المؤلفون: Sam Turner, Arghavan Alisoltani, Debbie Bratt, Liel Cohen-Lavi, Bethany L. Dearlove, Christian Drosten, Will M. Fischer, Ron A.M. Fouchier, Ana Silvia Gonzalez-Reiche, Lukasz Jaroszewski, Zain Khalil, Eric LeGresley, Marc Johnson, Terry C. Jones, Barbara Mühlemann, David O’Connor, Mayya Sedova, Maulik Shukla, James Theiler, Zachary S. Wallace, Hyejin Yoon, Yun Zhang, Harm van Bakel, Marciela M. Degrace, Elodie Ghedin, Adam Godzik, Tomer Hertz, Bette Korber, Jacob Lemieux, Anna M. Niewiadomska, Diane J. Post, Morgane Rolland, Richard Scheuermann, Derek J. Smith

المصدر: Emerging Infectious Diseases, Vol 29, Iss 5, Pp 1-9 (2023)

مصطلحات موضوعية: COVID-19, 2019 novel coronavirus disease, coronavirus disease, severe acute respiratory syndrome coronavirus 2, SARS-CoV-2, viruses, Medicine, Infectious and parasitic diseases, RC109-216

وصف الملف: electronic resource

Relation: https://wwwnc.cdc.gov/eid/article/29/5/22-1646_article; https://doaj.org/toc/1080-6040; https://doaj.org/toc/1080-6059

URL الوصول: https://doaj.org/article/9c8ff4d1df5c4feb8b350093d5bc9d12

المؤلفون: Alexander Partin, Thomas Brettin, Yitan Zhu, James M. Dolezal, Sara Kochanny, Alexander T. Pearson, Maulik Shukla, Yvonne A. Evrard, James H. Doroshow, Rick L. Stevens

المصدر: Frontiers in Medicine, Vol 10 (2023)

مصطلحات موضوعية: drug response prediction, histology whole-slide images, gene expression, multimodal deep learning, preclinical drug studies, data augmentation, Medicine (General), R5-920

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmed.2023.1058919/full; https://doaj.org/toc/2296-858X

URL الوصول: https://doaj.org/article/e0d0f63467c2490f8c2c2db626e08d8c

المؤلفون: Sara Jones, Matthew Beyers, Maulik Shukla, Fangfang Xia, Thomas Brettin, Rick Stevens, M Ryan Weil, Satishkumar Ranganathan Ganakammal

المصدر: Cancer Informatics, Vol 21 (2022)

مصطلحات موضوعية: Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1176-9351

URL الوصول: https://doaj.org/article/4936251ad7744b8bb020f50e7aa44780

المؤلفون: Zachary S. Wallace, James Davis, Anna Maria Niewiadomska, Robert D. Olson, Maulik Shukla, Rick Stevens, Yun Zhang, Christian M. Zmasek, Richard H. Scheuermann

المصدر: Frontiers in Bioinformatics, Vol 2 (2022)

مصطلحات موضوعية: SARS-CoV-2, variants of concern, omicron, delta, viral evolution, genomic surveillance, Computer applications to medicine. Medical informatics, R858-859.7

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fbinf.2022.1020189/full; https://doaj.org/toc/2673-7647

URL الوصول: https://doaj.org/article/fbea6d946a9a470e922b5d9464c8e896

المؤلفون: Alexander Partin, Thomas Brettin, Yvonne A. Evrard, Yitan Zhu, Hyunseung Yoo, Fangfang Xia, Songhao Jiang, Austin Clyde, Maulik Shukla, Michael Fonstein, James H. Doroshow, Rick L. Stevens

المصدر: BMC Bioinformatics, Vol 22, Iss 1, Pp 1-18 (2021)

مصطلحات موضوعية: Learning curve, Power law, Drug response prediction, Cell line, Deep learning, Machine learning, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1471-2105

URL الوصول: https://doaj.org/article/873f9cf3b7d54242949d665daefd7144

المؤلفون: Yitan Zhu, Thomas Brettin, Fangfang Xia, Alexander Partin, Maulik Shukla, Hyunseung Yoo, Yvonne A. Evrard, James H. Doroshow, Rick L. Stevens

المصدر: Scientific Reports, Vol 11, Iss 1, Pp 1-11 (2021)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2045-2322

URL الوصول: https://doaj.org/article/37c2f916e6fa45c08315225e5a9e05de

المؤلفون: James J. Davis, S. Wesley Long, Paul A. Christensen, Randall J. Olsen, Robert Olson, Maulik Shukla, Sishir Subedi, Rick Stevens, James M. Musser

المصدر: Microbiology Spectrum, Vol 9, Iss 3 (2021)

مصطلحات موضوعية: ARTIC, COVID-19, SARS-CoV-2, genome sequencing, primers, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2165-0497

URL الوصول: https://doaj.org/article/062a4ecd00f54e97a106680b2bac9081

المؤلفون: S. Wesley Long, Randall J. Olsen, Paul A. Christensen, David W. Bernard, James J. Davis, Maulik Shukla, Marcus Nguyen, Matthew Ojeda Saavedra, Prasanti Yerramilli, Layne Pruitt, Sishir Subedi, Hung-Che Kuo, Heather Hendrickson, Ghazaleh Eskandari, Hoang A. T. Nguyen, J. Hunter Long, Muthiah Kumaraswami, Jule Goike, Daniel Boutz, Jimmy Gollihar, Jason S. McLellan, Chia-Wei Chou, Kamyab Javanmardi, Ilya J. Finkelstein, James M. Musser

المصدر: mBio, Vol 11, Iss 6 (2020)

مصطلحات موضوعية: SARS-CoV-2, COVID-19 disease, genome sequencing, molecular population genomics, evolution, COVID-19, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2150-7511

URL الوصول: https://doaj.org/article/9f1850b41a7e45ea80ff416602d5d71c

المؤلفون: Marcus Nguyen, Robert Olson, Maulik Shukla, Margo VanOeffelen, James J Davis

المصدر: PLoS Computational Biology, Vol 16, Iss 10, p e1008319 (2020)

مصطلحات موضوعية: Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

URL الوصول: https://doaj.org/article/3610374adfd04e9da7b84b2b08c62d3d

المؤلفون: Fangfang Xia, Maulik Shukla, Thomas Brettin, Cristina Garcia-Cardona, Judith Cohn, Jonathan E. Allen, Sergei Maslov, Susan L. Holbeck, James H. Doroshow, Yvonne A. Evrard, Eric A. Stahlberg, Rick L. Stevens

المصدر: BMC Bioinformatics, Vol 19, Iss S18, Pp 71-79 (2018)

مصطلحات موضوعية: Machine learning, Deep learning, Combination therapy, in silico drug screening, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: http://link.springer.com/article/10.1186/s12859-018-2509-3; https://doaj.org/toc/1471-2105

URL الوصول: https://doaj.org/article/fd72bada8c0f46febf9520c3cdac029a

المؤلفون: Yitan Zhu, Thomas Brettin, Fangfang Xia, Alexander Partin, Maulik Shukla, Hyunseung Yoo, Yvonne A. Evrard, James H. Doroshow, Rick L. Stevens

المصدر: Scientific Reports, Vol 11, Iss 1, Pp 1-1 (2021)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2045-2322

URL الوصول: https://doaj.org/article/73c4d02e5c51427789680731bb6ebbcf

المؤلفون: Alice R. Wattam, Thomas J. Inzana, Kelly P. Williams, Shrinivasrao P. Mane, Maulik Shukla, Nalvo F. Almeida, Allan W. Dickerman, Steven Mason, Ignacio Moriyón, David O'Callaghan, Adrian M. Whatmore, Bruno W. Sobral, Rebekah V. Tiller, Alex R. Hoffmaster, Michael A. Frace, Cristina De Castro, Antonio Molinaro, Stephen M. Boyle, Barun K. De, João C. Setubal

المصدر: mBio, Vol 3, Iss 6 (2012)

مصطلحات موضوعية: Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2150-7511

URL الوصول: https://doaj.org/article/420efde6f3084807bf94b8c4b57829c5

المؤلفون: Joseph J Gillespie, Kelly Williams, Maulik Shukla, Eric E Snyder, Eric K Nordberg, Shane M Ceraul, Chitti Dharmanolla, Daphne Rainey, Jeetendra Soneja, Joshua M Shallom, Nataraj Dongre Vishnubhat, Rebecca Wattam, Anjan Purkayastha, Michael Czar, Oswald Crasta, Joao C Setubal, Abdu F Azad, Bruno S Sobral

المصدر: PLoS ONE, Vol 3, Iss 4, p e2018 (2008)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC2635572?pdf=render; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/ca2718f17ef5494d84359b74b0b8300d

المؤلفون: Priyanka Vasanthakumari, Yitan Zhu, Thomas Brettin, Alexander Partin, Maulik Shukla, Fangfang Xia, Oleksandr Narykov, Michael Ryan Weil, Rick L. Stevens

المصدر: Cancers, Vol 16, Iss 3, p 530 (2024)

مصطلحات موضوعية: active learning, machine learning, drug response prediction, drug discovery, cancer, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

Relation: https://www.mdpi.com/2072-6694/16/3/530; https://doaj.org/toc/2072-6694; https://doaj.org/article/7b539982dda64029814dc6255a7a6330

الاتاحة: https://doi.org/10.3390/cancers16030530
https://doaj.org/article/7b539982dda64029814dc6255a7a6330

المؤلفون: Oleksandr Narykov, Yitan Zhu, Thomas Brettin, Yvonne A. Evrard, Alexander Partin, Maulik Shukla, Fangfang Xia, Austin Clyde, Priyanka Vasanthakumari, James H. Doroshow, Rick L. Stevens

المصدر: Cancers, Vol 16, Iss 1, p 50 (2023)

مصطلحات موضوعية: anti-cancer drug response prediction, machine learning, deep learning, binding affinity, computational docking, molecular mechanisms of action, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

Relation: https://www.mdpi.com/2072-6694/16/1/50; https://doaj.org/toc/2072-6694; https://doaj.org/article/be82dc33aef14ce49d80ae4a0d112a6f

الاتاحة: https://doi.org/10.3390/cancers16010050
https://doaj.org/article/be82dc33aef14ce49d80ae4a0d112a6f

المؤلفون: Narykov, Oleksandr, Zhu, Yitan, BRETTIN, THOMAS, Partin, Alexander, Maulik, Shukla, Stevens, Rick

Relation: https://doi.org/10.1101/2024.03.14.585074; https://doi.org/10.5281/zenodo.13787608; https://doi.org/10.5281/zenodo.13787609; oai:zenodo.org:13787609

الاتاحة: https://doi.org/10.5281/zenodo.13787609

المؤلفون: Yitan Zhu, Thomas Brettin, Yvonne A. Evrard, Fangfang Xia, Alexander Partin, Maulik Shukla, Hyunseung Yoo, James H. Doroshow, Rick L. Stevens

المصدر: Genes; Volume 11; Issue 9; Pages: 1070

مصطلحات موضوعية: general drug response prediction model, gene selection, co-expression extrapolation (COXEN), precision oncology

جغرافية الموضوع: agris

وصف الملف: application/pdf

Relation: Technologies and Resources for Genetics; https://dx.doi.org/10.3390/genes11091070

الاتاحة: https://doi.org/10.3390/genes11091070

المؤلفون: Maxim Zvyagin, Alexander Brace, Kyle Hippe, Yuntian Deng, Bin Zhang, Cindy Orozco Bohorquez, Austin Clyde, Bharat Kale, Danilo Perez-Rivera, Heng Ma, Carla M. Mann, Michael Irvin, J. Gregory Pauloski, Logan Ward, Valerie Hayot-Sasson, Murali Emani, Sam Foreman, Zhen Xie, Diangen Lin, Maulik Shukla, Weili Nie, Josh Romero, Christian Dallago, Arash Vahdat, Chaowei Xiao, Thomas Gibbs, Ian Foster, James J. Davis, Michael E. Papka, Thomas Brettin, Rick Stevens, Anima Anandkumar, Venkatram Vishwanath, Arvind Ramanathan

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eeb3062847bc49934d638fc48a21a278
https://doi.org/10.1101/2022.10.10.511571

المؤلفون: Songhao Jiang, Rick Stevens, Yitan Zhu, James H. Doroshow, Thomas Brettin, Maulik Shukla, Fangfang Xia, Austin Clyde, Alexander Partin, Hyunseung Yoo, Michael Fonstein, Yvonne A. Evrard

المصدر: BMC Bioinformatics, Vol 22, Iss 1, Pp 1-18 (2021)
BMC Bioinformatics

مصطلحات موضوعية: FOS: Computer and information sciences, Computer Science - Machine Learning, Computer science, Generalization, QH301-705.5, Computer applications to medicine. Medical informatics, R858-859.7, Machine learning, computer.software_genre, Quantitative Biology - Quantitative Methods, Biochemistry, Machine Learning (cs.LG), Power law, 03 medical and health sciences, 0302 clinical medicine, Drug response prediction, Structural Biology, Neoplasms, Sensitivity (control systems), Prospective Studies, Biology (General), Molecular Biology, Learning curve, Quantitative Methods (q-bio.QM), 030304 developmental biology, Hyperparameter, 0303 health sciences, Artificial neural network, business.industry, Applied Mathematics, Deep learning, Computer Science Applications, Pharmaceutical Preparations, Sample size determination, 030220 oncology & carcinogenesis, FOS: Biological sciences, Metric (mathematics), Artificial intelligence, business, Cell line, computer, Research Article

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fbcc6eeca7ea8d0b5c74c9462c23c5c4
https://doaj.org/article/873f9cf3b7d54242949d665daefd7144

المؤلفون: Marciela M. DeGrace, Elodie Ghedin, Matthew B. Frieman, Florian Krammer, Alba Grifoni, Arghavan Alisoltani, Galit Alter, Rama R. Amara, Ralph S. Baric, Dan H. Barouch, Jesse D. Bloom, Louis-Marie Bloyet, Gaston Bonenfant, Adrianus C. M. Boon, Eli A. Boritz, Debbie L. Bratt, Traci L. Bricker, Liliana Brown, William J. Buchser, Juan Manuel Carreño, Liel Cohen-Lavi, Tamarand L. Darling, Meredith E. Davis-Gardner, Bethany L. Dearlove, Han Di, Meike Dittmann, Nicole A. Doria-Rose, Daniel C. Douek, Christian Drosten, Venkata-Viswanadh Edara, Ali Ellebedy, Thomas P. Fabrizio, Guido Ferrari, Will M. Fischer, William C. Florence, Ron A. M. Fouchier, John Franks, Adolfo García-Sastre, Adam Godzik, Ana Silvia Gonzalez-Reiche, Aubree Gordon, Bart L. Haagmans, Peter J. Halfmann, David D. Ho, Michael R. Holbrook, Yaoxing Huang, Sarah L. James, Lukasz Jaroszewski, Trushar Jeevan, Robert M. Johnson, Terry C. Jones, Astha Joshi, Yoshihiro Kawaoka, Lisa Kercher, Marion P. G. Koopmans, Bette Korber, Eilay Koren, Richard A. Koup, Eric B. LeGresley, Jacob E. Lemieux, Mariel J. Liebeskind, Zhuoming Liu, Brandi Livingston, James P. Logue, Yang Luo, Adrian B. McDermott, Margaret J. McElrath, Victoria A. Meliopoulos, Vineet D. Menachery, David C. Montefiori, Barbara Mühlemann, Vincent J. Munster, Jenny E. Munt, Manoj S. Nair, Antonia Netzl, Anna M. Niewiadomska, Sijy O’Dell, Andrew Pekosz, Stanley Perlman, Marjorie C. Pontelli, Barry Rockx, Morgane Rolland, Paul W. Rothlauf, Sinai Sacharen, Richard H. Scheuermann, Stephen D. Schmidt, Michael Schotsaert, Stacey Schultz-Cherry, Robert A. Seder, Mayya Sedova, Alessandro Sette, Reed S. Shabman, Xiaoying Shen, Pei-Yong Shi, Maulik Shukla, Viviana Simon, Spencer Stumpf, Nancy J. Sullivan, Larissa B. Thackray, James Theiler, Paul G. Thomas, Sanja Trifkovic, Sina Türeli, Samuel A. Turner, Maria A. Vakaki, Harm van Bakel, Laura A. VanBlargan, Leah R. Vincent, Zachary S. Wallace, Li Wang, Maple Wang, Pengfei Wang, Wei Wang, Scott C. Weaver, Richard J. Webby, Carol D. Weiss, David E. Wentworth, Stuart M. Weston, Sean P. J. Whelan, Bradley M. Whitener, Samuel H. Wilks, Xuping Xie, Baoling Ying, Hyejin Yoon, Bin Zhou, Tomer Hertz, Derek J. Smith, Michael S. Diamond, Diane J. Post, Mehul S. Suthar

المساهمون: Ghedin, Elodie [0000-0002-1515-725X], Frieman, Matthew B [0000-0003-0107-0775], Krammer, Florian [0000-0003-4121-776X], Grifoni, Alba [0000-0002-2209-5966], Alter, Galit [0000-0002-7680-9215], Amara, Rama R [0000-0002-6309-6797], Baric, Ralph S [0000-0001-6827-8701], Barouch, Dan H [0000-0001-5127-4659], Bloom, Jesse D [0000-0003-1267-3408], Bloyet, Louis-Marie [0000-0002-5648-3190], Boon, Adrianus CM [0000-0002-4700-8224], Bratt, Debbie L [0000-0002-5822-5558], Buchser, William J [0000-0002-6675-6359], Cohen-Lavi, Liel [0000-0001-6909-4779], Dearlove, Bethany L [0000-0003-3653-4592], Drosten, Christian [0000-0001-7923-0519], Edara, Venkata-Viswanadh [0000-0001-9321-7839], Ellebedy, Ali [0000-0002-6129-2532], Fabrizio, Thomas P [0000-0002-8960-0728], Fouchier, Ron AM [0000-0001-8095-2869], García-Sastre, Adolfo [0000-0002-6551-1827], Godzik, Adam [0000-0002-2425-852X], Gonzalez-Reiche, Ana Silvia [0000-0003-3583-4497], Gordon, Aubree [0000-0002-9352-7877], Haagmans, Bart L [0000-0001-6221-2015], Ho, David D [0000-0003-1627-149X], Holbrook, Michael R [0000-0002-0824-2667], Huang, Yaoxing [0000-0001-6270-1644], James, Sarah L [0000-0002-6969-1167], Johnson, Robert M [0000-0002-1976-7688], Jones, Terry C [0000-0003-1120-9531], Joshi, Astha [0000-0003-4914-8228], Kawaoka, Yoshihiro [0000-0001-5061-8296], Kercher, Lisa [0000-0001-6300-0452], Koopmans, Marion PG [0000-0002-5204-2312], Korber, Bette [0000-0002-2026-5757], LeGresley, Eric B [0000-0002-5286-5693], Liebeskind, Mariel J [0000-0003-4595-0651], Liu, Zhuoming [0000-0001-8198-0976], Logue, James P [0000-0002-7410-9741], Luo, Yang [0000-0003-3277-8792], McDermott, Adrian B [0000-0003-0616-9117], Meliopoulos, Victoria A [0000-0003-1442-9177], Menachery, Vineet D [0000-0001-8803-7606], Munster, Vincent J [0000-0002-2288-3196], Nair, Manoj S [0000-0002-5994-3957], Netzl, Antonia [0000-0001-8034-2382], Pekosz, Andrew [0000-0003-3248-1761], Perlman, Stanley [0000-0003-4213-2354], Rockx, Barry [0000-0003-2463-027X], Rolland, Morgane [0000-0003-3650-8490], Rothlauf, Paul W [0000-0002-0941-4467], Scheuermann, Richard H [0000-0003-1355-892X], Schotsaert, Michael [0000-0003-3156-3132], Schultz-Cherry, Stacey [0000-0002-2021-727X], Seder, Robert A [0000-0003-3133-0849], Shabman, Reed S [0000-0003-3272-3484], Shi, Pei-Yong [0000-0001-5553-1616], Simon, Viviana [0000-0002-6416-5096], Thackray, Larissa B [0000-0002-9380-6569], Thomas, Paul G [0000-0001-7955-0256], Trifkovic, Sanja [0000-0002-0710-9514], Türeli, Sina [0000-0001-7342-9295], van Bakel, Harm [0000-0002-1376-6916], VanBlargan, Laura A [0000-0002-8922-8946], Vincent, Leah R [0000-0001-9262-1813], Wallace, Zachary S [0000-0003-0237-501X], Wang, Pengfei [0000-0003-2454-7652], Weaver, Scott C [0000-0001-8016-8556], Webby, Richard J [0000-0002-4397-7132], Weiss, Carol D [0000-0002-9965-1289], Wentworth, David E [0000-0002-5190-980X], Weston, Stuart M [0000-0001-9840-2953], Whelan, Sean PJ [0000-0003-1564-8590], Whitener, Bradley M [0000-0001-6652-0701], Xie, Xuping [0000-0003-0918-016X], Yoon, Hyejin [0000-0002-3344-9096], Hertz, Tomer [0000-0002-0561-1578], Smith, Derek J [0000-0002-2393-1890], Diamond, Michael S [0000-0002-8791-3165], Post, Diane J [0000-0003-3890-9116], Suthar, Mehul S [0000-0002-2686-8380], Apollo - University of Cambridge Repository

المصدر: Nature

مصطلحات موضوعية: Multidisciplinary, COVID-19 Vaccines, Pharmacogenomic Variants, Virulence, SARS-CoV-2, COVID-19, Biological Evolution, Article, United States, SDG 3 - Good Health and Well-being, National Institute of Allergy and Infectious Diseases (U.S.), Animals, Humans, Pandemics

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8e896e07b5a30bbcb962870bf7aaa91b
https://www.repository.cam.ac.uk/handle/1810/335637