المؤلفون: Sayaka Miura, Tenzin Dolker, Maxwell Sanderford, Sudhir Kumar

المصدر: Computational and Structural Biotechnology Journal, Vol 21, Iss , Pp 3894-3903 (2023)

مصطلحات موضوعية: Single-cell sequencing, Phylogeny, Mutational history, Tumor evolution, Metastasis, Biotechnology, TP248.13-248.65

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2001037023002635; https://doaj.org/toc/2001-0370

URL الوصول: https://doaj.org/article/91be2d16836a49b09b6fde58ee9023ee

المؤلفون: Nicholas J Ose, Brandon M Butler, Avishek Kumar, I Can Kazan, Maxwell Sanderford, Sudhir Kumar, S Banu Ozkan

المصدر: PLoS Computational Biology, Vol 18, Iss 4, p e1010006 (2022)

مصطلحات موضوعية: Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

URL الوصول: https://doaj.org/article/6e2ba546c14d47ba9f054f2d9606ca48

المؤلفون: Xuming Zhou, Qianhui Dou, Guangyi Fan, Quanwei Zhang, Maxwell Sanderford, Alaattin Kaya, Jeremy Johnson, Elinor K. Karlsson, Xiao Tian, Aleksei Mikhalchenko, Sudhir Kumar, Andrei Seluanov, Zhengdong D. Zhang, Vera Gorbunova, Xin Liu, Vadim N. Gladyshev

المصدر: Cell Reports, Vol 32, Iss 4, Pp 107949- (2020)

مصطلحات موضوعية: beaver, naked mole rat, genome, stress resistance, longevity, aging, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S221112472030930X; https://doaj.org/toc/2211-1247

URL الوصول: https://doaj.org/article/ea51d19aa12e402fac6d66e05cd4f525

المؤلفون: Sudhir Kumar, Charlotte Konikoff, Maxwell Sanderford, Li Liu, Stuart Newfeld, Jieping Ye, Rob J. Kulathinal

المصدر: G3: Genes, Genomes, Genetics, Vol 7, Iss 8, Pp 2791-2797 (2017)

مصطلحات موضوعية: dotplot, embryonic expression patterns, gene regulation, image analysis, intergenic regions, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2160-1836

URL الوصول: https://doaj.org/article/a633dccf2dcb42c1876ec355045254fd

المؤلفون: Antonia Chroni, Sayaka Miura, Lauren Hamilton, Tracy Vu, Stephen G. Gaffney, Vivian Aly, Sajjad Karim, Maxwell Sanderford, Jeffrey P. Townsend, Sudhir Kumar

المصدر: Cancers; Volume 14; Issue 17; Pages: 4326

مصطلحات موضوعية: tumor evolution, metastasis, molecular evolution, phylogenetics, phylodynamics, cancer

وصف الملف: application/pdf

Relation: https://dx.doi.org/10.3390/cancers14174326

الاتاحة: https://doi.org/10.3390/cancers14174326

المؤلفون: Sudhir Kumar, Michael Suleski, Jack M Craig, Adrienne E Kasprowicz, Maxwell Sanderford, Michael Li, Glen Stecher, S Blair Hedges

المصدر: Molecular biology and evolution.

مصطلحات موضوعية: Genetics, Molecular Biology, Ecology, Evolution, Behavior and Systematics

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0a9fb4025270483894b04aa2a55a6bdc
https://pubmed.ncbi.nlm.nih.gov/35932227

المؤلفون: Antonia Chroni, Vivian Aly, Maxwell Sanderford, Sayaka Miura, Tracy Vu, Olumide Oladeinde, Sudhir Kumar, Koichiro Tamura

المصدر: Bioinformatics

مصطلحات موضوعية: Statistics and Probability, Clone (cell biology), Computational biology, Biology, Bayesian inference, Biochemistry, Metastasis, 03 medical and health sciences, 0302 clinical medicine, Phylogenetics, Neoplasms, medicine, Humans, Genomes, Molecular Biology, Phylogeny, 030304 developmental biology, 0303 health sciences, Phylogenetic tree, Cancer, Bayes Theorem, medicine.disease, Primary tumor, Clone Cells, Computer Science Applications, Computational Mathematics, Pathfinder, Computational Theory and Mathematics, 030220 oncology & carcinogenesis, Mutation

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8231828fe4e3b028bbac4d42932fdafe
https://doi.org/10.1093/bioinformatics/btaa795

المؤلفون: Pramod Chandrashekar, Biao Zeng, Sudhir Kumar, Li Liu, Maxwell Sanderford, Greg Gibson

المصدر: Bioinformatics

مصطلحات موضوعية: Statistics and Probability, Linkage disequilibrium, AcademicSubjects/SCI01060, Colon, Quantitative Trait Loci, Gene Expression, Locus (genetics), Genome-wide association study, Computational biology, Biology, Biochemistry, Hippocampus, Polymorphism, Single Nucleotide, Linkage Disequilibrium, 03 medical and health sciences, 0302 clinical medicine, Genetic linkage, Humans, Molecular Biology, Gene, 030304 developmental biology, Regulation of gene expression, 0303 health sciences, Genetics and Population Analysis, Genetic variants, Chromosome Mapping, Original Papers, Computer Science Applications, Computational Mathematics, R package, Computational Theory and Mathematics, Expression quantitative trait loci, 030217 neurology & neurosurgery, Genome-Wide Association Study

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ed365776a249fba8278f6be258d45562
http://europepmc.org/articles/PMC8150140

المؤلفون: Marcos A Caraballo-Ortiz, Sayaka Miura, Maxwell Sanderford, Tenzin Dolker, Qiqing Tao, Steven Weaver, Sergei L K Pond, Sudhir Kumar

المصدر: bioRxiv
article-version (status) pre
article-version (number) 1

مصطلحات موضوعية: Statistics and Probability, SARS-CoV-2, COVID-19, Genome, Viral, Biochemistry, Article, Computer Science Applications, Computational Mathematics, Haplotypes, Computational Theory and Mathematics, Mutation, Humans, Molecular Biology, Phylogeny

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5f6d1a31551ce7497ce36e96135f569d
https://doi.org/10.1101/2021.12.13.472454

المؤلفون: Marcos A. Caraballo-Ortiz, Qiqing Tao, Steven Weaver, Sergei L Kosakovsky Pond, Sudhir Kumar, Maxwell Sanderford, Sayaka Miura, Sudip Sharma

المصدر: Molecular Biology and Evolution
bioRxiv
article-version (status) pre
article-version (number) 1

مصطلحات موضوعية: Most recent common ancestor, Lineage (genetic), Coronavirus disease 2019 (COVID-19), Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), Genome, Viral, Disease, Biology, AcademicSubjects/SCI01180, medicine.disease_cause, Genome, Article, Evolution, Molecular, 03 medical and health sciences, 0302 clinical medicine, Phylogenetics, Pandemic, Genetics, medicine, Humans, Molecular Biology, Index case, Pandemics, Ecology, Evolution, Behavior and Systematics, Phylogeny, 030304 developmental biology, Progenitor, Coronavirus, 0303 health sciences, SARS-CoV-2, AcademicSubjects/SCI01130, COVID-19, Computational Biology, Sequence Analysis, DNA, Biological Evolution, Evolutionary biology, Mutation, Contact Tracing, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4c6bb89a6d53e7b42026402740e7dd41
https://doi.org/10.1101/2020.09.24.311845

المؤلفون: Guangyi Fan, Zhengdong Zhang, Jeremy Johnson, Aleksei E. Mikhalchenko, Vera Gorbunova, Andrei Seluanov, Sudhir Kumar, Vadim N. Gladyshev, Xuming Zhou, Quanwei Zhang, Xiao Tian, Alaattin Kaya, Maxwell Sanderford, Elinor K. Karlsson, Xin Liu, Qianhui Dou

المصدر: Cell Reports, Vol 32, Iss 4, Pp 107949-(2020)
Cell Rep

مصطلحات موضوعية: 0301 basic medicine, Rodent, DNA damage, media_common.quotation_subject, Rodentia, Genome, General Biochemistry, Genetics and Molecular Biology, Article, Chromosome conformation capture, 03 medical and health sciences, 0302 clinical medicine, Species Specificity, longevity, biology.animal, Animals, genome, lcsh:QH301-705.5, Naked mole-rat, media_common, stress resistance, beaver, biology, Mole Rats, aging, Longevity, naked mole rat, biology.organism_classification, Phenotype, 030104 developmental biology, Substitution model, lcsh:Biology (General), Evolutionary biology, Models, Animal, Transcriptome, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1809800765bc54b22feb59779278f625
http://www.sciencedirect.com/science/article/pii/S221112472030930X

المؤلفون: Sonja J. Pyott, Katrina M. Schrode, Sudhir Kumar, Catherine M. Barone, Laurel A. Screven, Jun Ping Bai, Thomas J. Park, Steven D. Price, Joseph Santos-Sacchi, Amanda M. Lauer, Anna Lysakowski, Maxwell Sanderford, Marcel van Tuinen

المساهمون: Perceptual and Cognitive Neuroscience (PCN)

المصدر: Curr Biol
Current Biology, 30(22), 4329-4341.e4. CELL PRESS

مصطلحات موضوعية: 0301 basic medicine, Cochlear amplifier, Hearing loss, Stereocilia (inner ear), cochlea, selection, Biology, Deafness, General Biochemistry, Genetics and Molecular Biology, Article, Evolution, Molecular, 03 medical and health sciences, 0302 clinical medicine, Hearing, evolution, Hair Cells, Auditory, medicine, otorhinolaryngologic diseases, Animals, prestin, Selection, Genetic, Prestin, Gene, Cochlea, stereocilia, auditory outer hair cells, Mole Rats, adaptive, hair bundle, Eusociality, Adaptation, Physiological, cochlear amplifier, 030104 developmental biology, Amino Acid Substitution, Evolutionary biology, Africa, biology.protein, Microscopy, Electron, Scanning, medicine.symptom, General Agricultural and Biological Sciences, 030217 neurology & neurosurgery, Function (biology)

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c6d8b65ac3b2349e2a4ee4a5ab05ac2b
https://pubmed.ncbi.nlm.nih.gov/32888484

المؤلفون: Joel T. Dudley, Alexander Platt, Laura B. Scheinfeldt, Koichiro Tamura, Ravi Patel, Sudhir Kumar, Ke Xu, Tamera R Lanham, Maxwell Sanderford, Benjamin S. Glicksberg

المصدر: Molecular Biology and Evolution

مصطلحات موضوعية: 0301 basic medicine, missense, Mutation rate, Lineage (genetic), Population, Adaptation, Biological, Gene Conversion, adaptation, Biology, 03 medical and health sciences, 0302 clinical medicine, evolution, Genetics, Human proteome project, Humans, Exome, Allele, education, Molecular Biology, Allele frequency, Phylogeny, Discoveries, Ecology, Evolution, Behavior and Systematics, education.field_of_study, Polymorphism, Genetic, Genome, Human, Biological Evolution, 030104 developmental biology, Evolutionary biology, Human genome, Adaptation, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d49b819c47b495f1b736ba13140c7e7d
https://doi.org/10.1093/molbev/msy107

المؤلفون: Stuart J. Newfeld, Maxwell Sanderford, Li Liu, Charlotte E. Konikoff, Jieping Ye, Sudhir Kumar, Rob J. Kulathinal

المصدر: G3: Genes|Genomes|Genetics
G3: Genes, Genomes, Genetics, Vol 7, Iss 8, Pp 2791-2797 (2017)

مصطلحات موضوعية: 0301 basic medicine, dotplot, Genome, Insect, embryonic expression patterns, In situ hybridization, Computational biology, Biology, QH426-470, Investigations, Conserved sequence, 03 medical and health sciences, Data sequences, Imaging, Three-Dimensional, image analysis, Genetics, Animals, Molecular Biology, Drosophila, Gene, Genetics (clinical), Conserved Sequence, In Situ Hybridization, Regulation of gene expression, Binding Sites, biology.organism_classification, intergenic regions, 030104 developmental biology, Drosophila melanogaster, Gene Expression Regulation, gene regulation, Function (biology), Software, Transcription Factors

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::33d941e4ca1d6895cf9b635a62ec31a7
http://europepmc.org/articles/PMC5555482

المؤلفون: Koichiro Tamura, Vanessa E. Gray, Maxwell Sanderford, Li Liu, Sudhir Kumar

المصدر: Molecular Biology and Evolution. 33:245-254

مصطلحات موضوعية: 0301 basic medicine, Population, Adaptation, Biological, Genomics, Biology, Genome, Evolution, Molecular, 03 medical and health sciences, Phylogenetics, Genetic variation, Methods, Genetics, Humans, Disease, education, Molecular Biology, Phylogeny, Ecology, Evolution, Behavior and Systematics, education.field_of_study, Natural selection, Genetic Variation, 030104 developmental biology, Variome, Evolutionary biology, Mutation, Human genome

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b9970eb6fe22c308f1f55dc2b86fa427
https://doi.org/10.1093/molbev/msv198

المؤلفون: Sudhir Kumar, Maxwell Sanderford, Atul J. Butte, Joel T. Dudley, Rong Chen

المصدر: Molecular Biology and Evolution. 29:2087-2094

مصطلحات موضوعية: Genetic Markers, Genetics, Candidate gene, Genotype, Quantitative Trait Loci, Single-nucleotide polymorphism, Genome-wide association study, Tag SNP, Biology, Polymorphism, Single Nucleotide, Evolution, Molecular, ROC Curve, Evolutionary biology, Genetic marker, Genetic variation, Animals, Humans, Genetic Predisposition to Disease, Letters, Genetic variability, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Genome-Wide Association Study, Genetic association

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7c067ce942778c992fbd147c601ef6c1
https://doi.org/10.1093/molbev/mss079

المؤلفون: Koichiro Tamura, Maxwell Sanderford, Glen Stecher, Sudhir Kumar, Li Liu, Daniel Peterson

المصدر: Bioinformatics (Oxford, England). 30(9)

مصطلحات موضوعية: Statistics and Probability, Context (language use), Computational biology, Variation (game tree), Multiple methods, Biology, computer.software_genre, Mega, Biochemistry, Evolution, Molecular, Analysis software, Animals, Humans, Exome, Amino Acids, Molecular Biology, Genetics, Human evolutionary genetics, High-Throughput Nucleotide Sequencing, Applications Notes, Computer Science Applications, Computational Mathematics, Computational Theory and Mathematics, Mutation, Web service, computer, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0dfdce60a4e45fd7f5d319fcc5778123
https://pubmed.ncbi.nlm.nih.gov/24413669

المؤلفون: Jieping Ye, Maxwell Sanderford, Sudhir Kumar, Vanessa E. Gray, Li Liu

مصطلحات موضوعية: Genetics, Genetic Variation, High-Throughput Nucleotide Sequencing, HapMap Project, Cell Biology, Biology, Disease gene identification, Polymorphism, Single Nucleotide, Biochemistry, Article, Nucleotide diversity, Evolution, Molecular, Gene Frequency, Genetic variation, Humans, Exome, International HapMap Project, Molecular Biology, Allele frequency, Exome sequencing, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5baf6448a0dbc706297f50a062c74aed
https://europepmc.org/articles/PMC3810944/