المؤلفون: Aviv Regev, Sarah A Teichmann, Eric S Lander, Ido Amit, Christophe Benoist, Ewan Birney, Bernd Bodenmiller, Peter Campbell, Piero Carninci, Menna Clatworthy, Hans Clevers, Bart Deplancke, Ian Dunham, James Eberwine, Roland Eils, Wolfgang Enard, Andrew Farmer, Lars Fugger, Berthold Göttgens, Nir Hacohen, Muzlifah Haniffa, Martin Hemberg, Seung Kim, Paul Klenerman, Arnold Kriegstein, Ed Lein, Sten Linnarsson, Emma Lundberg, Joakim Lundeberg, Partha Majumder, John C Marioni, Miriam Merad, Musa Mhlanga, Martijn Nawijn, Mihai Netea, Garry Nolan, Dana Pe'er, Anthony Phillipakis, Chris P Ponting, Stephen Quake, Wolf Reik, Orit Rozenblatt-Rosen, Joshua Sanes, Rahul Satija, Ton N Schumacher, Alex Shalek, Ehud Shapiro, Padmanee Sharma, Jay W Shin, Oliver Stegle, Michael Stratton, Michael J T Stubbington, Fabian J Theis, Matthias Uhlen, Alexander van Oudenaarden, Allon Wagner, Fiona Watt, Jonathan Weissman, Barbara Wold, Ramnik Xavier, Nir Yosef, Human Cell Atlas Meeting Participants

المصدر: eLife, Vol 6 (2017)

مصطلحات موضوعية: single-cell genomics, lineage, cell atlas, science forum, Medicine, Science, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://elifesciences.org/articles/27041; https://doaj.org/toc/2050-084X

URL الوصول: https://doaj.org/article/f765a09444c745e089e255ad5929e151

المؤلفون: Xin Xie, Michael J T Stubbington, Jesper K Nissen, Kristian G Andersen, Daniel Hebenstreit, Sarah A Teichmann, Alexander G Betz

المصدر: PLoS Genetics, Vol 11, Iss 6, p e1005251 (2015)

مصطلحات موضوعية: Genetics, QH426-470

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC4480970?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

URL الوصول: https://doaj.org/article/1927f9382a6942bd9ea0e2d978c99bcc

المؤلفون: Aisha Souquette, Stefan A. Schattgen, Alvaro Martinez Barrio, Michael J. T. Stubbington, Jeremy Chase Crawford, Paul G. Thomas, Kate Guion, Philip Bradley

المصدر: Nat Biotechnol

مصطلحات موضوعية: Power graph analysis, education.field_of_study, T cell, Receptors, Antigen, T-Cell, alpha-beta, T-cell receptor, Population, Biomedical Engineering, Receptors, Antigen, T-Cell, Bioengineering, chemical and pharmacologic phenomena, Cell Differentiation, Computational biology, Biology, CD8-Positive T-Lymphocytes, Applied Microbiology and Biotechnology, Phenotype, Article, medicine.anatomical_structure, Gene expression, medicine, Molecular Medicine, education, CD8, Biotechnology, Sequence (medicine)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::75d39fe4d639c690c40cdaa3a8feb3fc
https://europepmc.org/articles/PMC8832949/

المؤلفون: Amanda, Baizan-Edge, Bryony A, Stubbs, Michael J T, Stubbington, Daniel J, Bolland, Kristina, Tabbada, Simon, Andrews, Anne E, Corcoran

المصدر: Cell Reports

مصطلحات موضوعية: antisense transcription, bone marrow, Transcription, Genetic, Genes, Immunoglobulin Heavy Chain, Immunoglobulin Variable Region, chemical and pharmacologic phenomena, Fetus, Report, Animals, Cell Lineage, Pax5 transcription factor, Nucleotide Motifs, B-Lymphocytes, Receptors, Interleukin-7, Base Sequence, Chromatin, Mice, Inbred C57BL, B lymphocyte development, Liver, chromatin accessibility, Igh recombination, interleukin-7 receptor signaling, Trans-Activators, pro-B cells, DNA, Intergenic, Antibody Diversity, Signal Transduction, fetal liver

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::c96df32c9acda207a41786517de07f0c
https://pubmed.ncbi.nlm.nih.gov/34260907

المؤلفون: Kristina Tabbada, Anne E. Corcoran, Daniel J. Bolland, Amanda Baizan-Edge, Simon Andrews, Bryony A. Stubbs, Michael J. T. Stubbington

مصطلحات موضوعية: Transcriptome, medicine.anatomical_structure, Transcription (biology), medicine, Immunoglobulin heavy chain, Antibody Diversity, Epigenetics, Biology, Gene, Transcription factor, B cell, Cell biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::d54b6d2aa913ae09ff39a2ef6b94fb2e
https://doi.org/10.1101/2020.09.24.298000

المؤلفون: Stefan A. Schattgen, Jeremy Chase Crawford, Michael J. T. Stubbington, Aisha Souquette, Kate Guion, Paul G. Thomas, Alvaro Martinez Barrio, Philip Bradley

مصطلحات موضوعية: education.field_of_study, Lineage (genetic), biology, T cell, Population, T-cell receptor, Computational biology, Major histocompatibility complex, Phenotype, medicine.anatomical_structure, medicine, biology.protein, education, Gene, CD8

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::cbd7cabfe2edd16fa7330ea176ed6514
https://doi.org/10.1101/2020.06.04.134536

المؤلفون: Chung-Chau Hon, Jay W. Shin, Michael J. T. Stubbington, Piero Carninci

المصدر: Briefings in Functional Genomics

مصطلحات موضوعية: 0301 basic medicine, Databases, Factual, Sequence Analysis, RNA, Gene Expression Profiling, Human Cell Atlas, RNA sequencing, General Medicine, bioinformatics, Biology, Human cell, Biochemistry, Data science, single cell, Clinical Practice, 03 medical and health sciences, 030104 developmental biology, Papers, Genetics, Humans, Single-Cell Analysis, Molecular Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::73ae6627c3331268622f229ed990a8cc
http://europepmc.org/articles/PMC6063304

المؤلفون: Tapio Lönnberg, Michael J. T. Stubbington

المصدر: Immunology & Cell Biology. 97:241-243

مصطلحات موضوعية: Colorectal cancer, medicine.medical_treatment, Immunology, Cell, Receptors, Antigen, T-Cell, Biology, 03 medical and health sciences, Lymphocytes, Tumor-Infiltrating, 0302 clinical medicine, Single-cell analysis, Antigen, T-Lymphocyte Subsets, Tumor Microenvironment, medicine, Humans, Immunology and Allergy, 030304 developmental biology, 0303 health sciences, Tumor microenvironment, Gene Expression Profiling, Cell Biology, Immunotherapy, medicine.disease, Gene expression profiling, medicine.anatomical_structure, Tumor Escape, Cancer research, Single-Cell Analysis, Colorectal Neoplasms, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c8ec369807cf9daa7146a56f2d8156a7
https://doi.org/10.1111/imcb.12240

المؤلفون: Kristina Tabbada, Amanda Baizan-Edge, Simon Andrews, Daniel J. Bolland, Michael J. T. Stubbington, Anne E. Corcoran, Bryony A. Stubbs

المصدر: SSRN Electronic Journal.

مصطلحات موضوعية: Transcriptome, medicine.anatomical_structure, Transcription (biology), Repertoire, medicine, Immunoglobulin heavy chain, Antibody Diversity, Biology, Gene, Transcription factor, B cell, Cell biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::6aaf56b490bb7034322c19377c0b1008
https://doi.org/10.2139/ssrn.3751673

المؤلفون: Charlotte A. Darby, Alvaro Martinez Barrio, Michael J. T. Stubbington, Ian T. Fiddes, Patrick Marks

المصدر: Bioinformatics

مصطلحات موضوعية: Statistics and Probability, Cell type, Cell, Antigen presentation, Gene Expression, Computational biology, Hla expression, Human leukocyte antigen, Biology, Major histocompatibility complex, medicine.disease_cause, Biochemistry, Workflow, 03 medical and health sciences, 0302 clinical medicine, Immune system, Genotype, Gene expression, medicine, Humans, Molecular Biology, Gene, Allele specific, Alleles, 030304 developmental biology, Genetics, 0303 health sciences, Mutation, Sequence Analysis, RNA, RNA, Applications Notes, Computer Science Applications, Computational Mathematics, medicine.anatomical_structure, Computational Theory and Mathematics, biology.protein, Single-Cell Analysis, 030217 neurology & neurosurgery, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4cb17ea0e834d9a5b7f62ae5293addab
https://pubmed.ncbi.nlm.nih.gov/32330223

المؤلفون: Ben Millar, Laura Jardine, Rachel Rowell, Gary Reynolds, Sarah A. Teichmann, Anindita Roy, Orit Rozenblatt-Rosen, Emily Stephenson, Elisa Laurenti, Michal Slyper, Issac Goh, Aviv Regev, Frankie Greig, Lira Mamanova, Orr Ashenberg, Monika S. Kowalczyk, Barbara A. Innes, Jong-Eun Park, David McDonald, Berthold Göttgens, Corina Moldovan, Kile Green, Matthew D. Young, Danielle Dionne, Peter D. Carey, Irene Roberts, Mirjana Efremova, Zhichao Miao, Rachel A. Botting, Alain Chédotal, Simone Webb, Bo Li, Elizabeth Poyner, Steven Lisgo, Marcin Tabaka, Peter Vegh, Andrew Fuller, Yorick Gitton, Roser Vento-Tormo, Susan Lindsay, David Dixon, Sam Behjati, Meghan Acres, Alexandra-Chloé Villani, Michael J. T. Stubbington, Jaume Bacardit, Emily Calderbank, Dorin-Mirel Popescu, Daniel Maunder, Krzysztof Polanski, James Fletcher, Michael W. Mather, Kerstin B. Meyer, Timothy L. Tickle, Andrew Filby, Muzlifah Haniffa

المساهمون: Calderbank, Emily [0000-0002-9559-6593], Gottgens, Berthold [0000-0001-6302-5705], Laurenti, Elisa [0000-0002-9917-9092], Teichmann, Sarah [0000-0002-6294-6366], Apollo - University of Cambridge Repository, Institute of Cellular Medicine [Newcastle], Newcastle University [Newcastle], The Wellcome Trust Sanger Institute [Cambridge], Institut de la Vision, Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Institut National de la Santé et de la Recherche Médicale (INSERM), Newcastle Upon Tyne Hospitals NHS Foundation Trust, Institute of Genetic Medicine [Newcastle], School of Computing Science [Newcastle], Broad Institute of MIT and Harvard (BROAD INSTITUTE), Harvard Medical School [Boston] (HMS)-Massachusetts Institute of Technology (MIT)-Massachusetts General Hospital [Boston], The Weatherall Institute of Molecular Medicine, University of Oxford [Oxford], Structure des macromolécules biologiques et mécanismes de reconnaissance (SMBMR), Centre National de la Recherche Scientifique (CNRS), NIHR Liver Biomedical Research Unit, University of Birmingham [Birmingham], Institute of Genetic Medicine, Analyse de données, Modélisation et Apprentissage automatique [Grenoble] (AMA ), Laboratoire d'Informatique de Grenoble (LIG ), Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019]), Neurobiologie des processus adaptatifs (NPA), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), University of Cambridge [UK] (CAM), Ludwig Institute for Cancer Research Ltd.

المصدر: Nature
Nature, Nature Publishing Group, 2019, 574, pp.365-371. ⟨10.1038/s41586-019-1652-y⟩
Nature, Nature Publishing Group, 2019, 574 (7778), pp.365-371. ⟨10.1038/s41586-019-1652-y⟩

مصطلحات موضوعية: 0301 basic medicine, skin, kidney, Liver cytology, Lymphoid Tissue, [SDV]Life Sciences [q-bio], Population, Biology, Article, immunology, 03 medical and health sciences, 0302 clinical medicine, Immune system, Fetus, medicine, Humans, Yolk sac, Progenitor cell, education, yolk-sac, education.field_of_study, Multidisciplinary, Blood Cells, Gene Expression Profiling, Stem Cells, haematopoiesis, Flow Cytometry, 3. Good health, Cell biology, single cell RNA-sequencing, Hematopoiesis, Haematopoiesis, 030104 developmental biology, medicine.anatomical_structure, human development, Cellular Microenvironment, Liver, 030220 oncology & carcinogenesis, embryonic structures, Erythropoiesis, Female, Stem cell, Single-Cell Analysis

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cdd2c8813ac4ea92ac6e1ca1e722aab2
https://www.repository.cam.ac.uk/handle/1810/297663

المؤلفون: Anna Wilbrey-Clark, Minal Patel, John R. Ferdinand, Monika Dabrowska, Oliver Stegle, Sarah A. Teichmann, A. Tsingene, Nikitas Georgakopoulos, Ricardo J. Miragaia, Karol Nowicki-Osuch, Elo Madissoon, Michael J. T. Stubbington, Kourosh Saeb-Parsy, Philippa Harding, Krzysztof Polanski, Krishnaa T. Mahbubani, Kerstin B. Meyer, Rebecca C. Fitzgerald, S. van Dongen, Menna R. Clatworthy, Kevin W. Loudon

مصطلحات موضوعية: 0303 health sciences, Cell type, Tissue Preservation, 030302 biochemistry & molecular biology, Cell, Cold storage, Spleen, Computational biology, Biology, Transcriptome, 03 medical and health sciences, medicine.anatomical_structure, medicine, Viability assay, Sample collection, 030304 developmental biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::02927ac698a4cd5909e8519a768f2cd0
https://doi.org/10.1101/741405

المؤلفون: Orit Rozenblatt-Rosen, Dorin-Mirel Popescu, Aviv Regev, James Fletcher, Michael W. Mather, Daniel Maunder, Peter Vegh, Timothy L. Tickle, Mirjana Efremova, Krzysztof Polanski, Berthold Göttgens, Danielle Dionne, Emily Stephenson, Kile Green, Andrew Filby, Corina Moldovan, Emily Calderbank, Elizabeth Poyner, Meghan Acres, Kerstin B. Meyer, Steven Lisgo, Barbara A. Innes, Irene Roberts, Michal Slyper, Monika S. Kowalczyk, Matthew D. Young, Elisa Laurenti, Gary Reynolds, Roser Vento-Tormo, Alain Chédotal, Rachel Rowell, Sarah A. Teichmann, Lira Mamanova, Yorick Gitton, Zhichao Miao, Anindita Roy, Sam Behjati, Marcin Tabaka, Laura Jardine, Alexandra-Chloé Villani, Andrew Fuller, Bo Li, Muzlifah Haniffa, Rachel A. Botting, Jaume Bacardit, David McDonald, Issac Goh, Michael J. T. Stubbington, Ben Millar, Jong-Eun Park, Orr Ashenbrg, Frankie Greig, Susan Lindsay, David Dixon

مصطلحات موضوعية: Haematopoiesis, Fetus, Mast cell differentiation, Immune system, Cell growth, Erythropoiesis, Stem cell, Biology, Progenitor cell, Cell biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::509c8ddea921f603c80c752eef672f1c

المؤلفون: Xi Chen, Michael J. T. Stubbington, J. Christopher Love, Valentine Svensson, Nicholas Navin, Lior Pachter, Jonathan V. Sweedler, Sarah A. Teichmann

المصدر: Nature Biotechnology. 34:1111-1118

مصطلحات موضوعية: 0301 basic medicine, Sequence analysis, Microfluidics, Biomedical Engineering, Bioengineering, Computational biology, 010402 general chemistry, 01 natural sciences, Applied Microbiology and Biotechnology, 03 medical and health sciences, Metabolomics, Text mining, Single-cell analysis, Metabolome, Reference standards, Sequence Analysis, RNA, Chemistry, business.industry, Reference Standards, 0104 chemical sciences, 030104 developmental biology, Molecular Medicine, Single-Cell Analysis, Artifacts, business, Algorithms, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::af21122467aafcc6193437641ea9f802
https://doi.org/10.1038/nbt.3721

المؤلفون: Simon Andrews, Andrew L. Wood, Amanda Baizan-Edge, Hashem Koohy, Felix Krueger, Daniel J. Bolland, Mikhail Spivakov, Kristina Tabbada, Louise S. Matheson, Peter Chovanec, Anne E. Corcoran, Bryony A. Stubbs, Michael J. T. Stubbington

المصدر: Cell Reports
Cell Reports, Vol 15, Iss 11, Pp 2475-2487 (2016)

مصطلحات موضوعية: 0301 basic medicine, Transcription, Genetic, Sequence analysis, Immunoglobulin Variable Region, Biology, General Biochemistry, Genetics and Molecular Biology, Article, Epigenesis, Genetic, Evolution, Molecular, 03 medical and health sciences, chemistry.chemical_compound, Mice, 0302 clinical medicine, Animals, Humans, lcsh:QH301-705.5, Gene, Regulation of gene expression, Genetics, Homeodomain Proteins, V(D)J recombination, Sequence Analysis, DNA, Chromatin, V(D)J Recombination, Receptors, Antigen, 030104 developmental biology, lcsh:Biology (General), chemistry, Gene Expression Regulation, CTCF, Genetic Loci, Immunoglobulin Heavy Chains, Recombination, DNA, Algorithms, 030215 immunology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1bafc076a00f9ae1dd289efc37c33575
http://europepmc.org/articles/PMC4914699

المؤلفون: Valentina Proserpio, Anneliese O. Speak, Tapio Lönnberg, Michael J. T. Stubbington, Sarah A. Teichmann, Simon Clare, Gordon Dougan

المساهمون: Speak, Anneliese [0000-0003-4890-4685], Dougan, Gordon [0000-0003-0022-965X], Teichmann, Sarah [0000-0002-6294-6366], Apollo - University of Cambridge Repository

المصدر: Nature methods
Nature Methods

مصطلحات موضوعية: CD4-Positive T-Lymphocytes, 0301 basic medicine, T cell, Cell, Receptors, Antigen, T-Cell, Biology, Lymphocyte Activation, Biochemistry, Article, Transcriptome, Mice, 03 medical and health sciences, Single-cell analysis, Antigen, Salmonella, medicine, Animals, Molecular Biology, Genetics, Salmonella Infections, Animal, T-cell receptor, High-Throughput Nucleotide Sequencing, Cell Biology, T lymphocyte, Acquired immune system, Cell biology, 030104 developmental biology, medicine.anatomical_structure, Single-Cell Analysis, Software, Biotechnology

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c9463da2b7ebe54d0c87139ea4c82505
https://doi.org/10.1038/nmeth.3800

المؤلفون: Sarah A. Teichmann, Michael J. T. Stubbington, Aviv Regev, Orit Rozenblatt-Rosen

المصدر: Nature. 550:451-453

مصطلحات موضوعية: 0301 basic medicine, Multidisciplinary, Atlas (topology), Computer science, International Cooperation, Atlases as Topic, Cell Biology, Human body, Human cell, World Wide Web, 03 medical and health sciences, 030104 developmental biology, Cell Tracking, Open Access Publishing, Open access publishing, Key (cryptography), Humans, Whole Body Imaging, Cell tracking

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::87abcdf6b55309bee560df04804d31d6
https://doi.org/10.1038/550451a

المؤلفون: Ida, Lindeman, Michael J T, Stubbington

المصدر: Methods in molecular biology (Clifton, N.J.). 1935

مصطلحات موضوعية: Receptors, Antigen, Sequence Analysis, RNA, RNA, Small Cytoplasmic, Receptors, Antigen, T-Cell, Animals, High-Throughput Nucleotide Sequencing, Humans, RNA, Single-Cell Analysis, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::5f92f5ada6c09f4db484953b93fb4698
https://pubmed.ncbi.nlm.nih.gov/30758830

المؤلفون: Ida Lindeman, Michael J. T. Stubbington

المصدر: Methods in Molecular Biology ISBN: 9781493990566

مصطلحات موضوعية: 0301 basic medicine, Sequence reconstruction, Computer science, T-cell receptor, Inference, RNA-Seq, hemic and immune systems, chemical and pharmacologic phenomena, Computational biology, 03 medical and health sciences, 030104 developmental biology, 0302 clinical medicine, Immunoglobulin class switching, Antigen receptor, 030215 immunology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7c9cbfc32859e1b52e3168eafbee9a8a
http://hdl.handle.net/10852/77527

المؤلفون: Sarah A. Teichmann, Rachel A. Botting, Michael J. T. Stubbington, Krzysztof Polanski, Kerstin B. Meyer, Miquel Vento-Tormo, Lucy Gardner, Gavin J. Wright, Steve Lisgo, Staffan Holmqvist, Barbara A. Innes, Emily Stephenson, Angela Goncalves, Muzlifah Haniffa, Martin A. Ivarsson, David H. Rowitch, Andrew Filby, Andrew M. Sharkey, Angela Zou, Mirjana Efremova, Roser Vento-Tormo, Jong-Eun Park, Rebecca Payne, Judith N. Bulmer, Laura Wood, Margherita Y. Turco, Ashley Moffett, Ben Millar, Johan Henriksson, Anna Wilbrey-Clark

المساهمون: Turco, Margherita [0000-0002-3380-7375], Holmqvist, Staffan [0000-0001-6709-6666], Sharkey, Andrew [0000-0002-5072-7748], Rowitch, David [0000-0002-0079-0060], Moffett, Ashley [0000-0002-8388-9073], Teichmann, Sarah [0000-0002-6294-6366], Apollo - University of Cambridge Repository

المصدر: Nature

مصطلحات موضوعية: 0301 basic medicine, Stromal cell, Cellular differentiation, Placenta, Cell Communication, Ligands, Histocompatibility, Maternal-Fetal, Article, 03 medical and health sciences, Immune system, Fetus, Pregnancy, RNA, Small Cytoplasmic, medicine, Decidua, Humans, Decidual cells, reproductive and urinary physiology, Multidisciplinary, Sequence Analysis, RNA, Trophoblast, Placentation, Cell Differentiation, Cell biology, Trophoblasts, Killer Cells, Natural, 030104 developmental biology, medicine.anatomical_structure, embryonic structures, Female, Single-Cell Analysis, Stromal Cells, Transcriptome

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::42a0bc9de404bffda1f86ff0092ec7bb
https://europepmc.org/articles/PMC7612850/