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1Report
المؤلفون: Reme, Raphael, Newson, Alasdair, Angelini, Elsa, Olivo-Marin, Jean-Christophe, Lagache, Thibault
مصطلحات موضوعية: Computer Science - Computer Vision and Pattern Recognition
URL الوصول: http://arxiv.org/abs/2411.09462
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2Report
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3Report
المؤلفون: Habis, Antoine, Nathanson, Roy Rosman, Meas-Yedid, Vannary, Angelini, Elsa D., Olivo-Marin, Jean-Christophe
مصطلحات موضوعية: Computer Science - Computer Vision and Pattern Recognition
URL الوصول: http://arxiv.org/abs/2402.08333
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4Conference
المساهمون: Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Dynamique des Interactions Hôte-Pathogène - Dynamics of Host-Pathogen Interactions
المصدر: IEEE International Symposium on Biomedical Imaging ; https://hal.science/hal-04870375 ; IEEE International Symposium on Biomedical Imaging, 2025
مصطلحات موضوعية: [STAT]Statistics [stat]
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5
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6Report
المؤلفون: Aviyente, Selin, Frangi, Alejandro, Meijering, Erik, Muñoz-Barrutia, Arrate, Liebling, Michael, Van De Ville, Dimitri, Olivo-Marin, Jean-Christophe, Kovačević, Jelena, Unser, Michael
مصطلحات موضوعية: Electrical Engineering and Systems Science - Signal Processing, Quantitative Biology - Quantitative Methods
URL الوصول: http://arxiv.org/abs/2210.17346
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7
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8Conference
المؤلفون: Nardi, Giacomo, Santos Sano, Matheus, Brelot, Anne, Olivo-Marin, Jean-Christophe, Lagache, Thibault
المساهمون: Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Dynamique des Interactions Hôte-Pathogène - Dynamics of Host-Pathogen Interactions
المصدر: International Symposium on Biomedical Imaging (ISBI) ; https://pasteur.hal.science/pasteur-04671759 ; International Symposium on Biomedical Imaging (ISBI), IEEE, 2024, ⟨10.1109/ISBI56570.2024.10635804⟩
مصطلحات موضوعية: Motion classification, subdiffusive pro- cesses, machine learning, geometric features, [MATH]Mathematics [math], [SDV]Life Sciences [q-bio]
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9Conference
المؤلفون: Dorra, Benjamin, Nardi, Giacomo, Habis, Antoine, Annereau, Jean-Philippe, Olivo-Marin, Jean-Christophe, Briseño-Roa, Luis, Vannary, Meas-Yedid
المساهمون: Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Medetia Pharmaceuticals, Imagine - Institut des maladies génétiques (IHU) (Imagine - U1163), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité)
المصدر: 2024 IEEE International Symposium on Biomedical Imaging (ISBI)
https://hal.science/hal-04731416
2024 IEEE International Symposium on Biomedical Imaging (ISBI), May 2024, Athens, France. pp.1-5, ⟨10.1109/ISBI56570.2024.10635431⟩مصطلحات موضوعية: WSI, histology, retina, segmentation, deep learning, CNN, semi-supervision, topological penalization, Atrophy, Image segmentation, In vivo, Correlation, Manuals, Mice, [INFO]Computer Science [cs]
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10Conference
المؤلفون: Nardi, Giacomo, Santos Sano, Matheus, Brelot, Anne, Olivo-Marin, Jean-Christophe, Lagache, Thibault
المساهمون: Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Dynamique des Interactions Hôte-Pathogène - Dynamics of Host-Pathogen Interactions, IEEE
المصدر: International Symposium on Biomedical Imaging (ISBI) ; https://pasteur.hal.science/pasteur-04626746 ; International Symposium on Biomedical Imaging (ISBI), IEEE, May 2024, Athens (Greece), Greece
مصطلحات موضوعية: Single particle tracking, Statistics, Geometrical features, Machine leaning, Random forest, Diffusion, Brownian motion, CCR5, Sub-diffusion, TIRF Microscopy, [MATH]Mathematics [math], [SDV]Life Sciences [q-bio]
جغرافية الموضوع: Greece
Time: Athens (Greece), Greece
Relation: pasteur-04626746; https://pasteur.hal.science/pasteur-04626746; https://pasteur.hal.science/pasteur-04626746v2/document; https://pasteur.hal.science/pasteur-04626746v2/file/Motion_classification_based_on_geometrical_features_of_trajectories___ISBI2024.pdf
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11Conference
المؤلفون: Reme, Raphael, Newson, Alasdair, Angelini, Elsa, Olivo-Marin, Jean-Christophe, Lagache, Thibault
المساهمون: Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Laboratoire Traitement et Communication de l'Information (LTCI), Institut Mines-Télécom Paris (IMT)-Télécom Paris, Image, Modélisation, Analyse, GEométrie, Synthèse (IMAGES), Institut Mines-Télécom Paris (IMT)-Télécom Paris-Institut Mines-Télécom Paris (IMT)-Télécom Paris, Département Images, Données, Signal (IDS), Télécom ParisTech, IEEE
المصدر: International Symposium on Biomedical Imaging (ISBI) ; https://pasteur.hal.science/pasteur-04626732 ; International Symposium on Biomedical Imaging (ISBI), IEEE, May 2024, Athens (Greece), France
مصطلحات موضوعية: Calcium imaging, Single-Particle-Tracking, Optical Flow, Kalman Filtering, [INFO]Computer Science [cs], [SDV]Life Sciences [q-bio]
جغرافية الموضوع: France
Time: Athens (Greece), France
Relation: pasteur-04626732; https://pasteur.hal.science/pasteur-04626732; https://pasteur.hal.science/pasteur-04626732/document; https://pasteur.hal.science/pasteur-04626732/file/Kalman_and_optical_flow_filtering-1.pdf
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12
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13Report
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14Academic Journal
المساهمون: Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Biologie du Développement et Cellules souches (Département) (CNRS UMR3738), Collège Doctoral, Sorbonne Université (SU), This work was supported in part by the France-BioImaging (FBI) infrastructure under Grant ANR-10-INBS-04 and the Program PIA INCEPTION under Grant ANR-16-CONV-0005. The Olivo-Marin and Schmidt labs are supported by core funding from the Institut Pasteur and the program PTR 439–2021., ANR-16-CONV-0005,INCEPTION,Institut Convergences pour l'étude de l'Emergence des Pathologies au Travers des Individus et des populatiONs(2016), ANR-10-INBS-0004,France-BioImaging,Développment d'une infrastructure française distribuée coordonnée(2010)
المصدر: EISSN: 2633-903X ; Biological Imaging ; https://pasteur.hal.science/pasteur-04887860 ; Biological Imaging, 2024, 4, pp.e11. ⟨10.1017/s2633903x24000102⟩
مصطلحات موضوعية: 3D Segmentation, Persistent Homology, Morphogenesis, [MATH]Mathematics [math]
Relation: info:eu-repo/semantics/altIdentifier/pmid/39776612; PUBMED: 39776612; PUBMEDCENTRAL: PMC11704129
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15Academic Journal
المؤلفون: Manich, Maria, Bochet, Pascal, Boquet-Pujadas, Aleix, Rose, Thierry, Laenen, Gertjan, Guillén, Nancy, Olivo-Marin, Jean-Christophe, Labruyère, Elisabeth
المساهمون: Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Ecole Polytechnique Fédérale de Lausanne (EPFL), Plateforme d'Innovation et de Développement de Tests Diagnostiques / Diagnostic Test Innovation and Development Core Facility, Institut Pasteur Paris (IP)-Université Paris Cité (UPCité), JC. OM got grants from the Labex IBEID (ANR-10-LABX-62-IBEID), France-BioImaging (ANR-10-INBS-04), the PIA INCEPTION program (ANR-16-CONV-0005) and HORIZON-HLTH-2021-DISEASE (H2020 HLTH DI-DIDA). E.L got the Emulate Carnot Pasteur Medecin Santé call and the Institut Pasteur 232 PTR grant (PTR Mechabiome). The UTechS PBI is supported by the French National Research Agency (France BioImaging, ANR-10–INBS–04, Investments for the Future). G.L. was a master student at Sorbonne University supported by Erasmus+. A.BP was supported by the Institut Pasteur through the 232 PTR grant Mechabiome., We gratefully acknowledge the UtechS Photonic BioImaging (Imagopole), C2RT at Institut Pasteur for advice and access to the UltraVIEW VOX system. We are also thankful to Stephane Dallongeville (BIA Unit, Institut Pasteur) for his advice on Icy and on image analysis., ANR-16-CONV-0005,INCEPTION,Institut Convergences pour l'étude de l'Emergence des Pathologies au Travers des Individus et des populatiONs(2016), ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), ANR-10-INBS-0004,France-BioImaging,Développment d'une infrastructure française distribuée coordonnée(2010), European Project: 101057251,HORIZON-HLTH-2021-DISEASE-04 ,10.3030/101057251,DI-DIDA(2022)
المصدر: ISSN: 1553-7366.
مصطلحات موضوعية: Entamoeba Histolytica, Amoebas, Trophozoites, Adhesives, Actins, Cell mobility, Cell migration, Cytoskeleton, [SDV]Life Sciences [q-bio]
Relation: info:eu-repo/semantics/altIdentifier/pmid/39052670; info:eu-repo/grantAgreement//101057251/EU/Digital Innovations and Diagnostics for Infectious Diseases in Africa/DI-DIDA; PUBMED: 39052670; PUBMEDCENTRAL: PMC11302856
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16Academic Journal
المؤلفون: Fuster-Barceló, Caterina, García-López-de-Haro, Carlos, Gómez-de-Mariscal, Estibaliz, Ouyang, Wei, Olivo-Marin, Jean-Christophe, Sage, Daniel, Muñoz-Barrutia, Arrate
المساهمون: European Molecular Biology Organization, Calouste Gulbenkian Foundation, Agencia Estatal de Investigación
المصدر: Biological Imaging ; volume 4 ; ISSN 2633-903X
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17Academic Journal
المؤلفون: Hanson, Alison, Reme, Raphael, Telerman, Noah, Yamamoto, Wataru, Olivo-Marin, Jean-Christophe, Lagache, Thibault, Yuste, Rafael
المساهمون: Columbia University New York, Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), This research was supported by the Leon Levy Fellowship in Neuroscience and K99 NS127851 (A.H.), French ANR-PRCI “Rebirth” (T.L. and R.R.) and the NSF (2203119, WY, NT, RY) Vannevar Bush Faculty Award (ONR N000142012828, WY, NT, RY)., ANR-21-CE45-0020,REBIRTH,Comprendre l'auto-assemblage du système nerveux de l'Hydre(2021)
المصدر: ISSN: 2045-2322.
مصطلحات موضوعية: [SDV]Life Sciences [q-bio]
Relation: info:eu-repo/semantics/altIdentifier/pmid/38429381; pasteur-04626604; https://pasteur.hal.science/pasteur-04626604; https://pasteur.hal.science/pasteur-04626604v2/document; https://pasteur.hal.science/pasteur-04626604v2/file/s41598-024-55608-2.pdf; PUBMED: 38429381; PUBMEDCENTRAL: PMC10907378
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18Academic Journal
المؤلفون: García López de Haro, Carlos, Dallongeville, Stéphane, Musset, Thomas, Gómez-De-Mariscal, Estibaliz, Sage, Daniel, Ouyang, Wei, Muñoz-Barrutia, Arrate, Tinevez, Jean-Yves, Olivo-Marin, Jean-Christophe
المساهمون: Analyse d'images biologiques - Biological Image Analysis (BIA), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Instituto Gulbenkian de Ciência Oeiras (IGC), Fundação Calouste Gulbenkian, Ecole Polytechnique Fédérale de Lausanne (EPFL), KTH Royal Institute of Technology Stockholm (KTH), Universidad Carlos III de Madrid Madrid (UC3M), work has been partially supported by the Agence Nationale de la Recherche through the LabEx IBEID (ANR-10-LABX-62-IBEID), the Institut Carnot Pasteur Microbes & Santé (ANR 16 CARN 0023-01), the programs PIA INCEPTION (ANR-16-CONV-0005) and France-BioImaging (ANR-10-INBS-04), by DIM ELICIT Région Ile-de-France, by the European Commission through the H2020-FET-OPEN-2018–2019-2020-01 grant no. 862840 (“FREE@POC”) (J.-C.O.-M.), by additional internal funding from the Bioimage Analysis unit and the Institut Pasteur (J.-C.O.-M. and J.-Y.T.), by the Ministerio de Ciencia, Innovación y Universidades, Agencia Estatal de Investigación, under grant PID2019-109820RB-I00, MCIN / AEI / 10.13039/501100011033/, co-financed by European Regional Development Fund (ERDF), “A way of making Europe,” and the European Commission through the Horizon Europe program (AI4LIFE project, grant agreement 101057970-AI4LIFE) (A.M.-B.), and by Fundação Calouste Gulbenkian and EMBO Postdoctoral Fellowship (EMBO ALTF 174-2022) (E.G.M.)., ANR-16-CONV-0005,INCEPTION,Institut Convergences pour l'étude de l'Emergence des Pathologies au Travers des Individus et des populatiONs(2016), ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), ANR-10-INBS-0004,France-BioImaging,Développment d'une infrastructure française distribuée coordonnée(2010), European Project: 862840,H2020-FETOPEN-2018-2019-2020-01,FreeATPOC(2020), European Project: 101057970,HORIZON-INFRA-2021-SERV-01,AI4LIFE(2022)
المصدر: ISSN: 1548-7091.
مصطلحات موضوعية: [INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing
Relation: info:eu-repo/semantics/altIdentifier/pmid/38191929; info:eu-repo/grantAgreement//862840/EU/Towards an instrument-free future of molecular diagnostics at the point-of-care/FreeATPOC; info:eu-repo/grantAgreement//101057970/EU/Artificial Intelligence for Image Data Analysis in the Life Sciences/AI4LIFE; PUBMED: 38191929
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19Academic Journal
المؤلفون: Rodríguez-Cruz, Daniela, Boquet-Pujadas, Aleix, López-Muñoz, Eunice, Rincón-Heredia, Ruth, Paredes-Díaz, Rodolfo, Flores-Fortis, Mauricio, Olivo-Marin, Jean-Christophe, Guillén, Nancy, Aguilar-Rojas, Arturo
المصدر: Frontiers in Cell and Developmental Biology ; volume 12 ; ISSN 2296-634X
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20Academic Journal
المؤلفون: Salavessa, Laura, Lagache, Thibault, Malardé, Valérie, Grassart, Alexandre, Olivo-Marin, Jean-Christophe, Canette, Alexis, Trichet, Michael, Sansonetti, Philippe J., Sauvonnet, Nathalie
المصدر: Proceedings of the National Academy of Sciences of the United States of America, 2021 Sep . 118(37), 1-12.
URL الوصول: https://www.jstor.org/stable/27075746
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