Lin, Brian, Ngo, Debby, Pelka, Karin, Reyes, Miguel, Smillie, Chris S, Waghray, Avinash, Wood, Thomas E., Zajac, Amanda S., Jennings, Lori L., Grundberg, Ida, Bhattacharyya, Roby P., Parry, Blair Alden, Villani, Alexandra-Chloé, Sade-Feldman, Moshe, Hacohen, Nir, Goldberg, Marcia B.

المساهمون: Massachusetts Institute of Technology. Department of Biological Engineering, Broad Institute of MIT and Harvard

المصدر: Elsevier

وصف الملف: application/pdf

Relation: http://dx.doi.org/10.1016/j.xcrm.2021.100287; Cell Reports Medicine; https://hdl.handle.net/1721.1/131124; Filbin, Michael R. et al. "Longitudinal proteomic analysis of severe COVID-19 reveals survival-associated signatures, tissue-specific cell death, and cell-cell interactions." Cell Reports Medicine 2, 5 (May 2021): 100287 © 2021 The Authors

الاتاحة: https://hdl.handle.net/1721.1/131124

المؤلفون: Chen, Bob, Scurrah, Cherie’ R., McKinley, Eliot T., Simmons, Alan J., Ramirez-Solano, Marisol A., Zhu, Xiangzhu, Markham, Nicholas O., Heiser, Cody N., Vega, Paige N., Rolong, Andrea, Kim, Hyeyon, Sheng, Quanhu, Drewes, Julia L., Zhou, Yuan, Southard-Smith, Austin N., Xu, Yanwen, Ro, James, Jones, Angela L., Revetta, Frank, Berry, Lynne D., Niitsu, Hiroaki, Islam, Mirazul, Pelka, Karin, Hofree, Matan, Chen, Jonathan H., Sarkizova, Siranush, Ng, Kimmie, Giannakis, Marios, Boland, Genevieve M., Aguirre, Andrew J., Anderson, Ana C., Rozenblatt-Rosen, Orit, Regev, Aviv, Hacohen, Nir, Kawasaki, Kenta, Sato, Toshiro, Goettel, Jeremy A., Grady, William M., Zheng, Wei, Washington, M. Kay, Cai, Qiuyin, Sears, Cynthia L., Goldenring, James R., Franklin, Jeffrey L., Su, Timothy, Huh, Won Jae, Vandekar, Simon, Roland, Joseph T., Liu, Qi, Coffey, Robert J.

المصدر: Cell ; volume 184, issue 26, page 6262-6280.e26 ; ISSN 0092-8674

الاتاحة: http://dx.doi.org/10.1016/j.cell.2021.11.031
https://api.elsevier.com/content/article/PII:S0092867421013817?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867421013817?httpAccept=text/plain

المؤلفون: Filbin, Michael, Mehta, Arnav, Schneider, Alexis, Kays, Kyle, Guess, Jamey, Gentili, Matteo, Fenyves, Bank, Charland, Nicole, Gonye, Anna, Gushterova, Irena, Khanna, Hargun, LaSalle, Thomas, Lavin-Parsons, Kendall, Lilly, Brendan, Lodenstein, Carl, Manakongtreecheep, Kasidet, Margolin, Justin, McKaig, Brenna, Rojas-Lopez, Maricarmen, Russo, Brian, Sharma, Nihaarika, Tantivit, Jessica, Thomas, Molly, Gerszten, Robert, Heimberg, Graham, Hoover, Paul, Lieb, David, Lin, Brian, Ngo, Debby, Pelka, Karin, Reyes, Miguel, Smillie, Christopher, Waghray, Avinash, Wood, Thomas, Zajac, Amanda, Jennings, Lori, Grundberg, Ida, Bhattacharyya, Roby, Parry, Blair, Villani, Alexandra-Chloe, Sade-Feldman, Moshe, Hacohen, Nir, Goldberg, Marcia

مصطلحات موضوعية: COVID19, Proteomics, Immunology

Relation: https://doi.org/10.1101/2020.11.02.365536; oai:zenodo.org:4661441

الاتاحة: https://doi.org/10.1101/2020.11.02.365536

المؤلفون: Johnstone, Sarah E., Reyes, Alejandro, Qi, Yifeng, Adriaens, Carmen, Hegazi, Esmat, Pelka, Karin, Chen, Jonathan H., Zou, Luli S., Drier, Yotam, Hecht, Vivian, Shoresh, Noam, Selig, Martin K., Lareau, Caleb A., Iyer, Sowmya, Nguyen, Son C., Joyce, Eric F., Hacohen, Nir, Irizarry, Rafael A., Zhang, Bin, Aryee, Martin J., Bernstein, Bradley E.

المساهمون: National Cancer Institute

المصدر: Cell ; volume 182, issue 6, page 1474-1489.e23 ; ISSN 0092-8674

الاتاحة: http://dx.doi.org/10.1016/j.cell.2020.07.030
https://api.elsevier.com/content/article/PII:S0092867420309387?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867420309387?httpAccept=text/plain

المؤلفون: Ludwig, Leif S., Lareau, Caleb A., Ulirsch, Jacob C., Christian, Elena, Muus, Christoph, Li, Lauren H., Pelka, Karin, Ge, Will, Oren, Yaara, Brack, Alison, Law, Travis, Rodman, Christopher, Chen, Jonathan H., Boland, Genevieve M., Hacohen, Nir, Rozenblatt-Rosen, Orit, Aryee, Martin J., Buenrostro, Jason D., Regev, Aviv, Sankaran, Vijay G.

المساهمون: NIH, Broad Institute Fellows, Allen Institute, German Research Foundation, Broad Institute SPARC, New York Stem Cell Foundation, Howard Hughes Medical Institute, Klarman Cell Observatory

المصدر: Cell ; volume 176, issue 6, page 1325-1339.e22 ; ISSN 0092-8674

الاتاحة: http://dx.doi.org/10.1016/j.cell.2019.01.022
https://api.elsevier.com/content/article/PII:S0092867419300558?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867419300558?httpAccept=text/plain

المؤلفون: Lareau, Caleb A., Ludwig, Leif S., Muus, Christoph, Gohil, Satyen H., Zhao, Tongtong, Chiang, Zachary, Pelka, Karin, Verboon, Jeffrey M., Luo, Wendy, Christian, Elena, Rosebrock, Daniel, Getz, Gad, Boland, Genevieve M., Chen, Fei, Buenrostro, Jason D., Hacohen, Nir, Wu, Catherine J., Aryee, Martin J., Regev, Aviv, Sankaran, Vijay G.

المصدر: Nature Biotechnology ; volume 41, issue 9, page 1345-1345 ; ISSN 1087-0156 1546-1696

الاتاحة: https://doi.org/10.1038/s41587-023-01942-1
https://www.nature.com/articles/s41587-023-01942-1.pdf
https://www.nature.com/articles/s41587-023-01942-1

المؤلفون: Sun, Yi, Revach, Or-yam, Anderson, Seth, Kessler, Emily A., Wolfe, Clara H., Jenney, Anne, Mills, Caitlin E., Robitschek, Emily J., Davis, Thomas G. R., Kim, Sarah, Fu, Amina, Ma, Xiang, Gwee, Jia, Tiwari, Payal, Du, Peter P., Sindurakar, Princy, Tian, Jun, Mehta, Arnav, Schneider, Alexis M., Yizhak, Keren, Sade-Feldman, Moshe, LaSalle, Thomas, Sharova, Tatyana, Xie, Hongyan, Liu, Shuming, Michaud, William A., Saad-Beretta, Rodrigo, Yates, Kathleen B., Iracheta-Vellve, Arvin, Spetz, Johan K. E., Qin, Xingping, Sarosiek, Kristopher A., Zhang, Gao, Kim, Jong Wook, Su, Mack Y., Cicerchia, Angelina M., Rasmussen, Martin Q., Klempner, Samuel J., Juric, Dejan, Pai, Sara I., Miller, David M., Giobbie-Hurder, Anita, Chen, Jonathan H., Pelka, Karin, Frederick, Dennie T., Stinson, Susanna, Ivanova, Elena, Aref, Amir R., Paweletz, Cloud P., Barbie, David A.

المصدر: Nature ; volume 615, issue 7950, page 158-167 ; ISSN 0028-0836 1476-4687

الاتاحة: http://dx.doi.org/10.1038/s41586-023-05704-6
https://www.nature.com/articles/s41586-023-05704-6.pdf
https://www.nature.com/articles/s41586-023-05704-6