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1Academic Journal
المؤلفون: Simon Dirmeier, Mario Emmenlauer, Christoph Dehio, Niko Beerenwinkel
المصدر: BMC Bioinformatics, Vol 20, Iss 1, Pp 1-6 (2019)
مصطلحات موضوعية: Big data, Data analysis, Command line, Pipeline, Computing cluster, Grid engine, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
وصف الملف: electronic resource
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2Academic Journal
المؤلفون: Michael Bauer, Justin W. Flatt, Daria Seiler, Bettina Cardel, Mario Emmenlauer, Karin Boucke, Maarit Suomalainen, Silvio Hemmi, Urs F. Greber
المصدر: Cell Reports, Vol 29, Iss 12, Pp 3785-3795.e8 (2019)
مصطلحات موضوعية: Biology (General), QH301-705.5
وصف الملف: electronic resource
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3Academic Journal
المؤلفون: Alain Casanova, Shyan Huey Low, Maxime Québatte, Jaroslaw Sedzicki, Therese Tschon, Maren Ketterer, Kevin Smith, Mario Emmenlauer, Houchaima Ben-Tekaya, Christoph Dehio
المصدر: mSphere, Vol 4, Iss 3 (2019)
مصطلحات موضوعية: Brucella, RAB7A, VPS retromer, VPS26, VPS35, replicative niche, Microbiology, QR1-502
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2379-5042
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4Academic Journal
المؤلفون: Milica Milivojevic, Anne-Sophie Dangeard, Christoph Alexander Kasper, Therese Tschon, Mario Emmenlauer, Claudine Pique, Pamela Schnupf, Julie Guignot, Cécile Arrieumerlou
المصدر: PLoS Pathogens, Vol 13, Iss 2, p e1006224 (2017)
مصطلحات موضوعية: Immunologic diseases. Allergy, RC581-607, Biology (General), QH301-705.5
وصف الملف: electronic resource
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5Academic Journal
المؤلفون: Daniel Andritschke, Sabrina Dilling, Mario Emmenlauer, Tobias Welz, Fabian Schmich, Benjamin Misselwitz, Pauli Rämö, Klemens Rottner, Eugen Kerkhoff, Teiji Wada, Josef M Penninger, Niko Beerenwinkel, Peter Horvath, Christoph Dehio, Wolf-Dietrich Hardt
المصدر: PLoS ONE, Vol 11, Iss 9, p e0161965 (2016)
وصف الملف: electronic resource
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6Academic Journal
المؤلفون: Andreas Kühbacher, Mario Emmenlauer, Pauli Rämo, Natasha Kafai, Christoph Dehio, Pascale Cossart, Javier Pizarro-Cerdá
المصدر: mBio, Vol 6, Iss 3 (2015)
مصطلحات موضوعية: Microbiology, QR1-502
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2150-7511
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7Academic Journal
المؤلفون: Juliane Siebourg-Polster, Daria Mudrak, Mario Emmenlauer, Pauli Rämö, Christoph Dehio, Urs Greber, Holger Fröhlich, Niko Beerenwinkel
المصدر: PLoS Computational Biology, Vol 11, Iss 4, p e1004078 (2015)
مصطلحات موضوعية: Biology (General), QH301-705.5
وصف الملف: electronic resource
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8
المؤلفون: Yang Mi, Christoph Dehio, Hu Zhou, Audrey van Drogen, Martin Mehnert, Michael Seifert, Torsten Mueller, Christelle Borel, Pierre-Luc Germain, Yansheng Liu, Mario Emmenlauer, Max Frank, Wolf-Dietrich Hardt, Isabell Bludau, Stylianos E. Antonarakis, Saskia Kreibich, Ruedi Aebersold, Isabel Sorg, Fedor Bezrukov, Frédérique Béna, Evan G. Williams, Julio Saez-Rodriguez, Giuseppe Testa
المصدر: Nature Biotechnology, 37 (3)
Nature Biotechnologyمصطلحات موضوعية: DNA Copy Number Variations, Proteome, Biomedical Engineering, Bioengineering, Genomics, Biology, Applied Microbiology and Biotechnology, Transcriptome, HeLa, 03 medical and health sciences, 0302 clinical medicine, Humans, 030304 developmental biology, 0303 health sciences, Genome, Human, Protein turnover, Reproducibility of Results, biology.organism_classification, Phenotype, Cell biology, Cell culture, Molecular Medicine, Human genome, 030217 neurology & neurosurgery, HeLa Cells, Biotechnology
وصف الملف: application/application/pdf
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9
المؤلفون: Sumana Srivatsa, Jack Kuipers, Niko Beerenwinkel, Fabian Schmich, Christoph Dehio, Simone Eicher, Mario Emmenlauer
المصدر: Bioinformatics
Bioinformatics, 34 (13)مصطلحات موضوعية: 0301 basic medicine, Statistics and Probability, Small interfering RNA, Computer science, Inference, Computational biology, Adaptive simulated annealing, Biochemistry, 03 medical and health sciences, 0302 clinical medicine, RNA interference, Search algorithm, Gene Knockdown Techniques, Humans, heterocyclic compounds, Graphical model, RNA, Small Interfering, Molecular Biology, Gene, Ismb 2018–Intelligent Systems for Molecular Biology Proceedings, Gene knockdown, Nanoelectromechanical systems, Models, Statistical, Probabilistic logic, Computational Biology, RNA, Computer Science Applications, Computational Mathematics, 030104 developmental biology, Computational Theory and Mathematics, Systems Biology and Networks, RNA Interference, Signal transduction, Algorithms, Software, 030217 neurology & neurosurgery, Signal Transduction
وصف الملف: application/pdf; application/application/pdf
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10
المؤلفون: Peter Steneteg, Rickard Englund, Martin Falk, Daniel Jönsson, eriksunden, Inviwo Team, Dominik Engel, Anke, Jochen Jankowai, Albin Bergström, mstegmaier, sathishkottravel, scanberg, Tino Weinkauf, sigsid, Martin Turcotte, nataxe, Wiebke Köpp, Robert Cranston, ElvisJakobsson, Mario Emmenlauer, MutterOberin, tonghao.yuan, Julian Kreiser, Benjamin Schlechter, Jesper Ericsson, Rickard Armiento, Timo Ropinski, Imagia Viz, Himangshu Saikia
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11
المؤلفون: Christoph Dehio, Mario Emmenlauer, Simon Dirmeier, Niko Beerenwinkel
المصدر: BMC Bioinformatics, 20 (1)
BMC Bioinformatics
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-6 (2019)مصطلحات موضوعية: Schedule, Computer science, Big data, Data analysis, 02 engineering and technology, lcsh:Computer applications to medicine. Medical informatics, computer.software_genre, Biochemistry, Computing Methodologies, Command line, Pipeline, Computing cluster, Grid engine, Machine learning, 03 medical and health sciences, Automation, Software, Structural Biology, 020204 information systems, Computer cluster, Spark (mathematics), 0202 electrical engineering, electronic engineering, information engineering, Image Processing, Computer-Assisted, Humans, lcsh:QH301-705.5, Molecular Biology, 030304 developmental biology, 0303 health sciences, Biological data, business.industry, Applied Mathematics, Computational Biology, Pipeline (software), Computer Science Applications, Data set, Data point, lcsh:Biology (General), lcsh:R858-859.7, Data mining, DNA microarray, business, computer, Algorithms, HeLa Cells
وصف الملف: application/application/pdf; application/pdf
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12
المؤلفون: Urs F. Greber, Abhilash Kannan, Simone Eicher, Neha Daga, Wolf-Dietrich Hardt, Jeremy L. Jenkins, Saskia Kreibich, Daniel Andritschke, Alain Casanova, Christoph Dehio, Shyan Huey Low, Mario Emmenlauer, Christian von Mering
المساهمون: University of Zurich, von Mering, Christian
المصدر: Nucleic Acids Research, 46 (18)
Nucleic Acids Researchمصطلحات موضوعية: 0301 basic medicine, Small interfering RNA, Cell Survival, Gene Expression, Biology, Transfection, Cell Line, Mice, 03 medical and health sciences, 0302 clinical medicine, 1311 Genetics, RNA interference, Gene expression, microRNA, Genetics, Animals, Humans, RNA, Small Interfering, Gene, Cells, Cultured, Cell Proliferation, Computational Biology, Nucleic Acid Hybridization, RNA, Fibroblasts, Embryo, Mammalian, 10124 Institute of Molecular Life Sciences, Cell biology, MicroRNAs, 030104 developmental biology, A549 Cells, Cell culture, 030220 oncology & carcinogenesis, 570 Life sciences, biology, RNA Interference, HeLa Cells
وصف الملف: application/application/pdf; ZORA153746.pdf - application/pdf; 646.pdf - application/pdf; application/pdf
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13
المؤلفون: Ruedi Aebersold, Isabel Sorg, Hui-Xia Zhou, Stylianos E. Antonarakis, Wolf-Dietrich Hardt, Yansheng Liu, Christelle Borel, Isabell Bludau, Christoph Dehio, Fedor Bezrukov, Y Mi, Michael Seifert, A Drogen Van, Mario Emmenlauer, Max Frank, Giuseppe Testa, Pierre-Luc Germain, Evan G. Williams, F Bena Sloan, Martin Mehnert, T Mueller, Julio Saez-Rodriguez, Saskia Kreibich
مصطلحات موضوعية: 0303 health sciences, Genetic heterogeneity, Systems biology, Protein turnover, Computational biology, Biology, Phenotype, Transcriptome, 03 medical and health sciences, Tissue culture, 0302 clinical medicine, Cell culture, 030220 oncology & carcinogenesis, Proteome, 030304 developmental biology
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14
المؤلفون: Pauli Rämö, Wolf-Dietrich Hardt, Christoph Dehio, Christian Münz, Mario Emmenlauer, Jennifer Fredlund, Jost Enninga, Saskia Kreibich
المساهمون: Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), University of Basel (Unibas), Dynamique des Interactions Hôte-Pathogène - Dynamics of Host-Pathogen Interactions, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Universität Zürich [Zürich] = University of Zurich (UZH), The work was funded by SystemsX.ch, the Swiss Initiative in Systems Biology, RTD grants 51RT-0_126008 (InfectX) and 51RTP0_151029 (TargetInfectX), evaluated by the Swiss National Science Foundation and Swiss National Science Foundation grant 310030_153074/1 to W.D.H. Further support was received from SyBIT, the IT project of SystemsX. J.E. is a member of the LabEx consortium IBEID and is supported by the Institut Pasteur CARNOT-MIE programme and an ERC starting grant (Rupteffects, No. 261166). J.F. was supported by a Pasteur Foundation fellowship., We thank F. Randow, D.W. Holden, M.E. Sellin, Hardt lab members, and the members of InfectX/TargetInfectX and ScopeM, i.e., F. Schmich, D. Andritschke, and J. Mercer (also for marker constructs), for help with the GWS and in-depth discussions. M. Sachse, J. Krijnse-Locker (Institut Pasteur Ultrapole), and A. Weiner provided invaluable help with correlative EM., ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), European Project: 261166,EC:FP7:ERC,ERC-2010-StG_20091118,RUPTEFFECTS(2011), University of Zurich, Hardt, Wolf-Dietrich, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)
المصدر: Cell host & microbe
Cell Host and Microbe
Cell Host and Microbe, Elsevier, 2015, 18 (5), pp.527-537. ⟨10.1016/j.chom.2015.10.015⟩
Cell Host & Microbe
Cell Host and Microbe, 2015, 18 (5), pp.527-537. ⟨10.1016/j.chom.2015.10.015⟩
Cell Host & Microbe, 18 (5)مصطلحات موضوعية: Salmonella typhimurium, Cancer Research, Virulence Factors, Endosome, ATG5, 2405 Parasitology, 610 Medicine & health, Endosomes, Vacuole, Biology, 10263 Institute of Experimental Immunology, Microbiology, MESH: Membranes, Endosome membrane, Cell Line, Type three secretion system, Mice, MESH: Type III Secretion Systems, Virology, Immunology and Microbiology(all), [SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB], Autophagy, Type III Secretion Systems, Animals, Humans, MESH: Autophagy, Secretion, MESH: Animals, [SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM], Molecular Biology, MESH: Mice, MESH: Virulence Factors, Membranes, MESH: Humans, MESH: Salmonella Infections, 2404 Microbiology, MESH: Salmonella typhimurium, 3. Good health, Cell biology, MESH: Cell Line, Cytosol, MESH: Endosomes, Salmonella Infections, Immunology, 2406 Virology, 570 Life sciences, biology, Parasitology
وصف الملف: Kreibich et al., Cell Host Microbe 2015.pdf - application/pdf; Final manuscript.pdf - application/pdf; application/application/pdf
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15
المؤلفون: Bevan Cheeseman, Krzysztof Gonciarz, Ulrik Günther, Joel Jonsson, Mario Emmenlauer, Mateusz Susik
Relation: https://github.com/cheesema/LibAPR/tree/v1.1; https://doi.org/10.5281/zenodo.1423157; https://doi.org/10.5281/zenodo.1423158; oai:zenodo.org:1423158
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16
المؤلفون: Christian von Mering, Andreas Kaufmann, Shyan Huey Low, Mario Emmenlauer, Daniel Andritschke, Ari Helenius, Christoph Dehio, Andrea Franceschini, Neha Daga, Sabrina Dilling, Alain Casanova, Roger Meier, Saskia Kreibich, Lucas Pelkmans, Raquel Conde-Álvarez, Pauli Rämö, Wolf-Dietrich Hardt
المساهمون: University of Zurich, Helenius, Ari
المصدر: Proceedings of the National Academy of Sciences of the United States of America
Dadun. Depósito Académico Digital de la Universidad de Navarra
instname
Proceedings of the National Academy of Sciencesمصطلحات موضوعية: Salmonella typhimurium, Small interfering RNA, Bunyaviridae, Oligonucleotides, Brucella abortus, High-throughput RNAi screening, Biology, UFSP13-7 Evolution in Action: From Genomes to Ecosystems, 03 medical and health sciences, 0302 clinical medicine, RNA interference, microRNA, Humans, RNA, Small Interfering, Gene, 030304 developmental biology, Genetics, 0303 health sciences, Messenger RNA, 1000 Multidisciplinary, Multidisciplinary, Base Sequence, Antimicrobials, Oligonucleotide, Phenotype, 10124 Institute of Molecular Life Sciences, MicroRNAs, Genes, Bacterial, 030220 oncology & carcinogenesis, 570 Life sciences, biology, RNA Interference, Target mrna, U7 Systems Biology / Functional Genomics, HeLa Cells
وصف الملف: accepted_manuscript.pdf - application/pdf; PNAS-2014-Franceschini-4548-53.pdf - application/pdf; application/pdf
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17
المؤلفون: Feng Cong, Christoph Dehio, Andrea Riba, Amy Chen, Mihaela Zavolan, Mario Emmenlauer, Frederic Sigoillot, Jeremy L. Jenkins
المصدر: Cell systems. 4(2)
مصطلحات موضوعية: 0301 basic medicine, Genetics, Small interfering RNA, Histology, Cas9, Gene regulatory network, Cell Biology, Computational biology, Biology, Bone morphogenetic protein, Phenotype, Models, Biological, Pathology and Forensic Medicine, 03 medical and health sciences, 030104 developmental biology, 0302 clinical medicine, RNA interference, 030220 oncology & carcinogenesis, CRISPR, Gene Regulatory Networks, RNA Interference, Protein Interaction Maps, CRISPR-Cas Systems, RNA, Small Interfering, Gene
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18
المؤلفون: Shyan Huey Low, Mario Emmenlauer, Raquel Conde-Álvarez, Christoph Dehio, Jean-Pierre Gorvel, Alain Casanova, Suzana P. Salcedo
المصدر: Journal of Visualized Experiments.
مصطلحات موضوعية: 0301 basic medicine, General Immunology and Microbiology, biology, General Chemical Engineering, General Neuroscience, Intracellular parasite, Brucella, Vacuole, biology.organism_classification, Entry into host, General Biochemistry, Genetics and Molecular Biology, 3. Good health, Green fluorescent protein, Cell biology, 03 medical and health sciences, 030104 developmental biology, Extracellular, Intracellular, Bacteria
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19
المؤلفون: Mario Emmenlauer, Andreas Kühbacher, Natasha M. Kafai, Javier Pizarro-Cerdá, Christoph Dehio, Pauli Rämö, Pascale Cossart
المصدر: mBio, Vol 6, Iss 3 (2015)
مصطلحات موضوعية: 0303 health sciences, Cell signaling, biology, 030306 microbiology, Actin remodeling, Arp2/3 complex, macromolecular substances, Listeria infection, medicine.disease, Actin cytoskeleton, Microbiology, QR1-502, Cell biology, 03 medical and health sciences, Virology, Paracytophagy, medicine, biology.protein, Actin, 030304 developmental biology, Actin nucleation
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20
المؤلفون: Peter Bühlmann, Bernd Rinn, Vincent Rouilly, Shyan Huey Low, Christoph Dehio, Matthias C. Truttmann, Pauli Rämö, Niko Beerenwinkel, Wolf-Dietrich Hardt, Gabriel Studer, Mario Emmenlauer, Alain Casanova, Christian von Mering, Jason Mercer, Eva Pujadas, Juliane Siebourg-Polster, Cécile Arrieumerlou, Houchaima Ben-Tekaya, Michael Podvinec, Javier Pizarro-Cerdá, Artur Yakimovich, Andreas Kaufmann, Michael Stebler, Raquel Conde-Álvarez, Bettina Cardel, Simone Eicher, Fabian Schmich, Ari Helenius, Anna Drewek, Peter Z. Kunszt, Christoph Kasper, Lucas Pelkmans, Simone Muntwiler, Ewa Szczurek, Gabor Csucs, Pascale Cossart, Andreas Kühbacher, Daria Mudrak, Berend Snijder, Saskia Kreibich, Urs F. Greber, Andreas Vonderheit
المساهمون: University of Basel (Unibas), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), Université Paris Descartes - Paris 5 (UPD5), Swiss Institute of Bioinformatics [Lausanne] (SIB), Université de Lausanne = University of Lausanne (UNIL), Universität Zürich [Zürich] = University of Zurich (UZH), Universidad de Navarra [Pamplona] (UNAV), Interactions Bactéries-Cellules (UIBC), Institut National de la Recherche Agronomique (INRA)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institute of Biochemistry, Vilnius University [Vilnius], Institut National de la Recherche Agronomique (INRA), SystemsX Ch, SyBIT, Partenaires INRAE, Inst Mol Biol, Swiss Initiative for Systems Biology [51RT0_126008, 51RTP0_151029], Swiss National Science Foundation (SNSF) [31003A-132979], ERC advanced grant [340330, 233348], ANR [MIE-2009-SignRupVac], Fondation Le Roch and Fondation Jeantet, Pasteur-Paris University International Doctoral Program/Institut Carnot Maladies Infectieuses, ETH Zurich Postdoctoral Fellowship Program, Marie Curie Actions for People COFUND program [FEL-13 12-1], SystemsX.ch, Swiss initiative in systems biology, under IPhd [2009/025], International PhD Program 'Fellowships for Excellence' of the Biozentrum, grant SystemsX iPhD, grant Novartis: Stiftung fur Medizinisch-Biologische Forschung, University of Zurich: Bauten und Investitionen, SNSF [31003A_141222/1], iPhD fellowship [SXPHIO_142001/1], University of Zurich, Dehio, Christoph, Université de Lausanne (UNIL)
المصدر: BMC genomics
BMC Genomics, 15
BMC Genomics (15), article 1162 (18 p.). (2014)
BMC Genomics
BMC Genomics, 2014, 15, article 1162 (18 p.). ⟨10.1186/1471-2164/15/1162⟩
BMC Genomics, BioMed Central, 2014, 15, article 1162 (18 p.). ⟨10.1186/1471-2164/15/1162⟩مصطلحات موضوعية: Small interfering RNA, base de séquences, hit detection, [SDV]Life Sciences [q-bio], arn i, Genomics, Computational biology, Biology, Proteomics, Cell Line, 1311 Genetics, RNA interference, High-Throughput Screening Assays, Genetics, Humans, RNA, Small Interfering, Gene Library, Effector, high-throughput high-content RNAi screening, Scale (chemistry), screening, Reproducibility of Results, pathogen entry, linear mixed model, 10124 Institute of Molecular Life Sciences, ROC Curve, Host-Pathogen Interactions, High-throughput high-content RNAi screening, Pathogen entry, Linear mixed model, Hit detection, 1305 Biotechnology, 570 Life sciences, biology, RNA Interference, DNA microarray, Biotechnology, Research Article
وصف الملف: application/pdf; application/application/pdf; 464.pdf - application/pdf; 103796.pdf - application/pdf