المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

المصدر: PLoS Computational Biology, Vol 19, Iss 11 (2023)

مصطلحات موضوعية: Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10664872/?tool=EBI; https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

URL الوصول: https://doaj.org/article/e139084dcf2b4262aa8c660d6f901225

المؤلفون: Theresa L. Montgomery, Korin Eckstrom, Katarina H. Lile, Sydney Caldwell, Eamonn R. Heney, Karolyn G. Lahue, Angelo D’Alessandro, Matthew J. Wargo, Dimitry N. Krementsov

المصدر: Microbiome, Vol 10, Iss 1, Pp 1-27 (2022)

مصطلحات موضوعية: L. reuteri, Microbiome, Microbiota, Tryptophan, Multiple sclerosis, Experimental autoimmune encephalomyelitis (EAE), Microbial ecology, QR100-130

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2049-2618

URL الوصول: https://doaj.org/article/b0f89444d3ed4dc3bfc3d0b6302023af

المؤلفون: Marta Kokoszynska, Niki D. Ubags, Joseph J. Bivona III, Sebastian Ventrone, Leah F. Reed, Anne E. Dixon, Matthew J. Wargo, Matthew E. Poynter, Benjamin T. Suratt

المصدر: Physiological Reports, Vol 9, Iss 22, Pp n/a-n/a (2021)

مصطلحات موضوعية: Physiology, QP1-981

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2051-817X

URL الوصول: https://doaj.org/article/97e72e2c38bc4d018834a6dcd11d9181

المؤلفون: Matthew J. Wargo

المصدر: mBio, Vol 10, Iss 3 (2019)

مصطلحات موضوعية: biofilm, cystic fibrosis, drinking water microbiology, Pseudomonas, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2150-7511

URL الوصول: https://doaj.org/article/611678e26c424afba048babd988d01cb

المؤلفون: Jamie A. Meadows, Matthew J. Wargo

المصدر: mSphere, Vol 3, Iss 1 (2018)

مصطلحات موضوعية: metabolism, osmoprotectant, quaternary amine, transcriptional regulation, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2379-5042

URL الوصول: https://doaj.org/article/23a29628126c43a19e49dc8308ea2ff9

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/journal_contribution/All_null_ensemble_distributions_from_the_configuration_model_of_diarrheal_stools_for_pathogen_pairs_appearing_10_times_/24627560

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.s003
https://figshare.com/articles/journal_contribution/All_null_ensemble_distributions_from_the_configuration_model_of_diarrheal_stools_for_pathogen_pairs_appearing_10_times_/24627560

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/journal_contribution/All_null_ensemble_distributions_from_the_configuration_model_of_asymptomatic_stools_for_pathogen_pairs_appearing_10_times_/24627557

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.s002
https://figshare.com/articles/journal_contribution/All_null_ensemble_distributions_from_the_configuration_model_of_asymptomatic_stools_for_pathogen_pairs_appearing_10_times_/24627557

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/journal_contribution/Top_12_pathogen_pairs_in_asymptomatic_stools_ranked_by_their_deviation_from_the_ensemble_of_random_graphs_showing_the_number_of_co-occurrences_and_the_occurrence_as_a_percent_out_of_diarrheal_stools_/24627572

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.s007
https://figshare.com/articles/journal_contribution/Top_12_pathogen_pairs_in_asymptomatic_stools_ranked_by_their_deviation_from_the_ensemble_of_random_graphs_showing_the_number_of_co-occurrences_and_the_occurrence_as_a_percent_out_of_diarrheal_stools_/24627572

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/journal_contribution/Top_12_pathogen_pairs_in_asymptomatic_stools_ranked_by_their_deviation_from_the_ensemble_of_random_graphs_showing_the_number_of_co-occurrences_and_the_occurrence_as_a_percent_out_of_asymptomatic_stools_/24627569

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.s006
https://figshare.com/articles/journal_contribution/Top_12_pathogen_pairs_in_asymptomatic_stools_ranked_by_their_deviation_from_the_ensemble_of_random_graphs_showing_the_number_of_co-occurrences_and_the_occurrence_as_a_percent_out_of_asymptomatic_stools_/24627569

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/journal_contribution/Comparison_with_HOLMES_a_networked_i_i_sup_2_sup_test_42_/24627566

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.s005
https://figshare.com/articles/journal_contribution/Comparison_with_HOLMES_a_networked_i_i_sup_2_sup_test_42_/24627566

المؤلفون: Jake Tristano, David R. Danforth, Matthew J. Wargo, Keith P. Mintz

المصدر: Molecular Oral Microbiology. 38:237-250

مصطلحات موضوعية: Microbiology (medical), Immunology, General Dentistry, Microbiology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::281596a38ef4d840193f46e5205acaff
https://doi.org/10.1111/omi.12410

المؤلفون: Andrea Foote, Kristin Schutz, Zirui Zhao, Pauline DiGianivittorio, Bethany R. Korwin-Mihavics, John J. LiPuma, Matthew J. Wargo

المصدر: Microbiology Spectrum. 11

مصطلحات موضوعية: Microbiology (medical), Infectious Diseases, General Immunology and Microbiology, Ecology, Physiology, Genetics, Cell Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::3373e0d1fa9ee27abc92f49b0fbc077c
https://doi.org/10.1128/spectrum.04105-22

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/figure/Summary_of_the_major_pairwise_co-occurrence_signal_identified_in_this_paper_/24627590

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.g006
https://figshare.com/articles/figure/Summary_of_the_major_pairwise_co-occurrence_signal_identified_in_this_paper_/24627590

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/figure/Histograms_of_number_of_distinct_pathogens_per_observation_in_both_studies_/24627575

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.g001
https://figshare.com/articles/figure/Histograms_of_number_of_distinct_pathogens_per_observation_in_both_studies_/24627575

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/figure/Pathogen_prevalence_for_individual_pathogens_found_in_top_pathogen_pairs_in_asymptomatic_or_diarrheal_stools_ranked_by_their_deviance_from_the_null_ensemble_/24627554

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.s001
https://figshare.com/articles/figure/Pathogen_prevalence_for_individual_pathogens_found_in_top_pathogen_pairs_in_asymptomatic_or_diarrheal_stools_ranked_by_their_deviance_from_the_null_ensemble_/24627554

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/figure/Time_partitioned_networks_generated_by_partitioning_stool_samples_based_on_age_at_collection_/24627563

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.s004
https://figshare.com/articles/figure/Time_partitioned_networks_generated_by_partitioning_stool_samples_based_on_age_at_collection_/24627563

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/figure/Top_12_ranked_pairwise_co-infections_in_asymptomatic_stools_/24627578

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.g002
https://figshare.com/articles/figure/Top_12_ranked_pairwise_co-infections_in_asymptomatic_stools_/24627578

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/figure/Pairs_with_rotavirus_have_discordant_significance_between_the_studies_/24627584

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.g004
https://figshare.com/articles/figure/Pairs_with_rotavirus_have_discordant_significance_between_the_studies_/24627584

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/figure/Top_12_ranked_pairwise_co-infections_in_diarrheal_stools_/24627581

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.g003
https://figshare.com/articles/figure/Top_12_ranked_pairwise_co-infections_in_diarrheal_stools_/24627581

المؤلفون: E. Ross Colgate, Connor Klopfer, Dorothy M. Dickson, Benjamin Lee, Matthew J. Wargo, Ashraful Alam, Beth D. Kirkpatrick, Laurent Hébert-Dufresne

مصطلحات موضوعية: Medicine, Microbiology, Biotechnology, Ecology, Infectious Diseases, Computational Biology, Space Science, Environmental Sciences not elsewhere classified, Biological Sciences not elsewhere classified, Mathematical Sciences not elsewhere classified, eliminate common sources, determine biologic mechanisms, despite significant progress, asymptomatic stool specimens, infections among infants, multiple enteric pathogens, spp ., co, revealed widespread co, chance alone ), infants without co, enteric pathogen co, div >< p, diarrheal disease globally, childhood diarrhea remains, appear less frequently, infection among infants, found two pairs, bacteria pairs tend, expected random co

Relation: https://figshare.com/articles/dataset/Standard_Deviations_for_pathogen_pairs_ranked_in_top_12_for_both_asymptomatic_and_diarrheal_stools_by_study_/24627596

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011624.t002
https://figshare.com/articles/dataset/Standard_Deviations_for_pathogen_pairs_ranked_in_top_12_for_both_asymptomatic_and_diarrheal_stools_by_study_/24627596