المؤلفون: Olson, Robert D, Assaf, Rida, Brettin, Thomas, Conrad, Neal, Cucinell, Clark, Davis, James J, Dempsey, Donald M, Dickerman, Allan, Dietrich, Emily M, Kenyon, Ronald W, Kuscuoglu, Mehmet, Lefkowitz, Elliot J, Lu, Jian, Machi, Dustin, Macken, Catherine, Mao, Chunhong, Niewiadomska, Anna, Nguyen, Marcus, Olsen, Gary J, Overbeek, Jamie C, Parrello, Bruce, Parrello, Victoria, Porter, Jacob S, Pusch, Gordon D, Shukla, Maulik, Singh, Indresh, Stewart, Lucy, Tan, Gene, Thomas, Chris, VanOeffelen, Margo, Vonstein, Veronika, Wallace, Zachary S, Warren, Andrew S, Wattam, Alice R, Xia, Fangfang, Yoo, Hyunseung, Zhang, Yun, Zmasek, Christian M, Scheuermann, Richard H, Stevens, Rick L

المصدر: Nucleic Acids Research. 51(D1)

مصطلحات موضوعية: Influenza, Pneumonia & Influenza, Prevention, Infectious Diseases, Infection, Good Health and Well Being, Humans, Bacteria, Computational Biology, Databases, Genetic, Genomics, Influenza, Human, Viruses, Software, Environmental Sciences, Biological Sciences, Information and Computing Sciences, Developmental Biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/0tp0p6vj

المؤلفون: Chen, Jiangzhuo, Hoops, Stefan, Mortveit, Henning S, Lewis, Bryan L, Machi, Dustin, Bhattacharya, Parantapa, Venkatramanan, Srinivasan, Wilson, Mandy L, Barrett, Chris L, Marathe, Madhav V

المساهمون: Amon, Cristina, National Institutes of Health, 1, NSF, Centers for Disease Control and Prevention, DTRA

المصدر: PNAS Nexus ; volume 4, issue 1 ; ISSN 2752-6542

الاتاحة: https://doi.org/10.1093/pnasnexus/pgae557
https://academic.oup.com/pnasnexus/advance-article-pdf/doi/10.1093/pnasnexus/pgae557/61193734/pgae557.pdf
https://academic.oup.com/pnasnexus/article-pdf/4/1/pgae557/61193734/pgae557.pdf

المؤلفون: Jung, Sung-mok, Loo, Sara L., Howerton, Emily, Contamin, Lucie, Smith, Claire P., Carcelén, Erica C., Yan, Katie, Bents, Samantha J., Levander, John, Espino, Jessi, Lemaitre, Joseph C., Sato, Koji, McKee, Clifton D., Hill, Alison L., Chinazzi, Matteo, Davis, Jessica T., Mu, Kunpeng, Vespignani, Alessandro, Rosenstrom, Erik T., Rodriguez-Cartes, Sebastian A., Ivy, Julie S., Mayorga, Maria E., Swann, Julie L., España, Guido, Cavany, Sean, Moore, Sean M., Perkins, T. Alex, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Srivastava, Ajitesh, Aawar, Majd Al, Bi, Kaiming, Bandekar, Shraddha Ramdas, Bouchnita, Anass, Fox, Spencer J., Meyers, Lauren Ancel, Porebski, Przemyslaw, Venkatramanan, Srini, Adiga, Aniruddha, Hurt, Benjamin, Klahn, Brian, Outten, Joseph, Chen, Jiangzhuo, Mortveit, Henning, Wilson, Amanda, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin

المساهمون: MacPherson, Peter, Centers for Disease Control and Prevention, National Science Foundation, U.S. Department of Health and Human Services, U.S. Department of Homeland Security, California Department of Public Health, Johns Hopkins University, Amazon Web Services, Foundation for the National Institutes of Health, Swiss National Science Foundation, National Institute of General Medical Sciences, Pennsylvania State University, Council of State and Territorial Epidemiologists, Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases, Scenario Modeling Hub Consortium fellowship, Scenario Modeling Consortium, Virginia Department of Health, Defense Threat Reduction Agency, University of Virginia

المصدر: PLOS Medicine ; volume 21, issue 4, page e1004387 ; ISSN 1549-1676

الاتاحة: http://dx.doi.org/10.1371/journal.pmed.1004387
https://dx.plos.org/10.1371/journal.pmed.1004387

المؤلفون: Olson, Robert D, Assaf, Rida, Brettin, Thomas, Conrad, Neal, Cucinell, Clark, Davis, James J, Dempsey, Donald M, Dickerman, Allan, Dietrich, Emily M, Kenyon, Ronald W, Kuscuoglu, Mehmet, Lefkowitz, Elliot J, Lu, Jian, Machi, Dustin, Macken, Catherine, Mao, Chunhong, Niewiadomska, Anna, Nguyen, Marcus, Olsen, Gary J, Overbeek, Jamie C, Parrello, Bruce, Parrello, Victoria, Porter, Jacob S, Pusch, Gordon D, Shukla, Maulik, Singh, Indresh, Stewart, Lucy, Tan, Gene, Thomas, Chris, VanOeffelen, Margo, Vonstein, Veronika, Wallace, Zachary S, Warren, Andrew S, Wattam, Alice R, Xia, Fangfang, Yoo, Hyunseung, Zhang, Yun, Zmasek, Christian M, Scheuermann, Richard H, Stevens, Rick L

المصدر: Nucleic Acids Research, vol 51, iss D1

مصطلحات موضوعية: Influenza, Pneumonia & Influenza, Prevention, Infectious Diseases, Infection, Good Health and Well Being, Humans, Bacteria, Computational Biology, Databases, Genetic, Genomics, Human, Viruses, Software, Environmental Sciences, Biological Sciences, Information and Computing Sciences, Developmental Biology

جغرافية الموضوع: d678 - d689

وصف الملف: application/pdf

Relation: qt0tp0p6vj; https://escholarship.org/uc/item/0tp0p6vj

الاتاحة: https://escholarship.org/uc/item/0tp0p6vj

المؤلفون: Borchering, Rebecca K., Mullany, Luke C., Howerton, Emily, Chinazzi, Matteo, Smith, Claire P., Qin, Michelle, Reich, Nicholas G., Contamin, Lucie, Levander, John, Kerr, Jessica, Espino, J., Hochheiser, Harry, Lovett, Kaitlin, Kinsey, Matt, Tallaksen, Kate, Wilson, Shelby, Shin, Lauren, Lemaitre, Joseph C., Hulse, Juan Dent, Kaminsky, Joshua, Lee, Elizabeth C., Hill, Alison L., Davis, Jessica T., Mu, Kunpeng, Xiong, Xinyue, Pastore y Piontti, Ana, Vespignani, Alessandro, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srini, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Hurt, Benjamin, Chen, Jiangzhuo, Mortveit, Henning, Wilson, Amanda, Marathe, Madhav, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude, Galanti, Marta, Yamana, Teresa, Pei, Sen, Shaman, Jeffrey

المصدر: The Lancet Regional Health - Americas ; volume 17, page 100398 ; ISSN 2667-193X

الاتاحة: http://dx.doi.org/10.1016/j.lana.2022.100398
https://api.elsevier.com/content/article/PII:S2667193X22002150?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2667193X22002150?httpAccept=text/plain

المؤلفون: Marathe, Madhav V., Kuhlman, Chris, Machi, Dustin, Ravi, S. S.

Relation: https://zenodo.org/communities/cssi2022; https://doi.org/10.5281/zenodo.6857012; https://doi.org/10.5281/zenodo.6857013; oai:zenodo.org:6857013

الاتاحة: https://doi.org/10.5281/zenodo.6857013

المؤلفون: Truelove, Shaun, Smith, Claire P, Qin, Michelle, Mullany, Luke C, Borchering, Rebecca K, Lessler, Justin, Shea, Katriona, Howerton, Emily, Contamin, Lucie, Levander, John, Kerr, Jessica, Hochheiser, Harry, Kinsey, Matt, Tallaksen, Kate, Wilson, Shelby, Shin, Lauren, Rainwater-Lovett, Kaitlin, Lemairtre, Joseph C, Dent, Juan, Kaminsky, Joshua, Lee, Elizabeth C, Perez-Saez, Javier, Hill, Alison, Karlen, Dean, Chinazzi, Matteo, Davis, Jessica T, Mu, Kunpeng, Xiong, Xinyue, Pastore y Piontti, Ana, Vespignani, Alessandro, Srivastava, Ajitesh, Porebski, Przemyslaw, Venkatramanan, Srinivasan, Adiga, Aniruddha, Lewis, Bryan, Klahn, Brian, Outten, Joseph, Orr, Mark, Harrison, Galen, Hurt, Benjamin, Chen, Jiangzhuo, Vullikanti, Anil, Marathe, Madhav, Hoops, Stefan, Bhattacharya, Parantapa, Machi, Dustin, Chen, Shi, Paul, Rajib, Janies, Daniel, Thill, Jean-Claude

المساهمون: National Science Foundation, Huck Institutes of the Life Sciences, National Institute of General Medical Sciences, United States Department of Health and Human Services, California Department of Public Health, Johns Hopkins University, National Institutes of Health, Swiss National Science Foundation, Virginia Department of Health, Centers for Disease Control and Prevention, Defense Threat Reduction Agency, University of Virginia, COVID-19 HPC Consortium, Amazon Web Services, Models of Infectious Disease Agent Study, North Carolina Biotechnology Center, Council of State and Territorial Epidemiologists, Morris-Singer Foundation

المصدر: eLife ; volume 11 ; ISSN 2050-084X

الاتاحة: http://dx.doi.org/10.7554/elife.73584
https://cdn.elifesciences.org/articles/73584/elife-73584-v2.pdf
https://cdn.elifesciences.org/articles/73584/elife-73584-v2.xml
https://elifesciences.org/articles/73584

المؤلفون: Thakur, Mugdha, Zhou, Richard, Mohan, Mukundan, Marathe, Achla, Chen, Jiangzhuo, Hoops, Stefan, Machi, Dustin, Lewis, Bryan, Vullikanti, Anil

المصدر: BMC Infectious Diseases ; volume 22, issue 1 ; ISSN 1471-2334

الاتاحة: http://dx.doi.org/10.1186/s12879-022-07703-w
https://link.springer.com/content/pdf/10.1186/s12879-022-07703-w.pdf
https://link.springer.com/article/10.1186/s12879-022-07703-w/fulltext.html

المؤلفون: Olson, Robert D, Assaf, Rida, Brettin, Thomas, Conrad, Neal, Cucinell, Clark, Davis, James J, Dempsey, Donald M, Dickerman, Allan, Dietrich, Emily M, Kenyon, Ronald W, Kuscuoglu, Mehmet, Lefkowitz, Elliot J, Lu, Jian, Machi, Dustin, Macken, Catherine, Mao, Chunhong, Niewiadomska, Anna, Nguyen, Marcus, Olsen, Gary J, Overbeek, Jamie C, Parrello, Bruce, Parrello, Victoria, Porter, Jacob S, Pusch, Gordon D, Shukla, Maulik, Singh, Indresh, Stewart, Lucy, Tan, Gene, Thomas, Chris, VanOeffelen, Margo, Vonstein, Veronika, Wallace, Zachary S, Warren, Andrew S, Wattam, Alice R, Xia, Fangfang, Yoo, Hyunseung, Zhang, Yun, Zmasek, Christian M, Scheuermann, Richard H, Stevens, Rick L

المساهمون: National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services

المصدر: Nucleic Acids Research ; volume 51, issue D1, page D678-D689 ; ISSN 0305-1048 1362-4962

الاتاحة: https://doi.org/10.1093/nar/gkac1003
https://academic.oup.com/nar/article-pdf/51/D1/D678/48441350/gkac1003.pdf

المؤلفون: Warren, Andrew S, Aurrecoechea, Cristina, Brunk, Brian, Desai, Prerak, Emrich, Scott, Giraldo-Calderón, Gloria I, Harb, Omar, Hix, Deborah, Lawson, Daniel, Machi, Dustin, Mao, Chunhong, McClelland, Michael, Nordberg, Eric, Shukla, Maulik, Vosshall, Leslie B, Wattam, Alice R, Will, Rebecca, Yoo, Hyun Seung, Sobral, Bruno

المصدر: Bioinformatics. 31(9)

مصطلحات موضوعية: Genetics, Biotechnology, Human Genome, Good Health and Well Being, Animals, Bacteria, Disease Vectors, Gene Expression Profiling, Genomics, High-Throughput Screening Assays, Parasites, Sequence Analysis, RNA, Software, Mathematical Sciences, Biological Sciences, Information and Computing Sciences, Bioinformatics

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/6bc840tg

المؤلفون: Machi, Dustin, Bhattacharya, Parantapa, Hoops, Stefan, Chen, Jiangzhuo, Mortveit, Henning, Venkatramanan, Srinivasan, Lewis, Bryan, Wilson, Mandy, Fadikar, Arindam, Maiden, Tom, Barrett, Christopher L., Marathe, Madhav V.

المساهمون: National Institutes of Health, Centers for Disease Control and Prevention, University of Virginia, Google, Defense Threat Reduction Agency

المصدر: 2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS)

الاتاحة: http://dx.doi.org/10.1109/ipdps49936.2021.00072
http://xplorestaging.ieee.org/ielx7/9458946/9458962/09460555.pdf?arnumber=9460555

المؤلفون: Warren, Andrew, Aurrecoechea, Cristina, Brunk, Brian, Desai, Prerak, Emrich, Scott, Giraldo-Calderón, Gloria, Harb, Omar, Hix, Deborah, Lawson, Daniel, Machi, Dustin, Mao, Chunhong, McClelland, Michael, Nordberg, Eric, Shukla, Maulik, Vosshall, Leslie, Wattam, Alice, Will, Rebecca, Yoo, Hyun Seung, Sobral, Bruno

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/7xf5r64p

المؤلفون: Warren, Andrew S, Aurrecoechea, Cristina, Brunk, Brian, Desai, Prerak, Emrich, Scott, Giraldo-Calderón, Gloria I, Harb, Omar, Hix, Deborah, Lawson, Daniel, Machi, Dustin, Mao, Chunhong, McClelland, Michael, Nordberg, Eric, Shukla, Maulik, Vosshall, Leslie B, Wattam, Alice R, Will, Rebecca, Yoo, Hyun Seung, Sobral, Bruno

مصطلحات موضوعية: Biological Sciences, Bioinformatics and Computational Biology, Genetics, Networking and Information Technology R&D (NITRD), Biotechnology, Human Genome, Generic health relevance, Good Health and Well Being

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/7xf5r64p

المؤلفون: Bhattacharya, Parantapa, Machi, Dustin, Chen, Jiangzhuo, Hoops, Stefan, Lewis, Bryan, Mortveit, Henning, Venkatramanan, Srinivasan, Wilson, Mandy L., Marathe, Achla, Porebski, Przemyslaw, Klahn, Brian, Outten, Joseph, Vullikanti, Anil, Xie, Dawen, Adiga, Abhijin, Brown, Shawn, Barrett, Christopher, Marathe, Madhav

المساهمون: University of Virginia, Centre Informatique National de l’Enseignement Supérieur, National Institutes of Health, Virginia Department of Health, National Science Foundation, Centers for Disease Control and Prevention, Defense Threat Reduction Agency

المصدر: Journal of Parallel and Distributed Computing ; page 104899 ; ISSN 0743-7315

الاتاحة: http://dx.doi.org/10.1016/j.jpdc.2024.104899
https://api.elsevier.com/content/article/PII:S0743731524000637?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0743731524000637?httpAccept=text/plain

المؤلفون: VanOeffelen, Margo, Nguyen, Marcus, Aytan-Aktug, Derya, Brettin, Thomas, Dietrich, Emily M, Kenyon, Ronald W, Machi, Dustin, Mao, Chunhong, Olson, Robert, Pusch, Gordon D, Shukla, Maulik, Stevens, Rick, Vonstein, Veronika, Warren, Andrew S, Wattam, Alice R, Yoo, Hyunseung, Davis, James J

المساهمون: National Institutes of Health

المصدر: Briefings in Bioinformatics ; volume 22, issue 6 ; ISSN 1467-5463 1477-4054

الاتاحة: http://dx.doi.org/10.1093/bib/bbab313
https://academic.oup.com/bib/article-pdf/22/6/bbab313/41090064/bbab313.pdf

المؤلفون: Davis, James J., Wattam, Alice R., Aziz, Ramy K., Brettin, Thomas, Butler, Ralph, Butler, Rory M., Chlenski, Philippe, Conrad, Neal, Dickerman, Allan W., Dietrich, Emily M., Gabbard, Joseph L., Gerdes, Svetlana, Guard, Andrew, Kenyon, Ronald W., Machi, Dustin, Mao, Chunhong, Murphy-Olson, Daniel E., Nguyen, Marcus, Nordberg, Eric K., Olsen, Gary J., Olson, Robert D., Overbeek, Jamie C., Overbeek, Ross, Parrello, Bruce, Pusch, Gordon D., Shukla, Maulik, Thomas, Chris, VanOeffelen, Margo, Vonstein, Veronika, Warren, Andrew S., Xia, Fangfang, Xie, Dawen, Yoo, Hyunseung, Stevens, Rick L.

المساهمون: Industrial and Systems Engineering

وصف الملف: application/pdf

Relation: http://hdl.handle.net/10919/98561; https://doi.org/10.1093/nar/gkz943; 48; D1

الاتاحة: http://hdl.handle.net/10919/98561
https://doi.org/10.1093/nar/gkz943

المؤلفون: Cedeno-Mieles, Vanessa, Hu, Zhihao, Ren, Yihui, Deng, Xinwei, Contractor, Noshir, Ekanayake, Saliya, Epstein, Joshua M., Goode, Brian J., Korkmaz, Gizem, Kuhlman, Christopher J., Machi, Dustin, Macy, Michael, Marathe, Madhav V., Ramakrishnan, Naren, Saraf, Parang, Self, Nathan

مصطلحات موضوعية: WORKFLOW MANAGEMENT, COLLECTIVE IDENTITY, INITIAL CONFIDENCE, ONLINE, ATTRIBUTION, DESIGN, RESPONSIBILITY, FAILURE, VALENCE, SUCCESS, Humans, Social Behavior, Social Sciences, Algorithms, Models, Theoretical, Software, Electronic Data Processing

وصف الملف: 58 page(s); application/pdf

Relation: http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000595863100009&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=930d57c9ac61a043676db62af60056c1; ARTN e0242453 (Article number); PONE-D-20-13649 (PII); http://hdl.handle.net/10919/105155; https://doi.org/10.1371/journal.pone.0242453; 15; 11; Deng, Xinwei [0000-0002-1560-2405]

الاتاحة: http://hdl.handle.net/10919/105155
https://doi.org/10.1371/journal.pone.0242453

المؤلفون: Kishore, Aparna, Machi, Lucas, Kuhlman, Chris J., Machi, Dustin, Ravi, S. S.

المصدر: Complex Networks & Their Applications X ; Studies in Computational Intelligence ; page 241-252 ; ISSN 1860-949X 1860-9503 ; ISBN 9783030934125 9783030934132

الاتاحة: http://dx.doi.org/10.1007/978-3-030-93413-2_21
https://link.springer.com/content/pdf/10.1007/978-3-030-93413-2_21

المؤلفون: Ferdousi, Tanvir, Kishore, Aparna, Machi, Lucas, Machi, Dustin, Kuhlman, Chris, Ravi, S. S.

مصطلحات موضوعية: paper-presentation

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::12a850d381d1a221ccc1f36cb225130f

المؤلفون: Wattam, Alice R., Davis, James J., Assaf, Rida, Boisvert, Sebastien, Brettin, Thomas, Bun, Christopher, Conrad, Neal, Dietrich, Emily M., Disz, Terry L., Gabbard, Joseph L., Gerdes, Svetlana, Henry, Christopher S., Kenyon, Ronald W., Machi, Dustin, Mao, Chunhong, Nordberg, Eric K., Olsen, Gary J., Murphy-Olson, Daniel E., Olson, Robert D., Overbeek, Ross, Parrello, Bruce, Pusch, Gordon D., Shukla, Maulik, Vonstein, Veronika, Warren, Andrew S., Xia, Fangfang, Yoo, Hyunseung, Stevens, Rick L.

المساهمون: Fralin Life Sciences Institute, Industrial and Systems Engineering

مصطلحات موضوعية: read alignment, genome, annotation, rast, assemblies, algorithm, archive, velvet, gene

وصف الملف: application/pdf

Relation: http://hdl.handle.net/10919/88888; https://doi.org/10.1093/nar/gkw1017; 45; D1

الاتاحة: http://hdl.handle.net/10919/88888
https://doi.org/10.1093/nar/gkw1017