المؤلفون: Zachary N. Flamholz, Charlotte Li, Libusha Kelly

المصدر: mBio, Vol 15, Iss 10 (2024)

مصطلحات موضوعية: artificial intelligence, protein language models, bacteriophage, computational biology, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2150-7511

URL الوصول: https://doaj.org/article/a6eb15972b074a4a9f037ad61bb9d8aa

المؤلفون: Kathryn M. Kauffman, William K. Chang, Julia M. Brown, Fatima A. Hussain, Joy Yang, Martin F. Polz, Libusha Kelly

المصدر: Nature Communications, Vol 13, Iss 1, Pp 1-20 (2022)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/3cb1d1fcf9ee4a649cf2fb673d2b23b4

المؤلفون: Gorka Lasso, Saad Khan, Stephanie A Allen, Margarette Mariano, Catalina Florez, Erika P Orner, Jose A Quiroz, Gregory Quevedo, Aldo Massimi, Aditi Hegde, Ariel S Wirchnianski, Robert H Bortz, Ryan J Malonis, George I Georgiev, Karen Tong, Natalia G Herrera, Nicholas C Morano, Scott J Garforth, Avinash Malaviya, Ahmed Khokhar, Ethan Laudermilch, M Eugenia Dieterle, J Maximilian Fels, Denise Haslwanter, Rohit K Jangra, Jason Barnhill, Steven C Almo, Kartik Chandran, Jonathan R Lai, Libusha Kelly, Johanna P Daily, Olivia Vergnolle

المصدر: PLoS Computational Biology, Vol 18, Iss 1, p e1009778 (2022)

مصطلحات موضوعية: Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

URL الوصول: https://doaj.org/article/6e20ef620826496397e91cdbc58ba169

المؤلفون: Gorka Lasso (215085), Saad Khan (296295), Stephanie A. Allen (11965463), Margarette Mariano (11965466), Catalina Florez (9905549), Erika P. Orner (11965469), Jose A. Quiroz (7832153), Gregory Quevedo (7133642), Aldo Massimi (8933996), Aditi Hegde (11965472), Ariel S. Wirchnianski (9905546), Robert H. Bortz III (11965475), Ryan J. Malonis (7832156), George I. Georgiev (9905522), Karen Tong (9905528), Natalia G. Herrera (3720082), Nicholas C. Morano (9905516), Scott J. Garforth (90494), Avinash Malaviya (11965478), Ahmed Khokhar (11965481), Ethan Laudermilch (9905552), M. Eugenia Dieterle (9905558), J. Maximilian Fels (9905555), Denise Haslwanter (4439281), Rohit K. Jangra (6639905), Jason Barnhill (9905561), Steven C. Almo (198342), Kartik Chandran (134142), Jonathan R. Lai (1339662), Libusha Kelly (61267), Johanna P. Daily (7832177), Olivia Vergnolle (3839596)

مصطلحات موضوعية: Biotechnology, Immunology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, white blood cell, wbc ), neutrophil, support decision making, shapley additive explanations, predicting fatality risk, powerful monitoring tool, higher predictive value, assessing fatality risk, predictive models rely, performing predictive models, machine learning models, inform clinical models, static demographic features, dependent biomarkers associated, immune biomarkers contribute, accurate outcome models, clinical outcome, immune biomarkers, models trained, substantially contribute, dependent manner, models based, %22">xlink ">, temporal analysis, symptom onset

Relation: https://figshare.com/articles/journal_contribution/Symptoms_and_complication_cohort_characteristics_/18646817

الاتاحة: https://doi.org/10.1371/journal.pcbi.1009778.s015

المؤلفون: Gorka Lasso (215085), Saad Khan (296295), Stephanie A. Allen (11965463), Margarette Mariano (11965466), Catalina Florez (9905549), Erika P. Orner (11965469), Jose A. Quiroz (7832153), Gregory Quevedo (7133642), Aldo Massimi (8933996), Aditi Hegde (11965472), Ariel S. Wirchnianski (9905546), Robert H. Bortz III (11965475), Ryan J. Malonis (7832156), George I. Georgiev (9905522), Karen Tong (9905528), Natalia G. Herrera (3720082), Nicholas C. Morano (9905516), Scott J. Garforth (90494), Avinash Malaviya (11965478), Ahmed Khokhar (11965481), Ethan Laudermilch (9905552), M. Eugenia Dieterle (9905558), J. Maximilian Fels (9905555), Denise Haslwanter (4439281), Rohit K. Jangra (6639905), Jason Barnhill (9905561), Steven C. Almo (198342), Kartik Chandran (134142), Jonathan R. Lai (1339662), Libusha Kelly (61267), Johanna P. Daily (7832177), Olivia Vergnolle (3839596)

مصطلحات موضوعية: Biotechnology, Immunology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, white blood cell, wbc ), neutrophil, support decision making, shapley additive explanations, predicting fatality risk, powerful monitoring tool, higher predictive value, assessing fatality risk, predictive models rely, performing predictive models, machine learning models, inform clinical models, static demographic features, dependent biomarkers associated, immune biomarkers contribute, accurate outcome models, clinical outcome, immune biomarkers, models trained, substantially contribute, dependent manner, models based, %22">xlink ">, temporal analysis, symptom onset

Relation: https://figshare.com/articles/journal_contribution/Machine_learning_/18646844

الاتاحة: https://doi.org/10.1371/journal.pcbi.1009778.s018

المؤلفون: Gorka Lasso (215085), Saad Khan (296295), Stephanie A. Allen (11965463), Margarette Mariano (11965466), Catalina Florez (9905549), Erika P. Orner (11965469), Jose A. Quiroz (7832153), Gregory Quevedo (7133642), Aldo Massimi (8933996), Aditi Hegde (11965472), Ariel S. Wirchnianski (9905546), Robert H. Bortz III (11965475), Ryan J. Malonis (7832156), George I. Georgiev (9905522), Karen Tong (9905528), Natalia G. Herrera (3720082), Nicholas C. Morano (9905516), Scott J. Garforth (90494), Avinash Malaviya (11965478), Ahmed Khokhar (11965481), Ethan Laudermilch (9905552), M. Eugenia Dieterle (9905558), J. Maximilian Fels (9905555), Denise Haslwanter (4439281), Rohit K. Jangra (6639905), Jason Barnhill (9905561), Steven C. Almo (198342), Kartik Chandran (134142), Jonathan R. Lai (1339662), Libusha Kelly (61267), Johanna P. Daily (7832177), Olivia Vergnolle (3839596)

مصطلحات موضوعية: Biotechnology, Immunology, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, white blood cell, wbc ), neutrophil, support decision making, shapley additive explanations, predicting fatality risk, powerful monitoring tool, higher predictive value, assessing fatality risk, predictive models rely, performing predictive models, machine learning models, inform clinical models, static demographic features, dependent biomarkers associated, immune biomarkers contribute, accurate outcome models, clinical outcome, immune biomarkers, models trained, substantially contribute, dependent manner, models based, %22">xlink ">, temporal analysis, symptom onset

Relation: https://figshare.com/articles/journal_contribution/Shapley_regression_/18646853

الاتاحة: https://doi.org/10.1371/journal.pcbi.1009778.s019

المؤلفون: Leah Guthrie, Libusha Kelly

المصدر: EBioMedicine, Vol 44, Iss , Pp 708-715 (2019)

مصطلحات موضوعية: Medicine, Medicine (General), R5-920

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S235239641930310X; https://doaj.org/toc/2352-3964

URL الوصول: https://doaj.org/article/cc8f9c4ae6464645b69b18079b9d3b14

المؤلفون: Mu Feng, Hilda Namanja-Magliano, Saranathan Rajagopalan, Tanmay Mishra, Rodrigo G. Ducati, Brett M. Hirsch, Libusha Kelly, Wendy Szymczak, Jorge Eduardo Fajardo, Simone Sidoli, Andras Fiser, William R. Jacobs, Vern L. Schramm

المصدر: ACS Infect Dis

مصطلحات موضوعية: Infectious Diseases, Article

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3635ace2b7e600019f3bf720452a2955
https://doi.org/10.1021/acsinfecdis.2c00644

المؤلفون: Sarah J Wolfson, Libusha Kelly

المصدر: eLife, Vol 9 (2020)

مصطلحات موضوعية: phenazines, metagenomics, ecology, Medicine, Science, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://elifesciences.org/articles/62983; https://doaj.org/toc/2050-084X

URL الوصول: https://doaj.org/article/bd829ccb094a44cfa61612b566101b0e

المؤلفون: Brandilyn A. Peters, Libusha Kelly, Tao Wang, Olivier Loudig, Thomas E. Rohan

مصطلحات موضوعية: Cancer, Cancer Risk Factors, Tumor Biology, Breast Cancer, Environmental Risk Factors, Microbiome, Tumor Microenvironment, Microbiome and the microenvironment

Relation: https://figshare.com/articles/dataset/Supplementary_Table_1_from_The_Breast_Microbiome_in_Breast_Cancer_Risk_and_Progression_A_Narrative_Review/24967251

الاتاحة: https://doi.org/10.1158/1055-9965.24967251.v1
https://figshare.com/articles/dataset/Supplementary_Table_1_from_The_Breast_Microbiome_in_Breast_Cancer_Risk_and_Progression_A_Narrative_Review/24967251

المؤلفون: Daniel Segrè, Sara Mitri, Wenying Shou, Gürol M. Süel, Itzhak Mizrahi, Libusha Kelly, María Rebolleda-Gómez, Christoph Ratzke, C. Brandon Ogbunugafor, Julia A. Schwartzman, Sergey Kryazhimskiy, Gabriel E. Leventhal, Christian Kost, Thomas Bell

المصدر: Cell Systems. 14:91-97

مصطلحات موضوعية: Histology, Cell Biology, Pathology and Forensic Medicine

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::7f72b2d7651644530e918d76fdcbe2cb
https://doi.org/10.1016/j.cels.2023.01.001

المؤلفون: Leah Guthrie, Sarah Wolfson, Libusha Kelly

المصدر: eLife, Vol 8 (2019)

مصطلحات موضوعية: gut microbiome, microbial metabolism, chemical landscape, Medicine, Science, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://elifesciences.org/articles/42866; https://doaj.org/toc/2050-084X

URL الوصول: https://doaj.org/article/28aeab00519740339ae91d581fc9dd8a

المؤلفون: Libusha Kelly, Zachary Flamholz, Steven Biller

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::e51b19f4bef0e280b6c6428c6b3d4fd6
https://doi.org/10.21203/rs.3.rs-2852098/v1

المؤلفون: Libusha Kelly, Saad Khan

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3e0ce1f366b1337037e3381b6d4b5122
https://doi.org/10.21203/rs.3.rs-1631596/v2

المؤلفون: Paul M. Berube (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Steven J. Biller (Department of Biological Sciences, Wellesley College), Thomas Hackl (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Shane L. Hogle (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Brandon M. Satinsky (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Jamie W. Becker (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Rogier Braakman (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Sara B. Collins (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Libusha Kelly (Department of Systems and Computational Biology, Department of Microbiology and Immunology, Albert Einstein College of Medicine), Jessie Berta-Thompson (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Allison Coe (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology), Kristin Bergauer (Department of Limnology and Bio-Oceanography, Faculty of Life Sciences, University of Vienna), Heather A. Bouman (Department of Earth Sciences, University of Oxford), Thomas J. Browning (Marine Biogeochemistry Division, GEOMAR Helmholtz Centre for Ocean Research), Daniele De Corte (Research and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology), Christel Hassler (Department F.-A. Forel for Environmental and Aquatic Sciences, University of Geneva), Yotam Hulata (Faculty of Biology, Technion–Israel Institute of Technology), Jeremy E. Jacquot (Department of Biological Sciences, University of Southern California, Los Angeles), Elizabeth W. Maas (Ministry for Primary Industries, New Zealand), Thomas Reinthaler (Department of Limnology and Bio-Oceanography, Faculty of Life Sciences, University of Vienna), Eva Sintes (Department of Limnology and Bio-Oceanography, Faculty of Life Sciences, University of Vienna), Taichi Yokokawa (Research and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology), Debbie Lindell (Faculty of Biology, Technion–Israel Institute of Technology), Ramunas Stepanauskas (Single Cell Genomics Center, Bigelow Laboratory for Ocean Sciences), Sallie W. Chisholm (Department of Civil and Environmental Engineering, Massachusetts Institute of Technology)

المصدر: Scientific Data

مصطلحات موضوعية: Biogeography, Coevolution, Genome, Marine biology, Microbial ecology

وصف الملف: application/pdf

Relation: isPartOf:https://phaidra.univie.ac.at/o:243553[u:scholar collection]; hdl:11353/10.1075078; https://phaidra.univie.ac.at/o:1075078

الاتاحة: https://doi.org/10.1038/sdata.2018.154
https://phaidra.univie.ac.at/o:1075078

المؤلفون: Huihui Li, Jacob S. Kazmi, Sungkyun Lee, Dachuan Zhang, Xin Gao, Maria Maryanovich, Lidiane Torres, Divij Verma, Libusha Kelly, Yelena Z. Ginzburg, Paul S. Frenette, Deepa Manwani

المصدر: Blood.

مصطلحات موضوعية: Immunology, Cell Biology, Hematology, Biochemistry

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aee6f3faae24e85d3dac6484866420ad
https://pubmed.ncbi.nlm.nih.gov/36315910

المؤلفون: Christian Jobin, Libusha Kelly, Arjun Byju, Dana J. Lukin, Thomas B. Bartnikas, Weijie Chen, Subho Ghosh, Matam Vijay-Kumar, Regina Lamendella, Jay X. Tang, Milankumar Prajapati, Katherine Sun, Beng San Yeoh, Shirshendu Chatterjee, Justin P. Wright, Wendy Szymczak, Hao Li, Zhen He, Sridhar Mani, Xiaoping Luo, Daniel B. Kearns, Arpan De

المصدر: Gastroenterology

مصطلحات موضوعية: Adult, Male, 0301 basic medicine, Movement, Enterobacter, Swarming (honey bee), Swarming motility, Inflammation, Biology, Inflammatory bowel disease, Article, Microbiology, Feces, Mice, Young Adult, 03 medical and health sciences, 0302 clinical medicine, Re-Epithelialization, medicine, Animals, Humans, Intestinal Mucosa, Colitis, Aged, Specific-pathogen-free, Aged, 80 and over, Bacteriological Techniques, Wound Healing, Microbial Viability, Hepatology, Probiotics, Gastroenterology, Middle Aged, Inflammatory Bowel Diseases, medicine.disease, biology.organism_classification, Gastrointestinal Microbiome, Mice, Inbred C57BL, Disease Models, Animal, 030104 developmental biology, Dysbiosis, Female, 030211 gastroenterology & hepatology, medicine.symptom, Bacteria

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6c4f1c9054b462dd91f73ee4a6929ca7
https://doi.org/10.1053/j.gastro.2021.03.017

المؤلفون: Ziv Cohen, Libusha Kelly

المصدر: Trends in Microbiology. 30:99-101

مصطلحات موضوعية: Microbiology (medical), Infectious Diseases, Bacteria, Microbiota, Virology, Humans, Drug Interactions, Bioaccumulation, Microbiology, Gastrointestinal Microbiome

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::995706d3795aebf4e9122450ec7b96b9
https://doi.org/10.1016/j.tim.2021.12.003

المؤلفون: Sarah J. Wolfson, Reese Hitchings, Karina Peregrina, Ziv Cohen, Saad Khan, Tugba Yilmaz, Marcel Malena, Edgar D. Goluch, Leonard Augenlicht, Libusha Kelly

المصدر: Nature metabolism. 4(10)

مصطلحات موضوعية: Male, Bacteria, Endocrinology, Diabetes and Metabolism, Microbiota, Cell Biology, Sulfides, Xenobiotics, Mice, Physiology (medical), Internal Medicine, Escherichia coli, Humans, Animals, Hydrogen Sulfide, Coloring Agents, Oxidation-Reduction, Azo Compounds, Sulfur

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7f877a1da93ded352774ee91607d4c4a
https://pubmed.ncbi.nlm.nih.gov/36266544

المؤلفون: Huihui Li, Jacob S Kazmi, Sungkyun Lee, Dachuan Zhang, Xin Gao, Maria Marianovich, Lidiane S. Torres, Divij Verma, Libusha Kelly, Yelena Ginzburg, Paul S. Frenette, Deepa Manwani

المصدر: Blood. 140:439-440

مصطلحات موضوعية: Immunology, Cell Biology, Hematology, Biochemistry

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::3a5673a8760958424ccf02db21b6fab6
https://doi.org/10.1182/blood-2022-162772