المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/journal_contribution/Description_of_variants_found_in_90_SARS-CoV-2_isolates_from_Pakistan_/16548768

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.s007

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/dataset/Description_of_SARS-CoV-2_cases_from_Pakistan_/16548762

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.s006

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Genome-wide_site-by-site_selection_pressure_analysis_for_sequences_from_GH_clade_/16548753

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.s003

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Provincial_distribution_of_SARS-CoV-2_clades_identified_between_March_and_October_2020_/16548750

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.s002

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Genome-wide_site-by-site_selection_pressure_analysis_for_sequences_from_L_clade_/16548759

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.s005

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Temporal_distribution_of_SARS-CoV-2_clades_identified_between_March_and_October_2020_/16548747

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.s001

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Genome-wide_site-by-site_selection_pressure_analysis_for_sequences_from_prevalent_clades_GR_clade_/16548756

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.s004

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/dataset/Accession_numbers_of_samples_used_for_phylogenetic_analysis_in_Fig_1_/16548774

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.s008

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Maximum-Likelihood_phylogenetic_tree_of_SARS-CoV-2_sequences_from_Karachi_/16548780

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.g001

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Time-resolved_phylogenetic_distribution_of_genomic_epidemiology_of_SAR-CoV-2_focused_on_Asian_subsampling_Screenshot_of_the_current_Nextstrain_display_in_SVG_format_are_protected_by_CC-BY_license_/16548786

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.g002

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Genetic_variants_found_in_SARS-CoV-2_genomes_/16548801

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.g004

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Genome-wide_site-by-site_entropy_analysis_for_SARS-CoV-2_sequences_from_before_and_after_June_2020_/16548807

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.g005

المؤلفون: Najia Karim Ghanchi (10537554), Asghar Nasir (108748), Kiran Iqbal Masood (11361849), Syed Hani Abidi (11361852), Syed Faisal Mahmood (11287566), Akbar Kanji (207425), Safina Razzak (7111187), Waqasuddin Khan (453320), Saba Shahid (9013928), Maliha Yameen (11361855), Ali Raza (3558965), Javaria Ashraf (5259980), Zeeshan Ansar (9942372), Mohammad Buksh Dharejo (11361858), Nazneen Islam (11361861), Zahra Hasan (73921), Rumina Hasan (73926)

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Evolutionary Biology, Ecology, Infectious Diseases, Virology, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, would likely lead, sup >&# 8722, spike glycoprotein d614g, matched pakistani isolates, islamabad capital territory, overall higher mean, rna substitution rates, global strains except, studied ninety sars, 36 ), higher across gh, whole genome sequences, june 2020 exhibited, 2 genomes clustered, pakistan , higher entropy observed, 4 ), 2 strains isolated, higher entropy

Relation: https://figshare.com/articles/figure/Genome-wide_site-by-site_selection_pressure_analysis_for_SARS-CoV-2_sequences_from_before_and_after_June_2020_/16548816

الاتاحة: https://doi.org/10.1371/journal.pone.0256451.g007