المؤلفون: da Fonseca, Rute R., Campos, Paula F., Rey-Iglesia, Alba, Barroso, Gustavo V., Bergeron, Lucie A., Nande, Manuel, Tuya, Fernando, Abidli, Sami, Pérez, Montse, Riveiro, Isabel, Carrera, Pablo, Jurado-Ruzafa, Alba, Santamaría, M. Teresa G., Faria, Rui, Machado, André M., Fonseca, Miguel M., Froufe, Elsa, Castro, L. Filipe C.

المصدر: da Fonseca , R R , Campos , P F , Rey-Iglesia , A , Barroso , G V , Bergeron , L A , Nande , M , Tuya , F , Abidli , S , Pérez , M , Riveiro , I , Carrera , P , Jurado-Ruzafa , A , Santamaría , M T G , Faria , R , Machado , A M , Fonseca , M M , Froufe , E & Castro , L F C 2024 , ' Population Genomics Reveals the Underlying Structure of the Small Pelagic European Sardine and Suggests ....

مصطلحات موضوعية: Humans, Animals, Metagenomics, Fishes/genetics, Portugal, Genome/genetics, Spain

وصف الملف: application/pdf

الاتاحة: https://researchprofiles.ku.dk/da/publications/population-genomics-reveals-the-underlying-structure-of-the-small-pelagic-european-sardine-and-suggests-low-connectivity-within-macaronesia(fb3adea8-41c0-4591-90c0-decf999854ad).html
https://doi.org/10.3390/genes15020170
https://curis.ku.dk/ws/files/384561949/genes_15_00170_v3.pdf

المؤلفون: da Fonseca, Rute R, Couto, Alvarina, Machado, Andre M, Brejova, Brona, Albertin, Carolin B, Silva, Filipe, Gardner, Paul, Baril, Tobias, Hayward, Alex, Campos, Alexandre, Ribeiro, Ângela M, Barrio-Hernandez, Inigo, Hoving, Henk-Jan, Tafur-Jimenez, Ricardo, Chu, Chong, Frazão, Barbara, Petersen, Bent, Peñaloza, Fernando, Musacchia, Francesco, Alexander, Graham C, Osório, Hugo, Winkelmann, Inger, Simakov, Oleg, Rasmussen, Simon, Rahman, M Ziaur, Pisani, Davide, Vinther, Jakob, Jarvis, Erich, Zhang, Guojie, Strugnell, Jan M, Castro, L Filipe C, Fedrigo, Olivier, Patricio, Mateus, Li, Qiye, Rocha, Sara, Antunes, Agostinho, Wu, Yufeng, Ma, Bin, Sanges, Remo, Vinar, Tomas, Blagoev, Blagoy, Sicheritz-Ponten, Thomas, Nielsen, Rasmus, Gilbert, M Thomas P

المصدر: GigaScience. 9(1)

مصطلحات موضوعية: Microbiology, Biological Sciences, Bioinformatics and Computational Biology, Genetics, Human Genome, Biotechnology, Life Below Water, Animals, Biological Evolution, Chromatography, Liquid, Computational Biology, DNA Transposable Elements, Decapodiformes, Gene Expression Profiling, Genome, Genomics, Molecular Sequence Annotation, Multigene Family, RNA, Untranslated, Tandem Mass Spectrometry, Transcriptome, Whole Genome Sequencing, cephalopod, invertebrate, genome assembly

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/8c18h3gf
https://escholarship.org/content/qt8c18h3gf/qt8c18h3gf.pdf

المؤلفون: Gomes-dos-Santos, André, Lopes-Lima, Manuel, Machado, André M., Forest, Thomas, Achaz, Guillaume, Teixeira, Amílcar, Prié, Vincent, Castro, L. Filipe C., Froufe, Elsa

مصطلحات موضوعية: Genetics and genomics, Animal genetics, Freshwater science

Relation: info:eu-repo/grantAgreement/FCT/POR_NORTE/SFRH%2FBD%2F137935%2F2018/PT; info:eu-repo/grantAgreement/FCT/POR_NORTE/COVID%2FBD%2F152933%2F2022/PT; info:eu-repo/grantAgreement/FCT/CEEC IND 3ed/2020.03608.CEECIND%2FCP1601%2FCP1649%2FCT0005/PT; info:eu-repo/grantAgreement/FCT/CEEC INST 2ed/CEECINST%2F00027%2F2021%2FCP2789%2FCT0001/PT; info:eu-repo/grantAgreement/FCT/Concurso para Financiamento de Projetos de Investigação Científica e Desenvolvimento Tecnológico em Todos os Domínios Científicos - 2020/PTDC%2FCTA-AMB%2F3065%2F2020/PT; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F04423%2F2020/PT; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDP%2F04423%2F2020/PT; Gomes-dos-Santos, André; Lopes-Lima, Manuel; Machado, André M.; Forest, Thomas; Achaz, Guillaume; Teixeira, Amílcar; Prié, Vincent; Castro, L. Filipe C.; Froufe, Elsa (2023). The crown pearl V2: an improved genome assembly of the European freshwater pearl mussel Margaritifera margaritifera (Linnaeus, 1758). Gigabyte. ISSN 2709-4715. p. 1-14; http://hdl.handle.net/10198/29419

الاتاحة: http://hdl.handle.net/10198/29419
https://doi.org/10.46471/gigabyte.81

المؤلفون: Gomes-Dos-Santos, André, Vilas Arrondo, Nair, Machado, André M., Román-Marcote, Esther, Río-Iglesias, José Luis del, Baldó, Francisco, Pérez Rodríguez, Montse, Fonseca, Miguel M., Castro, L Filipe C, Froufe, Elsa

المساهمون: European Commission, Fundação para a Ciência e a Tecnologia (Portugal), European Maritime and Fisheries Fund

مصطلحات موضوعية: deep-sea fish, mitochondrial gene order, mitogenome, rearrangements, strand asymmetry

Relation: Open biology; Publisher's version; https://doi.org/10.1098/rsob.230181; Sí; Open Biology 13(12) : 230181 (2023); http://hdl.handle.net/10261/348606; http://dx.doi.org/10.13039/501100000780; http://dx.doi.org/10.13039/501100001871; 2-s2.0-85180784601; https://api.elsevier.com/content/abstract/scopus_id/85180784601

الاتاحة: http://hdl.handle.net/10261/348606
https://doi.org/10.1098/rsob.230181
https://doi.org/10.13039/501100000780
https://doi.org/10.13039/501100001871
https://api.elsevier.com/content/abstract/scopus_id/85180784601

المؤلفون: Gomes‐dos‐Santos, André, Froufe, Elsa, Pfeiffer, John M., Johnson, Nathan A., Smith, Chase H., Machado, André M., C. Castro, L. Filipe, Do, Van Tu, Hattori, Akimasa, Garrison, Nicole, Whelan, Nathan V., Bolotov, Ivan N., Vikhrev, Ilya V., Kondakov, Alexander V., Ghamizi, Mohamed, Prié, Vincent, Bogan, Arthur E., Lopes Lima, Manuel

المساهمون: Fundação para a Ciência e a Tecnologia, Ministry of Science and Higher Education of the Russian Federation

المصدر: Molecular Ecology Resources ; volume 23, issue 6, page 1403-1422 ; ISSN 1755-098X 1755-0998

الاتاحة: http://dx.doi.org/10.1111/1755-0998.13802
https://onlinelibrary.wiley.com/doi/pdf/10.1111/1755-0998.13802

المؤلفون: Gomes-dos-Santos, André, Froufe, Elsa, Machado, André M, Lajtner, Jasna, Černecký, Ján, C. Castro, L Filipe, Lopes Lima, Manuel

المساهمون: Katz, Laura

المصدر: Genome Biology and Evolution ; volume 15, issue 7 ; ISSN 1759-6653

الاتاحة: http://dx.doi.org/10.1093/gbe/evad116
https://academic.oup.com/gbe/advance-article-pdf/doi/10.1093/gbe/evad116/50665836/evad116.pdf
https://academic.oup.com/gbe/article-pdf/15/7/evad116/50841169/evad116.pdf

المؤلفون: Neves, Fabiana, Muñoz-Mérida, Antonio, Machado, André M., Almeida, Tereza, Gaigher, Arnaud, Esteves, Pedro J., Castro, L. Filipe C., Veríssimo, Ana

المصدر: Frontiers in Immunology ; volume 14 ; ISSN 1664-3224

الاتاحة: http://dx.doi.org/10.3389/fimmu.2023.1216338
https://www.frontiersin.org/articles/10.3389/fimmu.2023.1216338/full

المؤلفون: Gomes-dos-Santos, André, Machado, André M., Castro, L. Filipe C., Prié, Vincent, Teixeira, Amílcar, Lopes-Lima, Manuel, Froufe, Elsa

مصطلحات موضوعية: Animals, Bivalvia, Fresh water, Genomics, Gills, Transcriptome

Relation: info:eu-repo/grantAgreement/FCT/POR_NORTE/SFRH%2FBD%2F137935%2F2018/PT; info:eu-repo/grantAgreement/FCT/CEEC IND 2017/CEECIND%2F00627%2F2017%2FCP1420%2FCT0002/PT; info:eu-repo/grantAgreement/FCT/3599-PPCDT/PTDC%2FCTA-AMB%2F3065%2F2020/PT; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F04423%2F2020/PT; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDP%2F04423%2F2020/PT; Gomes-dos-Santos, André; Machado, André M.; Castro, L. Filipe C.; Prié, Vincent; Teixeira, Amílcar; Lopes-Lima, Manuel; Froufe, Elsa (2022). The gill transcriptome of threatened European freshwater mussels. Scientific Data. eISSN 2052-4463. 9:1, p. 1-10; http://hdl.handle.net/10198/27017

الاتاحة: http://hdl.handle.net/10198/27017
https://doi.org/10.1038/s41597-022-01613-x

المؤلفون: Vilas-Arrondo, N. (Nair), Gomes-dos-Santos, André, Pérez, M. (Montse), Baldó, F. (Francisco), Veríssimo, Ana, Catarino, Diana, Machado, André M., Román-Marcote, E. (Esther), Bañón, Rafael, Froufe, Elsa, Castro, L. Filipe C.

مصطلحات موضوعية: fish, opal, cartilage, distribution records, graphs

Relation: http://hdl.handle.net/10508/16187; Mitochondrial DNA B Resour, 7(3). 2022: 434-437; https://doi.org/10.1080/23802359.2022.2044403

الاتاحة: http://hdl.handle.net/10508/16187
https://doi.org/10.1080/23802359.2022.2044403

المؤلفون: Samico, Rodrigo, Machado, André M., Domingues, Marcos, Hagemann, Andreas, Valente, Luisa M. P., Malzahn, Arne M., Gomes-dos-Santos, André, Ruivo, Raquel, Monroig, Óscar, Castro, L. Filipe C.

المساهمون: Fundação para a Ciência e a Tecnologia (Portugal), Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Norwegian Research Council

مصطلحات موضوعية: Transcriptome, Ecology, Ragworm, Annelida

وصف الملف: application/pdf

Relation: #PLACEHOLDER_PARENT_METADATA_VALUE#; info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PCI2020-111960/ES/CONVERSION DE DESECHOS DE ACUICULTURA Y AGRICULTURA EN INGREDIENTES PARA PIENSOS DE LA INDUSTRIA ACUICOLA MEDIANTE EL CULTIVO DE ORGANISMOS DE BAJO NIVEL TROFICO/; Preprint; https://doi.org/10.1101/2022.07.20.500767; Sí; Samico, Rodrigo; Machado, André M.; Domingues, Marcos; Hagemann, Andreas; Valente, Luisa M. P.; Malzahn, Arne M.; Gomes-dos-Santos, André; Ruivo, Raquel; Monroig, Óscar; Castro, L. Filipe C.; 2022; A de novo transcriptome assembly of the annelid worm Hediste diversicolor [Preprint]; BioRxiv; https://doi.org/10.1101/2022.07.20.500767; http://hdl.handle.net/10261/305077

الاتاحة: http://hdl.handle.net/10261/305077
https://doi.org/10.1101/2022.07.20.500767

المؤلفون: Neves, Fabiana, Muñoz-Mérida, Antonio, Machado, André M., Almeida, Tereza, Gaigher, Arnaud, Esteves, Pedro J., Castro, L. Filipe C., Veríssimo, Ana

المساهمون: Fundação para a Ciência e a Tecnologia, European Regional Development Fund

المصدر: Frontiers in Immunology ; volume 13 ; ISSN 1664-3224

الاتاحة: http://dx.doi.org/10.3389/fimmu.2022.1020601
https://www.frontiersin.org/articles/10.3389/fimmu.2022.1020601/full

المؤلفون: Ferraz, Renato B., Paixão, Rômulo V., Lopes-Marques, Mónica, Machado, André M., Salaro, Ana L., Castro, L. Filipe C., Monroig, Óscar, O'Sullivan, Fernanda L.A.

المساهمون: CNPq, CAPES

المصدر: Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology ; volume 261, page 110749 ; ISSN 1096-4959

الاتاحة: http://dx.doi.org/10.1016/j.cbpb.2022.110749
https://api.elsevier.com/content/article/PII:S1096495922000379?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1096495922000379?httpAccept=text/plain

المؤلفون: Machado, André M., Fernández-Boo, Sergio, Nande, Manuel, Pinto, Rui, Costas, Benjamin, Castro, L. Filipe C.

المساهمون: Programa Operacional Temático Factores de Competitividade, European Commission, Fundação para a Ciência e a Tecnologia, European Regional Development Fund

المصدر: Aquaculture Reports ; volume 22, page 100936 ; ISSN 2352-5134

الاتاحة: http://dx.doi.org/10.1016/j.aqrep.2021.100936
https://api.elsevier.com/content/article/PII:S2352513421003537?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2352513421003537?httpAccept=text/plain

المؤلفون: Alves, Luís Q, Ruivo, Raquel, Valente, Raul, Fonseca, Miguel M, Machado, André M, Plön, Stephanie, Monteiro, Nuno, García-Parraga, David, Ruiz-Díaz, Sara, Sánchez-Calabuig, Maria J, Gutiérrez-Adán, Alfonso, Castro, L Filipe C

المساهمون: European Commission, Ministerio de Ciencia e Innovación (España), Comunidad de Madrid, Alves, Luís Q, Ruivo, Raquel, Valente, Raul, Fonseca, Miguel M, Machado, André M, Plön, Stephanie, Monteiro, Nuno, Ruiz-Díaz, Sara, Sánchez-Calabuig, Maria J, Gutiérrez-Adán, Alfonso, Castro, L Filipe C

مصطلحات موضوعية: Adenosine Triphosphate, Animals, Male, Sperm Motility, Spermatozoa, Whales

Relation: #PLACEHOLDER_PARENT_METADATA_VALUE#; info:eu-repo/grantAgreement/EC/H2020//031342; info:eu-repo/grantAgreement/MICINN//CTA-AMB/31342/2017; info:eu-repo/grantAgreement/MICINN//RTI2018-093548-BI00; IND2018/BIO-9610; Current biology : CB; Publisher's version; https://doi.org/10.1016/j.cub.2021.05.062; Sí; Current Biology 31(16): 3648-3655 (2021); http://hdl.handle.net/10261/282686; http://dx.doi.org/10.13039/100012818; http://dx.doi.org/10.13039/501100004837; http://dx.doi.org/10.13039/501100000780; 2-s2.0-85111724679; https://api.elsevier.com/content/abstract/scopus_id/85111724679

الاتاحة: http://hdl.handle.net/10261/282686
https://doi.org/10.1016/j.cub.2021.05.062
https://doi.org/10.13039/100012818
https://doi.org/10.13039/501100004837
https://doi.org/10.13039/501100000780
https://api.elsevier.com/content/abstract/scopus_id/85111724679

المؤلفون: Machado, André M., Samico, Rodrigo, Domingues, Marcos, Hagemann, Andreas, Valente, Luísa M.P., Malzahn, Arne M., Gomes-dos-Santos, André, Ruivo, Raquel, Navarro, Juan Carlos, Monroig, Óscar, Castro, L. Filipe C.

المساهمون: National Research Council Canada, Fundação para a Ciência e a Tecnologia, Norges Forskningsråd, Agencia Estatal de Investigación

المصدر: Marine Genomics ; volume 74, page 101084 ; ISSN 1874-7787

الاتاحة: http://dx.doi.org/10.1016/j.margen.2024.101084
https://api.elsevier.com/content/article/PII:S1874778724000023?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1874778724000023?httpAccept=text/plain

المؤلفون: Gomes-dos-Santos, André, Machado, André M., Graça Aranha, Sofia, Dias, Ester, Veríssimo, Ana, Castro, L. Filipe C., Froufe, Elsa

مصطلحات موضوعية: Chondrichthyes, Mitogenome, Elasmobranchi, Phylogenetics, Iberian Peninsula

Relation: http://hdl.handle.net/10400.1/15379

الاتاحة: http://hdl.handle.net/10400.1/15379
https://doi.org/10.1080/23802359.2021.1884030

المؤلفون: Gomes-dos-Santos, André, Lopes-Lima, Manuel, Machado, André M., Ramos, António Marcos, Usié, Ana, Bolotov, Ivan N., Vikhrev, Ilya V., Breton, Sophie, Castro, L. Filipe C., Fonseca, Rute R. da, Geist, Juergen, Österling, Martin E., Prié, Vincent, Teixeira, Amílcar, Gan, Han Ming, Simakov, Oleg, Froufe, Elsa

مصطلحات موضوعية: Margaritifera margaritifera, Freshwater mussel, Pearls, Unionida genome, Whole genome

Relation: info:eu-repo/grantAgreement/FCT/POR_NORTE/SFRH%2FBD%2F137935%2F2018/PT; info:eu-repo/grantAgreement/FCT/CEEC IND 2017/CEECIND%2F00627%2F2017%2FCP1420%2FCT0002/PT; CEECIND/03608/2020; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F04423%2F2020/PT; info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDP%2F04423%2F2020/PT; Gomes-Dos-Santos, André; Lopes-Lima, Manuel; Machado, André M.; Marcos Ramos, António; Usié, Ana; Bolotov, Ivan N.; Vikhrev, Ilya V.; Breton, Sophie; Castro, L. Filipe C.; da Fonseca, Rute R.; Geist, Juergen; Österling, Martin E.; Prié, Vincent; Teixeira, Amílcar; Gan, Han Ming; Simakov, Oleg; Froufe, Elsa (2021). The Crown Pearl: a draft genome assembly of the European freshwater pearl mussel Margaritifera margaritifera (Linnaeus, 1758). DNA research : an International Journal for Rapid Publication of Reports on Genes and Genomes. ISSN 1340-2838. 28:2, p. 1-; http://hdl.handle.net/10198/24349

الاتاحة: http://hdl.handle.net/10198/24349
https://doi.org/10.1093/dnares/dsab002

المؤلفون: Gomes-dos-Santos, A. (André), Vilas-Arrondo, N. (Nair), Machado, André M., Veríssimo, A. (Ana), Pérez, M. (Montse), Baldó, F. (Francisco), Castro, L.F.C., Froufe, E. (Elsa)

مصطلحات موضوعية: Chondrichthyes, Holocephali, chimaera, mitogenome, phylogenetics

Relation: http://hdl.handle.net/10508/15259

الاتاحة: http://hdl.handle.net/10508/15259
https://www.tandfonline.com/doi/pdf/10.1080/23802359.2020.1870887?needAccess=true
https://doi.org/10.1080/23802359.2020.1870887

المؤلفون: Gomes-dos-Santos, A. (André), Vilas-Arrondo, N. (Nair), Machado, André M., Veríssimo, A. (Ana), Pérez, M. (Montse), Baldó, F. (Francisco), Castro, L.F.C., Froufe, E. (Elsa)

مصطلحات موضوعية: Chondrichthyes, Holocephali, Chimaera, Mitogenome, Phylogenetics, fish, DNA, resources

Relation: http://hdl.handle.net/10508/11591; Mitochondrial DNA Part B, 6(2). 2021: 420-422

الاتاحة: http://hdl.handle.net/10508/11591
https://doi.org/10.1080/23802359.2020.1870887

المؤلفون: Domínguez-Pérez, Dany, Almeida, Daniela, Wissing, Josef, Machado, André M, Jänsch, Lothar, Antunes, Agostinho, Castro, Luís Filipe, Vasconcelos, Vitor, Campos, Alexandre, Cunha, Isabel

المساهمون: HZI,Helmholtz-Zentrum für Infektionsforschung GmbH, Inhoffenstr. 7,38124 Braunschweig, Germany.

المصدر: 22 ; 7 ; International journal of molecular sciences ; Switzerland

مصطلحات موضوعية: cement protein, iBAQ, mass spectrometry, protein expression, shotgun proteomics, underwater adhesion

Relation: Int J Mol Sci. 2021 Mar 25;22(7):3370. doi:10.3390/ijms22073370.; http://hdl.handle.net/10033/622857; International journal of molecular sciences

الاتاحة: http://hdl.handle.net/10033/622857
https://doi.org/10.3390/ijms22073370