المؤلفون: Sego, T. J., König, Matthias, Fonseca, Luis L., Fain, Baylor, Knapp, Adam C., Tiwari, Krishna, Hermjakob, Henning, Sauro, Herbert M., Glazier, James A., Laubenbacher, Reinhard C., Malik-Sheriff, Rahuman S.

مصطلحات موضوعية: Statistics - Methodology

URL الوصول: http://arxiv.org/abs/2406.16820

المؤلفون: Niarakis, Anna, Laubenbacher, Reinhard, An, Gary, Ilan, Yaron, Fisher, Jasmin, Flobak, Åsmund, Reiche, Kristin, Rodríguez Martínez, María, Geris, Liesbet, Maia Ladeira, Luiz Carlos, Veschini, Lorenzo, Blinov, Michael L, Messina, Francesco, Fonseca, Luis L, Ferreira, Sandra, Montagud, Arnau, Noël, Vincent, Marku, Malvina, Tsirvouli, Eirini, Torres, Marcella M, Harris, Leonard A, Sego, T J, Cockrell, Chase, Shick, Amanda E, Balci, Hasan, Salazar, Albin, Rian, Kinza, Hemedan, Ahmed Abdelmonem, Esteban-Medina, Marina, Staumont, Bernard, Hernandez-Vargas, Esteban, Martis B, Shiny, Madrid-Valiente, Alejandro, Karampelesis, Panagiotis, Sordo Vieira, Luis, Harlapur, Pradyumna, Kulesza, Alexander, Nikaein, Niloofar, Garira, Winston, Malik Sheriff, Rahuman S, Thakar, Juilee, Tran, Van Du T, Carbonell-Caballero, Jose, Safaei, Soroush, Valencia, Alfonso, Zinovyev, Andrei, Glazier, James A

المصدر: NPJ Systems Biology and Applications, 10 (1), 141 (2024-11-30)

مصطلحات موضوعية: Humans, Immune System/immunology, Computer Simulation, Drug Discovery/methods, Precision Medicine/methods, Drug Discovery, Immune System, Precision Medicine, Modeling and Simulation, Biochemistry, Genetics and Molecular Biology (all), Computer Science Applications, Applied Mathematics, Engineering, computing & technology, Ingénierie, informatique & technologie

Relation: https://www.nature.com/articles/s41540-024-00450-5.pdf; urn:issn:2056-7189

URL الوصول: https://orbi.uliege.be/handle/2268/327182

المؤلفون: Silberberg, Mauro, Hermjakob, Henning, Malik-Sheriff, Rahuman S, Grecco, Hernán E

المساهمون: Martelli, Pier Luigi, Agencia I+D+i, Universidad de Buenos Aires

المصدر: Bioinformatics ; volume 40, issue 8 ; ISSN 1367-4811

الاتاحة: http://dx.doi.org/10.1093/bioinformatics/btae465
https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae465/58689564/btae465.pdf
https://academic.oup.com/bioinformatics/article-pdf/40/8/btae465/58749756/btae465.pdf

المؤلفون: Malik Sheriff, Rahuman S., Asari, Hiroki, Hermjakob, Henning, Huber, Wolfgang, Quail, Thomas, Santos, Silvia D. M., Smith, Amber M., Uhlmann, Virginie

المساهمون: European Molecular Biology Laboratory

المصدر: Frontiers in Systems Biology ; volume 4 ; ISSN 2674-0702

الاتاحة: http://dx.doi.org/10.3389/fsysb.2024.1363884
https://www.frontiersin.org/articles/10.3389/fsysb.2024.1363884/full

المؤلفون: Keating, Sarah M, Waltemath, Dagmar, König, Matthias, Zhang, Fengkai, Dräger, Andreas, Chaouiya, Claudine, Bergmann, Frank T, Finney, Andrew, Gillespie, Colin S, Helikar, Tomáš, Hoops, Stefan, Malik-Sheriff, Rahuman S, Moodie, Stuart L, Moraru, Ion I, Myers, Chris J, Naldi, Aurélien, Olivier, Brett G, Sahle, Sven, Schaff, James C, Smith, Lucian P, Swat, Maciej J, Thieffry, Denis, Watanabe, Leandro, Wilkinson, Darren J, Blinov, Michael L, Begley, Kimberly, Faeder, James R, Gómez, Harold F, Hamm, Thomas M, Inagaki, Yuichiro, Liebermeister, Wolfram, Lister, Allyson L, Lucio, Daniel, Mjolsness, Eric, Proctor, Carole J, Raman, Karthik, Rodriguez, Nicolas, Shaffer, Clifford A, Shapiro, Bruce E, Stelling, Joerg, Swainston, Neil, Tanimura, Naoki, Wagner, John, Meier-Schellersheim, Martin, Sauro, Herbert M, Palsson, Bernhard, Bolouri, Hamid, Kitano, Hiroaki, Funahashi, Akira, Hermjakob, Henning, Doyle, John C, Hucka, Michael, SBML Level 3 Community members

المصدر: Molecular systems biology. 16(8)

مصطلحات موضوعية: SBML Level 3 Community members, Animals, Humans, Logistic Models, Systems Biology, Models, Biological, Software, computational modeling, file format, interoperability, reproducibility, systems biology, Bioengineering, Networking and Information Technology R&D, Bioinformatics, Biochemistry and Cell Biology, Other Biological Sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/5ch1p9qq

المؤلفون: Lieven, Christian, Beber, Moritz E., Olivier, Brett G., Bergmann, Frank T., Ataman, M., Babaei, Parizad, 1990, Bartell, Jennifer A., Blank, L. M., Chauhan, Siddharth, Correia, Kevin, Diener, Christian, Dräger, Andreas, Ebert, B. E., Edirisinghe, Janaka N., Faria, José P., Feist, Adam M., Fengos, Georgios, Fleming, R. M. T., García-Jiménez, Beatriz, Hatzimanikatis, V., van Helvoirt, Wout, Henry, Christopher S., Hermjakob, Henning, Herrgard, M. J., Kaafarani, Ali, Kim, Hyun Uk, King, Zachary, Klamt, Steffen, Klipp, Edda, Koehorst, Jasper J., König, Matthias, Lakshmanan, Meiyappan, Lee, Dong Yup, Lee, Sang Yup, Lee, Sunjae, Lewis, Nathan E., Liu, Filipe, Ma, Hongwu, Machado, Daniel, Mahadevan, Radhakrishnan, Maia, P., Mardinoglu, Adil, 1982, Medlock, Gregory L., Monk, Jonathan M., Nielsen, Jens B, 1962, Nielsen, Lars Keld, Nogales, Juan, Nookaew, Intawat, 1977, Palsson, Bernhard O., Papin, J. A., Patil, K. R., Poolman, Mark, Price, Nathan D., Resendis-Antonio, Osbaldo, Richelle, Anne, Rocha, I., Sánchez, Benjamín José, 1988, Schaap, P. J., Malik Sheriff, Rahuman S., Shoaie, Saeed, 1985, Sonnenschein, N., Teusink, B., Vilaca, P., Vik, Jon Olav, Wodke, J. A. H., Xavier, Joana C., Yuan, Qianqian, Zakhartsev, Maksim, Zhang, Cheng

المصدر: Nature Biotechnology. 38(3):272-276

وصف الملف: electronic

URL الوصول: https://research.chalmers.se/publication/515995
https://research.chalmers.se/publication/515995/file/515995_Fulltext.pdf

المؤلفون: Waltemath Dagmar, Golebiewski Martin, Blinov Michael L, Gleeson Padraig, Hermjakob Henning, Hucka Michael, Inau Esther Thea, Keating Sarah M, König Matthias, Krebs Olga, Malik-Sheriff Rahuman S, Nickerson David, Oberortner Ernst, Sauro Herbert M, Schreiber Falk, Smith Lucian, Stefan Melanie I, Wittig Ulrike, Myers Chris J

المصدر: Journal of Integrative Bioinformatics, Vol 17, Iss 2-3, Pp 19-895 (2020)

مصطلحات موضوعية: combine, community building, meeting report, standardization, Biotechnology, TP248.13-248.65

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1613-4516

URL الوصول: https://doaj.org/article/3095111417c745328ed4dceb6bee80ef

المؤلفون: Karr, Jonathan, Malik-Sheriff, Rahuman S., Osborne, James, Gonzalez-Parra, Gilberto, Forgoston, Eric, Bowness, Ruth, Liu, Yaling, Thompson, Robin, Garira, Winston, Barhak, Jacob, Rice, John, Torres, Marcella, Dobrovolny, Hana M., Tang, Tingting, Waites, William, Glazier, James A., Faeder, James R., Kulesza, Alexander

مصطلحات موضوعية: Electronic computers. Computer science, Mathematics, Immunology, Biology

وصف الملف: text

Relation: https://strathprints.strath.ac.uk/79975/1/Karr_etal_FSB_2022_Model_integration_in_computational_biology_the_role_of_reproducibility_credibility_utility.pdf; Karr, Jonathan and Malik-Sheriff, Rahuman S. and Osborne, James and Gonzalez-Parra, Gilberto and Forgoston, Eric and Bowness, Ruth and Liu, Yaling and Thompson, Robin and Garira, Winston and Barhak, Jacob and Rice, John and Torres, Marcella and Dobrovolny, Hana M. and Tang, Tingting and Waites, William and Glazier, James A. and Faeder, James R. and Kulesza, Alexander (2022 ) Model integration in computational biology : the role of reproducibility, credibility and utility. Frontiers in Systems Biology , 2. 822606. ISSN 2674-0702

الاتاحة: https://strathprints.strath.ac.uk/79975/
https://strathprints.strath.ac.uk/79975/1/Karr_etal_FSB_2022_Model_integration_in_computational_biology_the_role_of_reproducibility_credibility_utility.pdf
https://doi.org/10.3389/fsysb.2022.822606

المؤلفون: Füzi, Barbara, Malik-Sheriff, Rahuman S., Manners, Emma J., Hermjakob, Henning, Ecker, Gerhard F.

المساهمون: Innovative Medicines Initiative 2, European Union’s Horizon 2020 Research and Innovation Programme, European Federation of Pharmaceutical Industries and Associations, Austrian Science Fund/FWF, EMBL core funding, Wellcome Trust, Member States of the European Molecular Biology Laboratory

المصدر: Journal of Cheminformatics ; volume 14, issue 1 ; ISSN 1758-2946

الاتاحة: http://dx.doi.org/10.1186/s13321-022-00615-6
https://link.springer.com/content/pdf/10.1186/s13321-022-00615-6.pdf
https://link.springer.com/article/10.1186/s13321-022-00615-6/fulltext.html

المؤلفون: Tiwari, Krishna, Kananathan, Sarubini, Roberts, Matthew G, Meyer, Johannes P, Sharif Shohan, Mohammad Umer, Xavier, Ashley, Maire, Matthieu, Zyoud, Ahmad, Men, Jinghao, Ng, Szeyi, Nguyen, Tung V N, Glont, Mihai, Hermjakob, Henning, Malik‐Sheriff, Rahuman S

المصدر: Molecular Systems Biology ; volume 17, issue 2 ; ISSN 1744-4292 1744-4292

الاتاحة: http://dx.doi.org/10.15252/msb.20209982
https://onlinelibrary.wiley.com/doi/pdf/10.15252/msb.20209982
https://onlinelibrary.wiley.com/doi/full-xml/10.15252/msb.20209982
https://www.embopress.org/doi/pdf/10.15252/msb.20209982

المؤلفون: Cantelli, Gaia, Bateman, Alex, Brooksbank, Cath, Petrov, Anton I, Malik-Sheriff, Rahuman S, Ide-Smith, Michele, Hermjakob, Henning, Flicek, Paul, Apweiler, Rolf, Birney, Ewan, McEntyre, Johanna

المساهمون: EMBL-EBI, European Commission, Wellcome, UK Research and Innovation, National Institutes of Health, BBSRC

المصدر: Nucleic Acids Research ; volume 50, issue D1, page D11-D19 ; ISSN 0305-1048 1362-4962

الاتاحة: http://dx.doi.org/10.1093/nar/gkab1127
https://academic.oup.com/nar/article-pdf/50/D1/D11/42057538/gkab1127.pdf

المؤلفون: Keating, Sarah, Bergmann, Frank, Helikar, Tomáš, Malik‐sheriff, Rahuman, Moraru, Ion, Meier‐schellersheim, Martin, Adams, Richard, Allen, Nicholas, Angermann, Bastian, Antoniotti, Marco, Bader, Gary, D., Červený, Jan, Courtot, Mélanie, Cox, Chris, Dalle Pezze, Piero, Demir, Emek, Denney, William, Dharuri, Harish, Dorier, Julien, Drasdo, Dirk, Ebrahim, Ali, Eichner, Johannes, Elf, Johan, Endler, Lukas, Evelo, Chris, Flamm, Christoph, Fleming, Ronan Mt, Fröhlich, Martina, Glont, Mihai, Gonçalves, Emanuel, Golebiewski, Martin, Grabski, Hovakim, Gutteridge, Alex, Hachmeister, Damon, Harris, Leonard, Heavner, Benjamin, Henkel, Ron, Hlavacek, William, Hu, Bin, Hyduke, Daniel, Jong, Hidde, De, Juty, Nick, Karp, Peter, Karr, Jonathan, Kell, Douglas, Keller, Roland, Kiselev, Ilya, Klamt, Steffen, Klipp, Edda, Knüpfer, Christian, Kolpakov, Fedor, Krause, Falko, Kutmon, Martina, Laibe, Camille, Lawless, Conor, Li, Lu, Loew, Leslie, Machne, Rainer, Matsuoka, Yukiko, Mendes, Pedro, S. F., Mi, Huaiyu, Mittag, Florian, Monteiro, Pedro, Natarajan, Kedar Nath, Nielsen, Poul Mf, Nguyen, Tramy, Palmisano, Alida, Pettit, Jean‐baptiste, Pfau, Thomas, Phair, Robert, Radivoyevitch, Tomas, Rohwer, Johann, Ruebenacker, Oliver, Saez‐rodriguez, Julio, Scharm, Martin, Schmidt, Henning, Schreiber, Falk, Schubert, Michael, Schulte, Roman, Sealfon, Stuart, Smallbone, Kieran, Soliman, Sylvain, Stefan, Melanie, I., Sullivan, Devin, Takahashi, Koichi, Teusink, Bas, Tolnay, David, Vazirabad, Ibrahim, Kamp, Axel, Wittig, Ulrike, Wrzodek, Clemens, Waltemath, Dagmar, Wrzodek, Finja, Xenarios, Ioannis, Zhukova, Anna, Zucker, Jeremy, König, Matthias, Zhang, Fengkai, Dräger, Andreas, Chaouiya, Claudine, Bergmann, Frank, T, Finney, Andrew, Gillespie, Colin, S., Hoops, Stefan, Malik-Sheriff, Rahuman, S, Moodie, Stuart, L, Myers, Chris, Naldi, Aurélien, Olivier, Brett, G, Sahle, Sven, Schaff, James, C, Smith, Lucian, P, Swat, Maciej, J, Thieffry, Denis, Watanabe, Leandro, Wilkinson, Darren, Blinov, Michael, L, Begley, Kimberly, Faeder, James, R, Gómez, Harold, F, Hamm, Thomas, M, Inagaki, Yuichiro, Liebermeister, Wolfram, Lister, Allyson, L, Lucio, Daniel, Mjolsness, Eric, Proctor, Carole, Raman, Karthik, Rodriguez, Nicolas, Shaffer, Clifford, A, Shapiro, Bruce, Stelling, Joerg, Swainston, Neil, Tanimura, Naoki, Wagner, John, Meier-Schellersheim, Martin, Sauro, Herbert, M, Palsson, Bernhard, O, Bolouri, Hamid, Kitano, Hiroaki, Funahashi, Akira, Hermjakob, Henning, Doyle, John, C, Hucka, Michael

المساهمون: European Bioinformatics Institute Hinxton (EMBL-EBI), EMBL Heidelberg, Heidelberg University Hospital Heidelberg, Swiss Institute of Bioinformatics Lausanne (SIB), Université de Lausanne = University of Lausanne (UNIL), European Molecular Biology Laboratory (EMBL), University of Connecticut (UCONN), National Institutes of Health Bethesda, MD, USA (NIH), Chercheur indépendant, Amazon Web Services Seattle (AWS), Università degli Studi di Milano-Bicocca = University of Milano-Bicocca (UNIMIB), University of Toronto, Masaryk University Brno (MUNI), Terry Fox Laboratory, BC Cancer Agency (BCCRC)-British Columbia Cancer Agency Research Centre, The University of Tennessee Knoxville, The Babraham Institute Cambridge, UK, Oregon Health and Science University Portland (OHSU), Human Predictions LLC, Illumina, Swiss-Prot Group, Swiss Institute of Bioinformatics Genève (SIB), Modelling and Analysis for Medical and Biological Applications (MAMBA), Inria de Paris, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Laboratoire Jacques-Louis Lions (LJLL (UMR_7598)), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), University of California San Diego (UC San Diego), University of California (UC), Center for Bioinformatics (ZBIT), Eberhard Karls Universität Tübingen = University of Tübingen, Uppsala University, Institut für Populationsgenetik Vienna, Veterinärmedizinische Universität Wien, Maastricht University Maastricht, Alpen-Adria-Universität Klagenfurt Klagenfurt, Austria, Medizinische Universität Wien = Medical University of Vienna, German Cancer Research Center - Deutsches Krebsforschungszentrum Heidelberg (DKFZ), Heidelberg Institute for Theoretical Studies (HITS), Russian-Armenian University (RAU), GlaxoSmithKline Stevenage, UK (GSK), GlaxoSmithKline Headquarters, London, UK (GSK), Microsoft Technology Licensing (MTL), Microsoft Corporation Redmond, Wash., Vanderbilt University School of Medicine Nashville, University of Washington Seattle, University of Rostock, Los Alamos National Laboratory (LANL), Lorentz Institute, Universiteit Leiden = Leiden University, Tegmine Therapeutics, Modeling, simulation, measurement, and control of bacterial regulatory networks (IBIS), Laboratoire Adaptation et pathogénie des micro-organismes Grenoble (LAPM), Université Joseph Fourier - Grenoble 1 (UJF)-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)-Centre National de la Recherche Scientifique (CNRS)-Inria Grenoble - Rhône-Alpes, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut Jean Roget, SRI International Menlo Park (SRI), Icahn School of Medicine at Mount Sinai New York (MSSM), University of Liverpool, Universitätsklinikum Tübingen - University Hospital of Tübingen, Institute of Information and Computational Technologies (IICT), Max Planck Institute for Dynamics of Complex Technical Systems, Max-Planck-Gesellschaft, Max-Planck-Institut für Molekulare Genetik (MPIMG), Friedrich-Schiller-Universität = Friedrich Schiller University Jena Jena, Germany, Humboldt-Universität zu Berlin = Humboldt University of Berlin = Université Humboldt de Berlin (HU Berlin), Newcastle University Newcastle, École polytechnique (X), Institut Polytechnique de Paris (IP Paris), Heinrich Heine Universität Düsseldorf = Heinrich Heine University Düsseldorf, The Systems Biology Institute Tokyo (SBI), Centro de Quimica Estrutural (CQE), Instituto Superior Técnico (IST / Técnico Lisboa), University of Southern California (USC), Instituto Gulbenkian de Ciência Oeiras (IGC), Fundação Calouste Gulbenkian, University of Southern Denmark (SDU), University of Auckland Auckland, University of Utah, Virginia Tech Blacksburg, Université du Luxembourg = University of Luxembourg = Universität Luxemburg (uni.lu), Integrative Bioinformatics Inc Mountain View, Cleveland Clinic, Stellenbosch University, Broad Institute of MIT and Harvard (BROAD INSTITUTE), Harvard Medical School Boston (HMS)-Massachusetts Institute of Technology (MIT)-Massachusetts General Hospital Boston, Universität Heidelberg Heidelberg = Heidelberg University, Leibniz Institute of Plant Genetics and Crop Plant Research Gatersleben (IPK-Gatersleben), Laboratoire de Biologie du Développement de Villefranche sur mer (LBDV), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut de la Mer de Villefranche (IMEV), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Mount Sinai School of Medicine, Department of Psychiatry-Icahn School of Medicine at Mount Sinai New York (MSSM), University of Manchester Manchester, Computational systems biology and optimization (Lifeware), Inria Saclay - Ile de France, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria), California Institute of Technology (CALTECH), Encodia Inc San Diego

المصدر: ISSN: 1744-4292.

مصطلحات موضوعية: Computational modeling, File format, Interoperability, Reproducibility, Systems biology, [SDV.BIO]Life Sciences [q-bio]/Biotechnology, [SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC]

الاتاحة: https://hal.inrae.fr/hal-02924909
https://hal.inrae.fr/hal-02924909v1/document
https://hal.inrae.fr/hal-02924909v1/file/Keating_2020_SBML%20Level%203.pdf
https://doi.org/10.15252/msb.20199110

المؤلفون: Lieven, Christian, Beber, Moritz E., Olivier, Brett G., Bergmann, Frank T., Ataman, Meric, Babaei, Parizad, Bartell, Jennifer A., Blank, Lars M., Chauhan, Siddharth, Correia, Kevin, Diener, Christian, Dräger, Andreas, Ebert, Birgitta E., Edirisinghe, Janaka N., Faria, José P., Feist, Adam M., Fengos, Georgios, Fleming, Ronan M.T., García-Jiménez, Beatriz, Hatzimanikatis, Vassily, van Helvoirt, Wout, Henry, Christopher S., Hermjakob, Henning, Herrgård, Markus J., Kaafarani, Ali, Kim, Hyun Uk, King, Zachary, Klamt, Steffen, Klipp, Edda, Koehorst, Jasper J., König, Matthias, Lakshmanan, Meiyappan, Lee, Dong Yup, Lee, Sang Yup, Lee, Sunjae, Lewis, Nathan E., Liu, Filipe, Ma, Hongwu, Machado, Daniel, Mahadevan, Radhakrishnan, Maia, Paulo, Mardinoglu, Adil, Medlock, Gregory L., Monk, Jonathan M., Nielsen, Jens, Nielsen, Lars Keld, Nogales, Juan, Nookaew, Intawat, Palsson, Bernhard O., Papin, Jason A., Patil, Kiran R., Poolman, Mark, Price, Nathan D., Resendis-Antonio, Osbaldo, Richelle, Anne, Rocha, Isabel, Sánchez, Benjamín J., Schaap, Peter J., Malik Sheriff, Rahuman S., Shoaie, Saeed, Sonnenschein, Nikolaus, Teusink, Bas, Vilaça, Paulo, Vik, Jon Olav, Wodke, Judith A.H., Xavier, Joana C., Yuan, Qianqian, Zakhartsev, Maksim, Zhang, Cheng

المصدر: Nature Biotechnology 38 (2020) 4 ; ISSN: 1087-0156

مصطلحات موضوعية: Life Science

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/524304

الاتاحة: https://research.wur.nl/en/publications/publisher-correction-memote-for-standardized-genome-scale-metabol
https://doi.org/10.1038/s41587-020-0477-4

المؤلفون: Glont, Mihai, Arankalle, Chinmay, Tiwari, Krishna, Nguyen, Tung V N, Hermjakob, Henning, Malik-Sheriff, Rahuman S

المساهمون: Robinson, Peter, Innovative Medicines Initiative 2 Joint Undertaking, European Union’s Horizon 2020 Research and Innovation Programme, European Federation of Pharmaceutical Industries and Associations, Biotechnology and Biological Sciences Research Council, European Molecular Biology Laboratory

المصدر: Bioinformatics ; volume 36, issue 17, page 4649-4654 ; ISSN 1367-4803 1367-4811

الاتاحة: http://dx.doi.org/10.1093/bioinformatics/btaa560
http://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaa560/33982957/btaa560.pdf
https://academic.oup.com/bioinformatics/article-pdf/36/17/4649/50677542/btaa560.pdf

المؤلفون: Raman, Karthik, Kratochvil, Miroslav, Olivier, Brett G., Konig, Matthias, Sengupta, Pratyay, Baskaran, Dinesh Kumar Kuppa, Nguyen, Tung V N, Lobo, Daniel, Wilken, St Elmo, Tiwari, Krishna Kumar, Raghu, Aswathy K., Palanikumar, Indumathi, Raajaraam, Lavanya, Ibrahim, Maziya, Balakrishnan, Sanjaay, Umale, Shreyansh, Bergmann, Frank, Malpani, Tanisha, Satagopam, Venkata P, Schneider, Reinhard, Beber, Moritz E., Keating, Sarah, Anton, Mihail, Renz, Alina, Lakshmanan, Meiyappan, Lee, Dong-Yup, Koduru, Lokan, Mostolizadeh, Reihaneh, Dias, Oscar, Cunha, Emanuel Rodrigues, Oliveira, Alexandre Rafael Machado, Lee, Yi Qing, Zengler, Karsten, Santibanez-Palominos, Rodrigo, Kumar, Manish, Barberis, Matteo, Puniya, Bhanwar Lal, Helikar, Tomas, Dinh, Hoang V., Suthers, Patrick F., Maranas, Costas D., Casini, Isabella, Loghmani, Seyed Babak, Veith, Nadine, Leonidou, Nantia, Li, Feiran, Chen, Yu, Nielsen, Jens, Lee, GaRyoung, Lee, Sang Mi, Kim, Gi Bae, Monteiro, Pedro T., Teixeira, Miguel C., Kim, Hyun Uk, Lee, Sang Yup, Liebal, Ulf W., Blank, Lars M., Lieven, Christian, Tarzi, Chaimaa, Angione, Claudio, Blaise, Manga Enuh, Aytar, Celik Pinar, Kulyashov, Mikhail, Akberdin, llya, Kim, Dohyeon, Yoon, Sung Ho, Xu, Zhaohui, Gautam, Jyotshana, Scott, William T., Schaap, Peter J., Koehorst, Jasper J., Zuniga, Cristal, Canto-Encalada, Gabriela, Benito-Vaquerizo, Sara, Olm, Ivette Parera, Suarez-Diez, Maria, Yuan, Qianqian, Ma, Hongwu, Islam, Mohammad Mazharul, Papin, Jason A., Zorrilla, Francisco, Patil, Kiran Raosaheb, Basile, Arianna, Nogales, Juan, San Leon, Granado, Castillo-Alfonso, Freddy, Olivares-Hernández, Roberto, Vigueras-Ramirez, Gabriel, Hermjakob, Henning, Drager, Andreas, Malik-Sheriff, Rahuman S

المساهمون: Universidade do Minho

وصف الملف: application/pdf

Relation: Raman, Karthik; Kratochvil, Miroslav; Olivier, Brett G.; Konig, Matthias; Sengupta, Pratyay; Baskaran, Dinesh Kumar Kuppa; Nguyen, Tung V N; Lobo, Daniel; Wilken, St Elmo; Tiwari, Krishna Kumar; Raghu, Aswathy K.; Palanikumar, Indumathi; Raajaraam, Lavanya; Ibrahim, Maziya; Balakrishnan, Sanjaay; Umale, Shreyansh; Bergmann, Frank; Malpani, Tanisha; Satagopam, Venkata P; Schneider, Reinhard; Beber, Moritz E.; Keating, Sarah; Anton, Mihail; Renz, Alina; Lakshmanan, Meiyappan; Lee, Dong-Yup; Koduru, Lokan; Mostolizadeh, Reihaneh; Dias, Oscar; Cunha, Emanuel; Oliveira, Alexandre; Lee, Yi Qing; Zengler, Karsten; Santibanez-Palominos, Rodrigo; Kumar, Manish; Barberis, Matteo; Puniya, Bhanwar Lal; Helikar, Tomas; Dinh, Hoang V.; Suthers, Patrick F.; Maranas, Costas D.; Casini, Isabella; Loghmani, Seyed Babak; Veith, Nadine; Leonidou, Nantia; Li, Feiran; Chen, Yu; Nielsen, Jens; Lee, GaRyoung; Lee, Sang Mi; Kim, Gi Bae; Monteiro, Pedro T.; Teixeira, Miguel C.; Kim, Hyun Uk; Lee, Sang Yup; Liebal, Ulf W.; Blank, Lars M.; Lieven, Christian; Tarzi, Chaimaa; Angione, Claudio; Blaise, Manga Enuh; Aytar, Celik Pinar; Kulyashov, Mikhail; Akberdin, llya; Kim, Dohyeon; Yoon, Sung Ho; Xu, Zhaohui; Gautam, Jyotshana; Scott, William T.; Schaap, Peter J.; Koehorst, Jasper J.; Zuniga, Cristal; Canto-Encalada, Gabriela; Benito-Vaquerizo, Sara; Olm, Ivette Parera; Suarez-Diez, Maria; Yuan, Qianqian; Ma, Hongwu; Islam, Mohammad Mazharul; Papin, Jason A.; Zorrilla, Francisco; Patil, Kiran Raosaheb; Basile, Arianna; Nogales, Juan; San Leon, Granado; Castillo-Alfonso, Freddy; Olivares-Hern; ez, Roberto; Vigueras-Ramirez, Gabriel; Hermjakob, Henning; Drager, Andreas; Malik-Sheriff, Rahuman S, FROG analysis ensures the reproducibility of genome scale metabolic models. bioRxiv - the Preprint Server for Biology. Cold Spring Harbor Laboratory, 2024.; https://www.biorxiv.org/

الاتاحة: https://hdl.handle.net/1822/93169

المؤلفون: Cucurull-Sanchez, Lourdes, Chappell, Michael J., Chelliah, Vijayalakshmi, Amy Cheung, S. Y., Derks, Gianne, Penney, Mark, Phipps, Alex, Malik-Sheriff, Rahuman S., Timmis, Jonathan, Tindall, Marcus J., van der Graaf, Piet H., Vicini, Paolo, Yates, James W. T.

مصطلحات موضوعية: Data Science, Biomedical Sciences, Pharmacy and Pharmacology

وصف الملف: application/pdf

Relation: http://sure.sunderland.ac.uk/id/eprint/11854/1/Best%20Practices%20to%20Maximize%20the%20Use%20and%20Reuse%20of%20Quantitative%20and%20Systems%20Pharmacology.pdf; Cucurull-Sanchez, Lourdes, Chappell, Michael J., Chelliah, Vijayalakshmi, Amy Cheung, S. Y., Derks, Gianne, Penney, Mark, Phipps, Alex, Malik-Sheriff, Rahuman S., Timmis, Jonathan, Tindall, Marcus J., van der Graaf, Piet H., Vicini, Paolo and Yates, James W. T. (2019) Best Practices to Maximize the Use and Reuse of Quantitative and Systems Pharmacology Models: Recommendations From the United Kingdom Quantitative and Systems Pharmacology Network. CPT: Pharmacometrics & Systems Pharmacology, 8 (5). pp. 259-272.

الاتاحة: http://sure.sunderland.ac.uk/id/eprint/11854/
http://sure.sunderland.ac.uk/id/eprint/11854/1/Best%20Practices%20to%20Maximize%20the%20Use%20and%20Reuse%20of%20Quantitative%20and%20Systems%20Pharmacology.pdf
https://ascpt.onlinelibrary.wiley.com/doi/full/10.1002/psp4.12381
https://doi.org/10.1002/psp4.12381

المؤلفون: Malik-Sheriff, Rahuman S, Glont, Mihai, Nguyen, Tung V N, Tiwari, Krishna, Roberts, Matthew G, Xavier, Ashley, Vu, Manh T, Men, Jinghao, Maire, Matthieu, Kananathan, Sarubini, Fairbanks, Emma L, Meyer, Johannes P, Arankalle, Chinmay, Varusai, Thawfeek M, Knight-Schrijver, Vincent, Li, Lu, Dueñas-Roca, Corina, Dass, Gaurhari, Keating, Sarah M, Park, Young M, Buso, Nicola, Rodriguez, Nicolas, Hucka, Michael, Hermjakob, Henning

المساهمون: Biotechnology and Biological Sciences Research Council, Innovative Medicines Initiative, European Molecular Biology Laboratory

المصدر: Nucleic Acids Research ; ISSN 0305-1048 1362-4962

الاتاحة: https://doi.org/10.1093/nar/gkz1055
http://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkz1055/30488340/gkz1055.pdf

المؤلفون: Queralt-Rosinach, Núria, Alshaikhdeeb, Basel, Bolzani, Luca, Shoaib, Muhammad, Barbero, Marcos Casado, Aguiló-Castillo, Sergi, Cirillo, Davide, Castro, Leyla Jael, Tsueng, Ginger, Kalaš, Matúš, Palmblad, Magnus, Welter, Danielle, Ghosh, Soumyabrata, Satagopam, Venkata, Malik Sheriff, Rahuman S.

الاتاحة: http://dx.doi.org/10.37044/osf.io/q4zgx

المؤلفون: Malik-Sheriff, Rahuman S., Imtiaz, Sarah, Grecco, Hernán E., Zamir, Eli

المصدر: Scientific Reports ; volume 8, issue 1 ; ISSN 2045-2322

الاتاحة: http://dx.doi.org/10.1038/s41598-018-20252-0
https://www.nature.com/articles/s41598-018-20252-0
https://www.nature.com/articles/s41598-018-20252-0.pdf

المؤلفون: Glont, Mihai, Nguyen, Tung V N, Graesslin, Martin, Hälke, Robert, Ali, Raza, Schramm, Jochen, Wimalaratne, Sarala M, Kothamachu, Varun B, Rodriguez, Nicolas, Swat, Maciej J, Eils, Jurgen, Eils, Roland, Laibe, Camille, Malik-Sheriff, Rahuman S, Chelliah, Vijayalakshmi, Le Novère, Nicolas, Hermjakob, Henning

المصدر: Nucleic Acids Research ; volume 46, issue D1, page D1248-D1253 ; ISSN 0305-1048 1362-4962

الاتاحة: http://dx.doi.org/10.1093/nar/gkx1023
http://academic.oup.com/nar/article-pdf/46/D1/D1248/23162033/gkx1023.pdf