المؤلفون: Yingwei Hu, Jianbo Pan, Punit Shah, Minghui Ao, Stefani N. Thomas, Yang Liu, Lijun Chen, Michael Schnaubelt, David J. Clark, Henry Rodriguez, Emily S. Boja, Tara Hiltke, Christopher R. Kinsinger, Karin D. Rodland, Qing Kay Li, Jiang Qian, Zhen Zhang, Daniel W. Chan, Hui Zhang, Akhilesh Pandey, Amanda Paulovich, Andrew Hoofnagle, Bing Zhang, D.R. Mani, Daniel C. Liebler, David F. Ransohoff, David Fenyo, David L. Tabb, Douglas A. Levine, Eric Kuhn, Forest M. White, Gordon A. Whiteley, Heng Zhu, Ie-Ming Shih, Jasmin Bavarva, Jason E. McDermott, Jeffrey Whiteaker, Karen A. Ketchum, Karl R. Clauser, Kelly Ruggles, Kimberly Elburn, Li Ding, Linda Hannick, Lisa J. Zimmerman, Mark Watson, Mathangi Thiagarajan, Matthew J.C. Ellis, Mauricio Oberti, Mehdi Mesri, Melinda E. Sanders, Melissa Borucki, Michael A. Gillette, Michael Snyder, Nathan J. Edwards, Negin Vatanian, Paul A. Rudnick, Peter B. McGarvey, Philip Mertins, R. Reid Townsend, Ratna R. Thangudu, Richard D. Smith, Robert C. Rivers, Robert J.C. Slebos, Samuel H. Payne, Sherri R. Davies, Shuang Cai, Stephen E. Stein, Steven A. Carr, Steven J. Skates, Subha Madhavan, Tao Liu, Xian Chen, Yingming Zhao, Yue Wang, Zhiao Shi

المصدر: Cell Reports, Vol 33, Iss 3, Pp 108276- (2020)

مصطلحات موضوعية: CPTAC, glycosylation, mass spectrometry, glycoproteomics, tumor clusters, high-grade serous ovarian carcinoma, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2211124720312651; https://doaj.org/toc/2211-1247

URL الوصول: https://doaj.org/article/687878b78b8f4a70bfe6276db55dbef8

المؤلفون: Iosif I. Vaisman, Mauricio Oberti

المصدر: Proteins: Structure, Function, and Bioinformatics. 88:1472-1481

مصطلحات موضوعية: Multifactor Dimensionality Reduction, Computer science, Datasets as Topic, Biochemistry, Convolutional neural network, Machine Learning, 03 medical and health sciences, Sequence Analysis, Protein, Structural Biology, Data Mining, Humans, Amino Acid Sequence, CASP, Molecular Biology, 030304 developmental biology, 0303 health sciences, Sequence, business.industry, 030302 biochemistry & molecular biology, Computational Biology, Pattern recognition, Intrinsically Disordered Proteins, Benchmarking, ROC Curve, Dimensional reduction, Area Under Curve, Key (cryptography), Neural Networks, Computer, Artificial intelligence, Alphabet, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7b313cd1d6f59a7b83fac9f579c57e80
https://doi.org/10.1002/prot.25966

المؤلفون: Yang Liu, Mauricio Oberti, Samuel H. Payne, Zhiao Shi, Minghui Ao, Mathangi Thiagarajan, D. R. Mani, Karen A. Ketchum, Jeffrey R. Whiteaker, Henry Rodriguez, Peter B. McGarvey, Xian Chen, Karl R. Clauser, Nathan Edwards, Amanda G. Paulovich, Shuang Cai, David L. Tabb, Heng Zhu, David F. Ransohoff, Mark A. Watson, Andrew N. Hoofnagle, Kelly V. Ruggles, Jiang Qian, Karin D. Rodland, Qing Kay Li, Daniel C. Liebler, Yingwei Hu, Hui Zhang, Christopher R. Kinsinger, Akhilesh Pandey, Tara Hiltke, Stephen E. Stein, Lijun Chen, Eric Kuhn, Richard D. Smith, Matthew J. Ellis, Subha Madhavan, Linda Hannick, Punit Shah, Kimberly Elburn, Yingming Zhao, Bing Zhang, Robert J.C. Slebos, Daniel W. Chan, Zhen Zhang, Jasmin H. Bavarva, Sherri R. Davies, David J. Clark, Li Ding, Mehdi Mesri, Jianbo Pan, Melinda E. Sanders, Douglas A. Levine, Forest M. White, Lisa J. Zimmerman, Steven A. Carr, Michael A. Gillette, Tao Liu, Yue Wang, Robert Rivers, Melissa Borucki, David Fenyö, Steven J. Skates, Ie Ming Shih, Gordon Whiteley, Michael Snyder, Raymond R. Townsend, Philip Mertins, Ratna R. Thangudu, Paul A. Rudnick, Michael Schnaubelt, Negin Vatanian, Jason E. McDermott, Stefani N. Thomas, Emily S. Boja

المصدر: Cell Reports, Vol 33, Iss 3, Pp 108276-(2020)
Cell Rep

مصطلحات موضوعية: Proteomics, 0301 basic medicine, animal structures, Glycosylation, CPTAC, glycosylation, macromolecular substances, Tissue Banks, Computational biology, Biology, Article, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, Ovarian carcinoma, Biomarkers, Tumor, Humans, glycoproteomics, Gene, lcsh:QH301-705.5, Glycoproteins, mass spectrometry, Ovarian Neoplasms, chemistry.chemical_classification, Cystadenocarcinoma, Serous, Glycoproteomics, carbohydrates (lipids), Serous fluid, 030104 developmental biology, chemistry, lcsh:Biology (General), Phosphorylation, Female, lipids (amino acids, peptides, and proteins), tumor clusters, Technology Platforms, Glycoprotein, high-grade serous ovarian carcinoma, 030217 neurology & neurosurgery

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c080055c16c51f1be6e8ce42b182c2df
http://www.sciencedirect.com/science/article/pii/S2211124720312651

المؤلفون: Mehdi Mesri, Akhilesh Pandey, Lauren C. Tang, Shayan C. Avanessian, Stefani N. Thomas, Emily S. Boja, Chen Huang, Lili Blumenberg, Mauricio Oberti, Peter B. McGarvey, Karen A. Ketchum, Zhen Zhang, Amanda G. Paulovich, Samuel H. Payne, Ratna R. Thangudu, Karsten Krug, Gad Getz, Shuang Cai, David I. Heiman, Karl R. Clauser, David F. Ransohoff, Nathan Edwards, Ie Ming Shih, Chet Birger, Gordon Whiteley, Michael Snyder, Tara Hiltke, Paul A. Rudnick, Christopher R. Kinsinger, Philipp Mertins, Subha Madhavan, Henry Rodriguez, Melinda E. Sanders, Jingqin Luo, Xian Chen, Yosef E. Maruvka, Kenna M. Shaw, George Miles, Shunqiang Li, Eric Kuhn, Lisa J. Zimmerman, Zhiao Shi, Christopher G. Maher, Stephen E. Stein, Thomas F. Westbrook, Matthew A. Wyczalkowski, Daniel W. Chan, Bo Wen, Xi Steven Chen, Song Cao, Hui Zhang, Yifat Geffen, Jason E. McDermott, Yuxing Liao, Yue Wang, Yingming Zhao, David L. Tabb, Mathangi Thiagarajan, D. R. Mani, Matthew J. Ellis, Forest M. White, Robert Rivers, Heng Zhu, Yongchao Dou, David Fenyö, Antonio Colaprico, Shankha Satpathy, Eric J. Jaehnig, Jeffrey R. Whiteaker, Li Ding, Meenakshi Anurag, Karin D. Rodland, Andrew N. Hoofnagle, Ana I. Robles, Kelly V. Ruggles, Steven A. Carr, Richard D. Smith, Jacob J. Kennedy, Tao Liu, Robbert J.C. Slebos, Maciej Wiznerowicz, Daniel C. Liebler, M. Harry Kane, Jonathan T. Lei, Alla Karpova, Ramani B. Kothadia, Douglas A. Levine, Bing Zhang, Michael A. Gillette, Jarey Wang

المصدر: Cell
Elsevier

مصطلحات موضوعية: Adult, DNA Repair, Carcinogenesis, Receptor, ErbB-2, medicine.medical_treatment, Breast Neoplasms, Biology, Proteomics, medicine.disease_cause, Retinoblastoma Protein, General Biochemistry, Genetics and Molecular Biology, Article, Targeted therapy, Cohort Studies, 03 medical and health sciences, 0302 clinical medicine, Breast cancer, medicine, Tumor Microenvironment, Humans, Metabolomics, APOBEC Deaminases, Molecular Targeted Therapy, Phosphorylation, Protein Kinase Inhibitors, 030304 developmental biology, Aged, Proteogenomics, Aged, 80 and over, 0303 health sciences, Phosphoproteomics, Amplicon, Middle Aged, medicine.disease, Immune checkpoint, Mutagenesis, Cancer research, Female, Immunotherapy, Technology Platforms, Protein Kinases, 030217 neurology & neurosurgery, DNA Damage

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f59aa97d338438527c048cae9e15d045
http://europepmc.org/articles/PMC8077737

المؤلفون: Shuang Cai, Subha Madhavan, Ratna R. Thangudu, Karen A. Ketchum, Mauricio Oberti, Nathan Edwards, Shine Jacob, Peter B. McGarvey

المصدر: Journal of Proteome Research. 14:2707-2713

مصطلحات موضوعية: Proteomics, Biomedical Research, Information Storage and Retrieval, Cancer, Genomics, General Chemistry, Computational biology, Biology, Bioinformatics, medicine.disease, Biochemistry, Tumor Sample, Neoplasm Proteins, Transcriptome, Data portal, Neoplasms, Proteome, medicine, Humans, Protein abundance, Databases, Protein

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5d0ffa6f215a37f0f03ef890e06782bb
https://doi.org/10.1021/pr501254j

المؤلفون: Mauricio Oberti, Iosif I. Vaisman

المصدر: BCB

مصطلحات موضوعية: 0301 basic medicine, Sequence, Drug discovery, business.industry, Decision tree, Computational biology, Biology, Machine learning, computer.software_genre, Intrinsically disordered proteins, 03 medical and health sciences, Identification (information), 030104 developmental biology, Artificial intelligence, business, computer

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::716ba33df857b5145f5e9eee2e64c2a9
https://doi.org/10.1145/3107411.3107480

المؤلفون: Emily S. Boja, Ratna R. Thangudu, Karl R. Clauser, Li Ding, Steven J. Skates, David L. Tabb, Tao Liu, Christopher R. Kinsinger, Yue Wang, Vladislav A. Petyuk, Andrew N. Hoofnagle, Matthew C. Chambers, Ie Ming Shih, Kelly V. Ruggles, Gordon Whiteley, Michael Snyder, Matthew J. Ellis, Stephen E. Stein, Mauricio Oberti, Karen A. Ketchum, Melissa Borucki, Samuel H. Payne, Eric Kuhn, Sara R. Savage, Zhiao Shi, Zhen Zhang, Yongchao Dou, David Fenyö, Bing Zhang, Melinda E. Sanders, Matthew E. Monroe, Shuang Cai, Philip Mertins, Peter B. McGarvey, Mathangi Thiagarajan, R. Reid Townsend, Daniel W. Chan, Robert Rivers, Nathan Edwards, Hui Zhang, Tara Hiltke, Bo Wen, Jasmin H. Bavarva, Steven A. Carr, Richard D. Smith, Mark A. Watson, Xiaojing Wang, Mehdi Mesri, Yi-Ting Wang, Douglas A. Levine, Linda Hannick, Rui Zhao, Suhas Vasaikar, Marina A. Gritsenko, Lisa J. Zimmerman, Forest M. White, Amanda G. Paulovich, Michael A. Gillette, Xian Chen, Henry Rodriguez, Ken S. Lau, Akhilesh Pandey, Robbert J.C. Slebos, Daniel C. Liebler, Jeffrey R. Whiteaker, Therese R. W. Clauss, Karin D. Rodland, Paul A. Rudnick, Subha Madhavan, Kimberly Elburn, Yun Zhang, Negin Vatanian, Osama A. Arshad, Sherri R. Davies, Jason E. McDermott, Qianxing Mo, Ronald J. Moore, David F. Ransohoff, D. R. Mani, Heng Zhu, Yingming Zhao, Chen Huang

المصدر: Cell. 177:1035-1049.e19

مصطلحات موضوعية: Proteomics, Colorectal cancer, Apoptosis, CD8-Positive T-Lymphocytes, Biology, Retinoblastoma Protein, General Biochemistry, Genetics and Molecular Biology, law.invention, 03 medical and health sciences, 0302 clinical medicine, Immune system, Antigen, law, Biomarkers, Tumor, medicine, Humans, Prospective Studies, Phosphorylation, Cell Proliferation, Proteogenomics, 030304 developmental biology, 0303 health sciences, Phosphoproteomics, Genomics, medicine.disease, Tumor antigen, Colonic Neoplasms, Mutation, Cancer research, Suppressor, Microsatellite Instability, Glycolysis, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3f3c2d36061fe998f453e144227651fe
https://doi.org/10.1016/j.cell.2019.03.030

المؤلفون: Subha Madhavan, Peter B. McGarvey, David M. Tanenbaum, Erin K Hedlund, Mauricio Oberti, Baris E. Suzek, Sweta A. Ladwa, Anca D. Dragomir

المصدر: Journal of the American Medical Informatics Association. 19:e125-e128

مصطلحات موضوعية: Quality Control, Data consistency, Databases, Factual, Database, Computer science, media_common.quotation_subject, Breast Neoplasms, Health Informatics, Harmonization, Research and Applications, computer.software_genre, Data science, United States, Data governance, Consistency (database systems), Validation rule, Research Design, Informatics, Data quality, Colonic Neoplasms, Humans, Quality (business), Registries, computer, media_common

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9b20dac3878a410f27b1558fa8cf2164
https://doi.org/10.1136/amiajnl-2011-000546

المؤلفون: Iosif I. Vaisman, Mauricio Oberti

المصدر: F1000Research. 8:230

مصطلحات موضوعية: 0301 basic medicine, Sequence, General Immunology and Microbiology, business.industry, Computer science, A protein, Pattern recognition, General Medicine, Intrinsically disordered proteins, Convolutional neural network, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, 030104 developmental biology, 0302 clinical medicine, Data sequences, Artificial intelligence, General Pharmacology, Toxicology and Pharmaceutics, business, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::3d3c62a0556eb73c780ac37fbc462650
https://doi.org/10.12688/f1000research.17669.1

المؤلفون: Mauricio Oberti

وصف الملف: application/pdf

Relation: http://hdl.handle.net/1920/12260

الاتاحة: http://hdl.handle.net/1920/12260