المؤلفون: João N. C. Especial (11061853), Patrícia F. N. Faísca (11061856)

مصطلحات موضوعية: Biophysics, Biochemistry, Medicine, Molecular Biology, Ecology, Sociology, Marine Biology, Mental Health, Hematology, Plant Biology, Virology, Biological Sciences not elsewhere classified, Physical Sciences not elsewhere classified, non-native interactions drive, nonlocal non-native interactions, protein, Heterogeneous Native Interactions Y., contact formation, non-native interactions, Monte Carlo simulations

Relation: https://figshare.com/articles/journal_contribution/A_Specific_Set_of_Heterogeneous_Native_Interactions_Yields_Efficient_Knotting_in_Protein_Folding/14896867

الاتاحة: https://doi.org/10.1021/acs.jpcb.1c03127.s001

المؤلفون: Hewafonsekage Yasan Y. Fonseka (10953222), Alex Javidi (10953225), Luiz F. L. Oliveira (3214437), Cristian Micheletti (178159), George Stan (843728)

مصطلحات موضوعية: Biophysics, Biochemistry, Genetics, Biotechnology, Evolutionary Biology, Computational Biology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, Information Systems not elsewhere classified, intramolecular contacts, 6 1, address aspects, ClpY ATPase, translocation processivity, Topology Revealed, Synergistic Contribution, Molecular Dynamics Simulations, sequence-dependent effects, use Langevin dynamics simulations, i.e, topology, non-native interactions, allosteric translocating cycles, proteins representative, polypeptide chain, protein structure, translocation hindrance, atomistic detail, Primary Sequence

Relation: https://figshare.com/articles/journal_contribution/Unfolding_and_Translocation_of_Knotted_Proteins_by_Clp_Biological_Nanomachines_Synergistic_Contribution_of_Primary_Sequence_and_Topology_Revealed_by_Molecular_Dynamics_Simulations/14762886

الاتاحة: https://doi.org/10.1021/acs.jpcb.1c00898.s001

المؤلفون: Sandhya Bhatia (3621014), Guruswamy Krishnamoorthy (9973444), Jayant B. Udgaonkar (1587634)

مصطلحات موضوعية: Biophysics, Biochemistry, Medicine, Neuroscience, Biotechnology, Computational Biology, Chemical Sciences not elsewhere classified, Physical Sciences not elsewhere classified, Resolving Site-Specific Heterogeneity, population-averaged size, misfolding reactions, Multisite measurements, β- sheet decreases, intrachain motions, subensemble, chain collapse, α- helix, Unfolded State, polypeptide chain collapse, multisite time-resolved FRET method., non-native interactions, contraction

Relation: https://figshare.com/articles/journal_contribution/Resolving_Site-Specific_Heterogeneity_of_the_Unfolded_State_under_Folding_Conditions/14312258

الاتاحة: https://doi.org/10.1021/acs.jpclett.1c00098.s001

المؤلفون: Roberto Covino, Tatjana Škrbić, Silvio a Beccara, Pietro Faccioli, Cristian Micheletti

المصدر: Biomolecules, Vol 4, Iss 1, Pp 1-19 (2013)

مصطلحات موضوعية: knotted proteins, folding simulations, non-native interactions, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: http://www.mdpi.com/2218-273X/4/1/1; https://doaj.org/toc/2218-273X

URL الوصول: https://doaj.org/article/dd62655e8fd84035a90081a6f5d80dab

المؤلفون: Roberto Covino, Silvio A Beccara, Pietro Faccioli, Cristian Micheletti

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://www.mdpi.com/2218-273X/4/1/1/pdf/.

مصطلحات موضوعية: knotted proteins, folding simulations, non-native interactions

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.431.9718; http://www.mdpi.com/2218-273X/4/1/1/pdf/

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.431.9718
http://www.mdpi.com/2218-273X/4/1/1/pdf/

المؤلفون: Muff, S, Caflisch, A

المصدر: Muff, S; Caflisch, A (2008). Kinetic analysis of molecular dynamics simulations reveals changes in the denatured state and switch of folding pathways upon single-point mutation of a beta-sheet miniprotein. Proteins, 70(4):1185-1195.

مصطلحات موضوعية: Department of Biochemistry, 570 Life sciences, biology, complex network • non-native interactions • transition state • multiple folding pathways • free-energy surface

وصف الملف: application/pdf

Relation: https://www.zora.uzh.ch/id/eprint/4461/32/Muff_Proteins_2008V.pdf; https://www.zora.uzh.ch/id/eprint/4461/37/Muff_fulltextV.pdf; info:pmid/17847092; urn:issn:0887-3585

الاتاحة: https://www.zora.uzh.ch/id/eprint/4461/
https://www.zora.uzh.ch/id/eprint/4461/32/Muff_Proteins_2008V.pdf
https://www.zora.uzh.ch/id/eprint/4461/37/Muff_fulltextV.pdf
https://doi.org/10.1002/prot.21565

المؤلفون: Ruzmetov, Talant A.

مصطلحات موضوعية: Biophysics, Physics, Disordered Proteins, Structure Based Model, Desolvation Barrier, Fly-casting, Internal Friction, Non-native interactions, Encounter Complex, Conformational Dynamics

الاتاحة: http://rave.ohiolink.edu/etdc/view?acc_num=kent1564588247414425

المؤلفون: Ruzmetov, Talant A

المصدر: http://rave.ohiolink.edu/etdc/view?acc_num=kent1564588247414425.

مصطلحات موضوعية: Biophysics, Physics, Disordered Proteins, Structure Based Model, Desolvation Barrier, Fly-casting, Internal Friction, Non-native interactions, Encounter Complex, Conformational Dynamics

Relation: http://rave.ohiolink.edu/etdc/view?acc_num=kent1564588247414425

الاتاحة: http://rave.ohiolink.edu/etdc/view?acc_num=kent1564588247414425

المؤلفون: Johnson, Daniel J., Flory, S. Luke, Shelton, Angela, Huebner, Cynthia, Clay, Keith

مصطلحات موضوعية: competition, forest management, herbivores, invasion ecology, native-non-native interactions, species interactions, tree seedlings

جغرافية الموضوع: Indiana, USA

Relation: Johnson DJ, Flory SL, Shelton A, Huebner C, Clay K (2015) Interactive effects of a non-native invasive grass Microstegium vimineum and herbivore exclusion on experimental tree regeneration under differing forest management. Journal of Applied Ecology 210-219.; http://hdl.handle.net/10255/dryad.70492

الاتاحة: http://hdl.handle.net/10255/dryad.70492
https://doi.org/10.5061/dryad.rf14r

المؤلفون: Kimura, Sachie, Caldarini, Martina, Broglia, Ricardo A., Dokholyan, Nikolay V., Tiana, Guido

المصدر: Kimura , S , Caldarini , M , Broglia , R A , Dokholyan , N V & Tiana , G 2014 , ' The maturation of HIV-1 protease precursor studied by discrete molecular dynamics ' , Proteins: Structure, Function, and Bioinformatics , vol. 82 , no. 4 , pp. 633-639 . https://doi.org/10.1002/prot.24440

مصطلحات موضوعية: protein dimerization, MD simulations, computational model, equilibrium properties, non-native interactions

الاتاحة: https://researchprofiles.ku.dk/da/publications/the-maturation-of-hiv1-protease-precursor-studied-by-discrete-molecular-dynamics(dcd68d49-1587-40f3-8111-1625a74005d6).html
https://doi.org/10.1002/prot.24440

المؤلفون: Kimura, Sachie, Caldarini, Martina, Broglia, Ricardo A., Dokholyan, Nikolay V., Tiana, Guido

المصدر: Proteins - Structure, Function and Bioinformatics, 82(4)

مصطلحات موضوعية: Calorimetry, Nuclear Magnetic Resonance, Biomolecular, equilibrium properties, Protein Folding, protein dimerization, MD simulations, Protein Multimerization, Protein Conformation, HIV-1, HIV Protease, non-native interactions, Models, Molecular, Enzyme Precursors, Molecular Dynamics Simulation, computational model, Protein Structure, Quaternary

Relation: https://doi.org/10.17615/kehv-dr34; https://cdr.lib.unc.edu/downloads/02871420d?file=thumbnail; https://cdr.lib.unc.edu/downloads/02871420d

الاتاحة: https://doi.org/10.17615/kehv-dr34
https://cdr.lib.unc.edu/downloads/02871420d?file=thumbnail
https://cdr.lib.unc.edu/downloads/02871420d

المؤلفون: S. a Beccara, Pietro Faccioli, Cristian Micheletti, Roberto Covino, Tatjana Škrbić

المساهمون: Covino, R, Skrbić, T, Beccara, S, Faccioli, P, Micheletti, C

المصدر: Biomolecules; Volume 4; Issue 1; Pages: 1-19
Biomolecules, Vol 4, Iss 1, Pp 1-19 (2013)
Biomolecules

مصطلحات موضوعية: Engineering, Protein Folding, folding simulations, lcsh:QR1-502, Nanotechnology, Computational biology, knotted proteins, non-native interactions, Protein aggregation, Molecular Dynamics Simulation, chemistry, Biochemistry, Article, lcsh:Microbiology, Protein location, Settore FIS/03 - Fisica della Materia, Molecular dynamics, Protein Aggregates, stomatognathic system, knotted protein, Animals, Humans, animal, folding simulation, human, Molecular Biology, Proteins, business.industry, protein, protein aggregate, molecular dynamics, protein folding, Robustness (evolution), food and beverages, Folding (chemistry), Protein model, Protein folding, business

وصف الملف: ELETTRONICO; application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::249ec633a324832657d9808b565acf45
https://hdl.handle.net/10281/405574

مصطلحات موضوعية: competition, forest management, herbivores, invasion ecology, native-non-native interactions, species interactions, tree seedlings

جغرافية الموضوع: Indiana, USA

Relation: http://hdl.handle.net/10255/dryad.70493

الاتاحة: http://hdl.handle.net/10255/dryad.70493
https://doi.org/10.5061/dryad.rf14r/1

المؤلفون: Curcio R., Caflisch A., Paci E.

المساهمون: Curcio R., Caflisch A., Paci E.

مصطلحات موضوعية: Antibody-hapten complex, Atomic force microscopy, Forced unbinding, Molecular dynamic, Non-native interactions

وصف الملف: STAMPA

Relation: volume:14; issue:10; firstpage:2499; lastpage:2514; numberofpages:16; journal:PROTEIN SCIENCE; http://hdl.handle.net/11585/886275; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-25844493057

الاتاحة: http://hdl.handle.net/11585/886275
https://doi.org/10.1110/ps.041280705

المؤلفون: MacKenzie, Duncan

مصطلحات موضوعية: nuclear magnetic resonance, myristoylation, switch protein, hisactophilin, temperature dependence, biophysics, pH-dependence, energy landscape, local protien stability, global protien stability, chemical shift, reverse micelle, non-native interactions, protein folding

Relation: http://hdl.handle.net/10012/14678

الاتاحة: http://hdl.handle.net/10012/14678

المؤلفون: Linneweber, Judith

مصطلحات موضوعية: disagreement, negotiation process, aber, native non-native interactions, Intercultural German Studies

Relation: http://hdl.handle.net/10012/8773

الاتاحة: http://hdl.handle.net/10012/8773

المؤلفون: Estanga Mollica, María Eugenia, Schmidt, Romina M., Cock, Marina Cecilia, Hierro, Jose Luis

مصطلحات موضوعية: CENTRAL ARGENTINA, CHENOPODIUM ALBUM, COEXISTENCE, COMMUNITY-LEVEL FACILITATION, NATIVE-NON-NATIVE INTERACTIONS, PROSOPIS CALDENIA, https://purl.org/becyt/ford/1.6, https://purl.org/becyt/ford/1

وصف الملف: application/pdf

Relation: info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/10.1007/s10530-021-02538-z; http://hdl.handle.net/11336/183880; Estanga Mollica, María Eugenia; Schmidt, Romina M.; Cock, Marina Cecilia; Hierro, Jose Luis; Non-native weed reaches community dominance under the canopy of dominant native tree; Springer; Biological Invasions; 23; 9; 9-2021; 2849-2861; CONICET Digital; CONICET

الاتاحة: http://hdl.handle.net/11336/183880

المؤلفون: Covino, R, Skrbić, T, Beccara, S, Faccioli, P, Micheletti, C, Beccara, SA

مصطلحات الفهرس: knotted protein, folding simulation, non-native interactions, info:eu-repo/semantics/article

URL: https://hdl.handle.net/10281/405574
info:eu-repo/semantics/altIdentifier/pmid/24970203
volume:4
issue:1
firstpage:1
lastpage:19
numberofpages:19
journal:BIOMOLECULES