المؤلفون: Finn, Robert, D, Balech, Bachir, Burgin, Josephine, Chua, Physilia, Corre, Erwan, Cox, Cymon, J, Donati, Claudio, dos Santos, Vitor Martins, Fosso, Bruno, Hancock, John, Heil, Katharina, F, Ishaque, Naveed, Kale, Varsha, Kunath, Benoit, J, Médigue, Claudine, Pafilis, Evangelos, Pesole, Graziano, Richardson, Lorna, Santamaria, Monica, van den Bossche, Tim, Vizcaíno, Juan Antonio, Zafeiropoulos, Haris, Willassen, Nils, P, Pelletier, Eric, Batut, Bérénice

المساهمون: European Bioinformatics Institute Hinxton (EMBL-EBI), EMBL Heidelberg, ABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science (ABIMS), Fédération de recherche de Roscoff (FR2424), Station biologique de Roscoff = Roscoff Marine Station (SBR), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff = Roscoff Marine Station (SBR), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Universidade do Algarve (UAlg), Computational Biology Unit Bergen (CBU), University of Bergen (UiB), Department of Agrotechnology and Food Sciences Wageningen, Wageningen University and Research Wageningen (WUR), CNR - Bari, Univ West England, Dept Appl Sci, Bristol BS16 1QY, Avon, England, Luxembourg Centre For Systems Biomedicine (LCSB), Université du Luxembourg = University of Luxembourg = Universität Luxemburg (uni.lu), Analyse Bio-Informatique pour la Génomique et le Métabolisme (LABGeM), Génomique métabolique (UMR 8030), Genoscope - Centre national de séquençage Evry (GENOSCOPE), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS)-Genoscope - Centre national de séquençage Evry (GENOSCOPE), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Institut Français de Bioinformatique (IFB-CORE), Institut National de Recherche en Informatique et en Automatique (Inria)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of Crete Heraklion (UOC), Universiteit Gent = Ghent University = Université de Gand (UGENT), VIB-UGent Center for Medical Biotechnology, Laboratory of Molecular Bacteriology KU Leuven, Catholic University of Leuven = Katholieke Universiteit Leuven (KU Leuven), Global Oceans Systems Ecology & Evolution - Tara Oceans (GOSEE), Université de Perpignan Via Domitia (UPVD)-École Pratique des Hautes Études (EPHE), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Aix Marseille Université (AMU)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université d'Évry-Val-d'Essonne (UEVE)-Université de Toulon (UTLN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes 2016-2019 (UGA 2016-2019 )-Institut de Recherche pour le Développement (IRD Ile-de-France )-Ecole Normale Supérieure Paris-Saclay (ENS Paris Saclay)-European Molecular Biology Laboratory (EMBL)-NANTES UNIVERSITÉ - École Centrale de Nantes (Nantes Univ - ECN), Nantes Université (Nantes Univ)-Nantes Université (Nantes Univ)-Université australe du Chili, Plateforme Auvergne Bioinformatique (AuBi), Mésocentre Clermont Auvergne, Université Clermont Auvergne (UCA)-Université Clermont Auvergne (UCA), European Project: 211601,EC:FP7:INFRA,FP7-INFRASTRUCTURES-2007-1,ELIXIR(2007)

المصدر: ISSN: 2046-1402 ; F1000Research ; https://hal.science/hal-04796156 ; F1000Research, 2024, 13, pp.50. ⟨10.12688/f1000research.144515.1⟩.

مصطلحات موضوعية: ELIXIR Marine Metagenomics Community initiated amongst researchers Microbiome ELIXIR Community White, ELIXIR Marine Metagenomics Community, initiated amongst researchers Microbiome, ELIXIR Community, White, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology

Relation: info:eu-repo/grantAgreement/EC/FP7/211601/EU/European Life-science Infrastructure for Biological Information/ELIXIR

الاتاحة: https://hal.science/hal-04796156
https://hal.science/hal-04796156v1/document
https://hal.science/hal-04796156v1/file/ELIXIR-Microbiome-Community-F1000Research-01-2024.pdf
https://doi.org/10.12688/f1000research.144515.1

المؤلفون: Schnabel, Ellen, Vuillemin, Aurèle, Laczny, Cédric C., Kunath, Benoit J., Soares, André R., Primio, Rolando, Kallmeyer, Jens, the PROSPECTOMICS Consortium

المصدر: eISSN

وصف الملف: application/pdf

Relation: https://egusphere.copernicus.org/preprints/2024/egusphere-2024-1603/

الاتاحة: https://doi.org/10.5194/egusphere-2024-1603
https://egusphere.copernicus.org/preprints/2024/egusphere-2024-1603/

المؤلفون: Van Den Bossche, Tim, Armengaud, Jean, Benndorf, Dirk, Blakeley-Ruiz, Jose Alfredo, Brauer, Madita, Cheng, Kai, Creskey, Marybeth, Figeys, Daniel, Grenga, Lucia, Griffin, Timothy J, Henry, Céline, Hettich, Robert L, Holstein, Tanja, Jagtap, Pratik D, Jehmlich, Nico, Kleiner, Manuel, Kunath, Benoit J, Malliet, Xuxa, Martens, Lennart, Mehta, Subina, Mesuere, Bart, Ning, Zhibin, Tanca, Alessandro, Uzzau, Sergio, Verschaffelt, Pieter, Wang, Jing, Wilmes, Paul, Zhang, Xin, Li, Leyuan

الاتاحة: https://doi.org/10.26434/chemrxiv-2025-rh2q9
https://chemrxiv.org/engage/api-gateway/chemrxiv/assets/orp/resource/item/677ce36781d2151a022d3935/original/the-microbiologist-s-guide-to-metaproteomics.pdf

المؤلفون: DELOGU, Francesco, Kunath, Benoit J, Queirós, Pedro M, HALDER, Rashi, LEBRUN, Laura, Pope, Phillip B, MAY, Patrick, Widder, Stefanie, MULLER, Emilie, WILMES, Paul

المساهمون: Luxembourg Centre for Systems Biomedicine (LCSB): Eco-Systems Biology (Wilmes Group), Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group)

المصدر: Nature Ecology and Evolution (2023-11-13)

مصطلحات موضوعية: Ecological modeling, Microbial dynamics, Wasterwater, Time-series, Life sciences, Microbiology, Environmental sciences & ecology, Sciences du vivant, Microbiologie, Sciences de l’environnement & écologie

Relation: info:eu-repo/grantAgreement/EC/FP7/321567; https://www.nature.com/articles/s41559-023-02241-3.pdf; https://doi.org/10.5281/zenodo.7225349; CORE/17/SM/11689322; urn:issn:2397-334X; https://orbilu.uni.lu/handle/10993/58075; info:hdl:10993/58075; https://orbilu.uni.lu/bitstream/10993/58075/1/Delugo2023.NatEvoEco.pdf; info:pmid:37957315

الاتاحة: https://orbilu.uni.lu/handle/10993/58075
https://orbilu.uni.lu/bitstream/10993/58075/1/Delugo2023.NatEvoEco.pdf
https://doi.org/10.1038/s41559-023-02241-3

المؤلفون: Schiml, Valerie C., Delogu, Francesco, Kumar, Praveen, Kunath, Benoit J., Batut, Bérénice, Mehta, Subina, Johnson, James E., Grüning, Björn, Pope, Phillip B., Jagtap, Pratik D., Griffin, Timothy J., Arntzen, Magnus Ø

المصدر: Environmental microbiome. - 18 (2023) , 56, ISSN: 2524-6372

وصف الملف: pdf

Relation: https://freidok.uni-freiburg.de/data/254068

الاتاحة: https://freidok.uni-freiburg.de/data/254068
https://nbn-resolving.org/urn:nbn:de:bsz:25-freidok-2540680
https://doi.org/10.1186/s40793-023-00514-9
https://freidok.uni-freiburg.de/dnb/download/254068

المؤلفون: Delogu, Francesco, Kunath, Benoit J., Queirós, Pedro M., Halder, Rashi, Lebrun, Laura A., Pope, Phillip B., May, Patrick, Widder, Stefanie, Muller, Emilie E.L., Wilmes, Paul

المصدر: Nature Ecology and Evolution

Relation: Delogu, Francesco, Kunath, Benoit J., Queirós, Pedro M., Halder, Rashi, Lebrun, Laura A., Pope, Phillip B., May, Patrick, Widder, Stefanie, Muller, Emilie E.L., & Wilmes, Paul (2024) Forecasting the dynamics of a complex microbial community using integrated meta-omics. Nature Ecology and Evolution, 8(1), pp. 32-44.; https://eprints.qut.edu.au/252675/

الاتاحة: https://eprints.qut.edu.au/252675/

المؤلفون: Mehta, Subina, Jagtap, Pratik D., Crane, Marie, Leith, Emma, Batut, Bérénice, Hiltemann, Saskia, Arntzen, Magnus O., Kunath, Benoit J., Pope, Phillip B., Delogu, Francesco, Sajulga, Ray, Kumar, Praveen, Johnson, James E., Griffin, Timothy J.

المصدر: Mehta , S , Jagtap , P D , Crane , M , Leith , E , Batut , B , Hiltemann , S , Arntzen , M O , Kunath , B J , Pope , P B , Delogu , F , Sajulga , R , Kumar , P , Johnson , J E & Griffin , T J 2021 , ' ASaiM-MT : A validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework ' , F1000Research , vol. 10 , 103 . https://doi.org/10.12688/f1000research.28608.2

مصطلحات موضوعية: /dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being, name=SDG 3 - Good Health and Well-being

وصف الملف: application/pdf

الاتاحة: https://pure.eur.nl/en/publications/f81ce00c-bb6c-4ccd-8a6c-b5eec358e5d9
https://doi.org/10.12688/f1000research.28608.2
https://pure.eur.nl/ws/files/56146027/a_validated_and_optimized_ASaiM_workflow_for_metatranscriptomics_analysis_within_Galaxy_framework.pdf
http://www.scopus.com/inward/record.url?scp=85113944830&partnerID=8YFLogxK

المؤلفون: van den Bossche, Tim, Arntzen, Magnus Ø., Becher, Dörte, Benndorf, Dirk, Eijsink, Vincent, G H, Henry, Céline, Jagtap, Pratik, D, Jehmlich, Nico, Juste, Catherine, Kunath, Benoit, J, Mesuere, Bart, Muth, Thilo, Pope, Phillip, B, Seifert, Jana, Tanca, Alessandro, Uzzau, Sergio, Wilmes, Paul, Hettich, Robert, L, Armengaud, Jean

المساهمون: VIB-UGent Center for Medical Biotechnology, Universiteit Gent = Ghent University = Université de Gand (UGENT), Norwegian University of Life Sciences (NMBU), Institut für Mikrobiologie - Institute for Microbiology, Universität Greifswald = University of Greifswald, Otto-von-Guericke-Universität Magdeburg = Otto-von-Guericke University Magdeburg (OVGU), Max Planck Institute for Dynamics of Complex Technical Systems, Max-Planck-Gesellschaft, Anhalt University of Applied Sciences, MICrobiologie de l'ALImentation au Service de la Santé (MICALIS), AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of Minnesota Twin Cities (UMN), University of Minnesota System (UMN), Helmholtz Zentrum für Umweltforschung = Helmholtz Centre for Environmental Research (UFZ), Luxembourg Centre For Systems Biomedicine (LCSB), Université du Luxembourg = University of Luxembourg = Universität Luxemburg (uni.lu), Vakgroep Toegepaste Wiskunde en Informatica Gent (Department of Applied Mathematics, Computer Science and Statistics), Federal Institute for Materials Research and Testing - Bundesanstalt für Materialforschung und -prüfung (BAM), Universität Hohenheim = University of Hohenheim, Università degli Studi di Sassari = University of Sassari Sassari (UNISS), Oak Ridge National Laboratory Oak Ridge (ORNL), UT-Battelle, LLC, Laboratoire Innovations technologiques pour la Détection et le Diagnostic (LI2D), Service de Pharmacologie et Immunoanalyse (SPI), Médicaments et Technologies pour la Santé (MTS), Université Paris-Saclay-Institut des Sciences du Vivant Frédéric JOLIOT (JOLIOT), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Paris-Saclay-Institut des Sciences du Vivant Frédéric JOLIOT (JOLIOT), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Médicaments et Technologies pour la Santé (MTS), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Research Foundation-Flanders (FWO) SB Grant 1S90918N, European Project: 863664,H2020-EU.1.1. - EXCELLENT SCIENCE - European Research Council (ERC),ExpoBiome(2020)

المصدر: EISSN: 2049-2618 ; Microbiome ; https://hal.inrae.fr/hal-04127775 ; Microbiome, 2021, 9 (1), pp.243. ⟨10.1186/s40168-021-01176-w⟩ ; https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-021-01176-w

مصطلحات موضوعية: Microbiome, Metaproteomics, Multi-omics, Education, Interactions, Networking, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology

Relation: info:eu-repo/semantics/altIdentifier/pmid/34930457; info:eu-repo/grantAgreement//863664/EU/Deciphering the impact of exposures from the gut microbiome-derived molecular complex in human health and disease/ExpoBiome; PUBMED: 34930457; WOS: 000732982600002

الاتاحة: https://hal.inrae.fr/hal-04127775
https://hal.inrae.fr/hal-04127775v1/document
https://hal.inrae.fr/hal-04127775v1/file/2021_Den%20Bossche_Microbiome.pdf
https://doi.org/10.1186/s40168-021-01176-w

المؤلفون: Van Den Bossche, Tim, Kunath, Benoit J., Schallert, Kay, Schäpe, Stephanie S., Abraham, Paul E., Armengaud, Jean, Arntzen, Magnus Ø., Bassignani, Ariane, Benndorf, Dirk, Fuchs, Stephan, Giannone, Richard J., Griffin, Timothy J., Hagen, Live H., Halder, Rashi, Henry, Céline, Hettich, Robert L., Heyer, Robert, Jagtap, Pratik, Jehmlich, Nico, Jensen, Marlene, Juste, Catherine, Kleiner, Manuel, Langella, Olivier, Lehmann, Theresa, Leith, Emma, May, Patrick, Mesuere, Bart, Miotello, Guylaine, Peters, Samantha L., Pible, Olivier, Queiros, Pedro T., Reichl, Udo, Renard, Bernhard Y., Schiebenhoefer, Henning, Sczyrba, Alexander, Tanca, Alessandro, Trappe, Kathrin, Trezzi, Jean-Pierre, Uzzau, Sergio, Verschaffelt, Pieter, von Bergen, Martin, Wilmes, Paul, Wolf, Maximilian, Martens, Lennart, Muth, Thilo

المصدر: NATURE COMMUNICATIONS ; ISSN: 2041-1723

مصطلحات موضوعية: Biology and Life Sciences, metaproteomics, proteomics, microbiome, MULTIPLE SEARCH ENGINES, PROTEIN INFERENCE, MICROBIAL COMMUNITIES, EXTRACTION METHODS, SEQUENCE DATABASE, MASS-SPECTROMETRY, PROTEOMICS DATA, IDENTIFICATION, PEPTIDE, GENOMES

وصف الملف: application/pdf

Relation: https://biblio.ugent.be/publication/8730913; https://biblio.ugent.be/publication/8730913/file/8730916

الاتاحة: https://biblio.ugent.be/publication/8730913
http://hdl.handle.net/1854/LU-8730913
https://doi.org/10.1038/s41467-021-27542-8
https://biblio.ugent.be/publication/8730913/file/8730916

المؤلفون: Andersen, Thea Os, Kunath, Benoit J., Hagen, Live H., Arntzen, Magnus Ø., Pope, Phillip B.

المساهمون: Norges Forskningsråd, Novo Nordisk Fonden

المصدر: Methods ; volume 186, page 42-51 ; ISSN 1046-2023

الاتاحة: http://dx.doi.org/10.1016/j.ymeth.2020.07.011
https://api.elsevier.com/content/article/PII:S1046202320301067?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1046202320301067?httpAccept=text/plain

المؤلفون: Schnabel, Ellen, Vuillemin, Aurèle, Laczny, Cédric C, Kunath, Benoit J, Soares, André R, Di Primo, Rolando, Kallmeyer, Jens, PROSPECTOMICS, Consortium

مصطلحات موضوعية: Aluminium oxide, Barents Sea, Barium, Calcium oxide, Chromium, Depth, bottom/max, sediment/rock, top/min, Elements, total, ELEVATION, Event label, Gallium, GC, Gravity corer, H.U. Sverdrup II, hydrocarbon seepage, Iron oxide, Fe2O3, Latitude of event, Location, Location type, Longitude of event, Loss on ignition, Magnesium oxide, Manganese oxide, Nickel, Niobium, Phosphorus pentoxide

جغرافية الموضوع: MEDIAN LATITUDE: 71.966404 * MEDIAN LONGITUDE: 21.600443 * SOUTH-BOUND LATITUDE: 71.956215 * WEST-BOUND LONGITUDE: 21.470713 * NORTH-BOUND LATITUDE: 71.996099 * EAST-BOUND LONGITUDE: 21.651513 * DATE/TIME START: 2021-10-30T16:46:00 * DATE/TIME END: 2021-11-05T12:44:00 * MINIMUM ELEVATION: -356.0 m * MAXIMUM ELEVATION: -346.0 m

وصف الملف: text/tab-separated-values, 1500 data points

Relation: Schnabel, Ellen; Vuillemin, Aurèle; Laczny, Cédric C; Kunath, Benoit J; Soares, André R; di Primio, Rolando; Kallmeyer, Jens; PROSPECTOMICS, Consortium (preprint): Influence of minor hydrocarbon seepage on sulfur cycling in marine subsurface sediments and its significance for hydrocarbon reservoir detection. https://doi.org/10.5194/egusphere-2024-1603; https://doi.pangaea.de/10.1594/PANGAEA.974346

الاتاحة: https://doi.pangaea.de/10.1594/PANGAEA.974346

المؤلفون: Schnabel, Ellen, Vuillemin, Aurèle, Laczny, Cédric C, Kunath, Benoit J, Soares, André R, Di Primo, Rolando, Kallmeyer, Jens, PROSPECTOMICS, Consortium

مصطلحات موضوعية: Alkalinity, total, Arsenic, Barents Sea, Barium, Calcium, Carbon dioxide, Cell counts, microbial, Copper, DEPTH, sediment/rock, ELEVATION, Event label, Fluorescence optical microscopy, Gas chromatography, GC, Gravity corer, H.U. Sverdrup II, hydrocarbon seepage, Hydrogen sulfide, Iron, Latitude of event, Location, Location type, Longitude of event, Magnesium, Manganese, Methane, Nickel

جغرافية الموضوع: MEDIAN LATITUDE: 71.966404 * MEDIAN LONGITUDE: 21.600443 * SOUTH-BOUND LATITUDE: 71.956215 * WEST-BOUND LONGITUDE: 21.470713 * NORTH-BOUND LATITUDE: 71.996099 * EAST-BOUND LONGITUDE: 21.651513 * DATE/TIME START: 2021-10-30T16:46:00 * DATE/TIME END: 2021-11-05T12:44:00 * MINIMUM ELEVATION: -356.0 m * MAXIMUM ELEVATION: -346.0 m

وصف الملف: text/tab-separated-values, 9877 data points

Relation: Schnabel, Ellen; Vuillemin, Aurèle; Laczny, Cédric C; Kunath, Benoit J; Soares, André R; di Primio, Rolando; Kallmeyer, Jens; PROSPECTOMICS, Consortium (preprint): Influence of minor hydrocarbon seepage on sulfur cycling in marine subsurface sediments and its significance for hydrocarbon reservoir detection. https://doi.org/10.5194/egusphere-2024-1603; https://doi.pangaea.de/10.1594/PANGAEA.974341

الاتاحة: https://doi.pangaea.de/10.1594/PANGAEA.974341

المؤلفون: Herold, M. (Malte), Martínez Arbas, S. (Susana), Narayanasamy, S. (Shaman), Sheik, Abdul R., Kleine-Borgmann, Luise A. K., Lebrun, Laura A., Kunath, Benoît J., Roume, H. (Hugo), Bessarab, I. (Irina), Williams, Rohan B. H., Gillece, John D., Schupp, James M., Keim, Paul S., Jäger, C. (Christian), Hoopmann, Michael R., Moritz, Robert L., Ye, Y. (Yuzhen), Li, S. (Sujun), Tang, H. (Haixu), Heintz-Buschart, A. (Anna), May, P. (Patrick), Muller, E. (Emilie), Laczny, Cedric C., Wilmes, P. (Paul)

مصطلحات موضوعية: Aucun

الاتاحة: https://www.nature.com/articles/s41467-020-19006-2

المؤلفون: Martínez Arbas, Susana, Narayanasamy, Shaman, Herold, Malte, Lebrun, Laura A., Hoopmann, Michael R., Li, Sujun, Lam, Tony J., Kunath, Benoît J., Hicks, Nathan D., Liu, Cindy M., Price, Lance B., Laczny, Cedric C., Gillece, John D., Schupp, James M., Keim, Paul S., Moritz, Robert L., Faust, Karoline, Tang, Haixu, Ye, Yuzhen, Skupin, Alexander, May, Patrick, Muller, Emilie E. L., Wilmes, Paul

المساهمون: Fonds National de la Recherche Luxembourg, European Union Joint Programming in Neurodegenerative Diseases grant (INTER/JPND/12/01) Union ERASysAPP grant

المصدر: Nature Microbiology ; volume 6, issue 1, page 123-135 ; ISSN 2058-5276

الاتاحة: http://dx.doi.org/10.1038/s41564-020-00794-8
https://www.nature.com/articles/s41564-020-00794-8.pdf
https://www.nature.com/articles/s41564-020-00794-8

المؤلفون: Herold, Malte, Martínez Arbas, Susana, Narayanasamy, Shaman, Sheik, Abdul R., Kleine-Borgmann, Luise A. K., Lebrun, Laura A., Kunath, Benoît J., Roume, Hugo, Bessarab, Irina, Williams, Rohan B. H., Gillece, John D., Schupp, James M., Keim, Paul S., Jäger, Christian, Hoopmann, Michael R., Moritz, Robert L., Ye, Yuzhen, Li, Sujun, Tang, Haixu, Heintz-Buschart, Anna, May, Patrick, Muller, Emilie E. L., Laczny, Cedric C., Wilmes, Paul

المساهمون: Fonds National de la Recherche Luxembourg

المصدر: Nature Communications ; volume 11, issue 1 ; ISSN 2041-1723

الاتاحة: http://dx.doi.org/10.1038/s41467-020-19006-2
https://www.nature.com/articles/s41467-020-19006-2.pdf
https://www.nature.com/articles/s41467-020-19006-2

المؤلفون: Kunath, Benoit, J, Delogu, Francesco, Naas, Adrian, E, Arntzen, Magnus Ø., Eijsink, Vincent, Henrissat, Bernard, Hvidsten, Torgeir, Pope, Philippe B.

المساهمون: Norwegian University of Life Sciences (NMBU), Architecture et fonction des macromolécules biologiques (AFMB), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), The Research Council of Norway (FRIPRO program, P.B.P.: 250479/NorZymeD, V.G.H.E.: 221568), as well as the European Research Commission Starting Grant Fellowship (awarded to P.B.P., 336355—MicroDE). The sequencing service was provided by the Norwegian Sequencing Centre, European Project: 336355,EC:FP7:ERC,ERC-2013-StG,MICRODE(2014)

المصدر: ISSN: 1751-7362.

مصطلحات موضوعية: Metagenomics, Microbial ecology, Transcriptomics, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]

Relation: info:eu-repo/semantics/altIdentifier/pmid/30315317; info:eu-repo/grantAgreement/EC/FP7/336355/EU/Interpreting the irrecoverable microbiota in digestive ecosystems/MICRODE; PUBMED: 30315317; WOS: 000459053600004

الاتاحة: https://hal.science/hal-02611222
https://hal.science/hal-02611222v1/document
https://hal.science/hal-02611222v1/file/s41396-018-0290-y.pdf
https://doi.org/10.1038/s41396-018-0290-y

المؤلفون: Ostrowski, Matthew P., La Rosa, Sabina Leanti, Kunath, Benoit J., Robertson, Andrew, Pereira, Gabriel, Hagen, Live H., Varghese, Neha J., Qiu, Ling, Yao, Tianming, Flint, Gabrielle, Li, James, McDonald, Sean P., Buttner, Duna, Pudlo, Nicholas A., Schnizlein, Matthew K., Young, Vincent B., Brumer, Harry, Schmidt, Thomas M., Terrapon, Nicolas, Lombard, Vincent, Henrissat, Bernard, Hamaker, Bruce, Eloe-Fadrosh, Emiley A., Tripathi, Ashootosh, Pope, Phillip B., Martens, Eric C.

المصدر: Nature Microbiology

Relation: https://rdcu.be/dW6ZG; Ostrowski, Matthew P., La Rosa, Sabina Leanti, Kunath, Benoit J., Robertson, Andrew, Pereira, Gabriel, Hagen, Live H., Varghese, Neha J., Qiu, Ling, Yao, Tianming, Flint, Gabrielle, Li, James, McDonald, Sean P., Buttner, Duna, Pudlo, Nicholas A., Schnizlein, Matthew K., Young, Vincent B., Brumer, Harry, Schmidt, Thomas M., Terrapon, Nicolas, Lombard, Vincent, Henrissat, Bernard, Hamaker, Bruce, Eloe-Fadrosh, Emiley A., Tripathi, Ashootosh, Pope, Phillip B., & Martens, Eric C. (2022) Mechanistic insights into consumption of the food additive xanthan gum by the human gut microbiota. Nature Microbiology, 7(4), pp. 556-569.; https://eprints.qut.edu.au/252643/

الاتاحة: https://eprints.qut.edu.au/252643/

المؤلفون: Mehta, Subina, Jagtap, Pratik D., Crane, Marie, Leith, Emma, Batut, Bérénice, Hiltemann, Saskia, Arntzen, Magnus O., Kunath, Benoit J., Pope, Phillip B., Delogu, Francesco, Sajulga, Ray, Kumar, Praveen, Johnson, James E., Griffin, Timothy J.

المصدر: F1000Research

مصطلحات موضوعية: Functional analysis, Galaxy, Metatranscriptomics, Microbiome

Relation: Mehta, Subina, Jagtap, Pratik D., Crane, Marie, Leith, Emma, Batut, Bérénice, Hiltemann, Saskia, Arntzen, Magnus O., Kunath, Benoit J., Pope, Phillip B., Delogu, Francesco, Sajulga, Ray, Kumar, Praveen, Johnson, James E., & Griffin, Timothy J. (2021) ASaiM-MT: A validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework. F1000Research, 10, Article number: 103.; https://eprints.qut.edu.au/252741/

الاتاحة: https://eprints.qut.edu.au/252741/

المؤلفون: Martinez Arbas, Susana, Narayanasamy, Shaman, Herold, Malte, Lebrun, Laura, Hoopmann, Michael R., Li, Sujun, Lam, Tony J., Kunath, Benoît J., Hicks, Nathan D., Liu, Cindy M., Price, Lance B., Laczny, Cedric Christian, Gillece, John D., Schupp, James M., Keim, Paul S., Moritz, Robert L., Faust, Karoline, Tang, Haixu, Ye, Yuzhen, Skupin, Alexander, May, Patrick, Muller, Emilie E. L., Wilmes, Paul

مصطلحات الفهرس: Bacteriology, Ecosystem ecology, Metagenomics, Microbiome, Network topology, info:eu-repo/semantics/article

URL: https://www.nature.com/articles/s41564-020-00794-8
http://orbilu.uni.lu/handle/10993/51816
http://orbilu.uni.lu/bitstream/10993/51816/1/Martinez_microbial_communities_Nature_Microbio_2020.pdf

المؤلفون: Kunath, Benoit J., Minniti, Giusi, Skaugen, Morten, Hagen, Live H., Vaaje-Kolstad, Gustav, Eijsink, Vincent G. H., Pope, Phil B., Arntzen, Magnus Ø.

المصدر: Advances in Experimental Medicine and Biology ; Emerging Sample Treatments in Proteomics ; page 187-215 ; ISSN 0065-2598 2214-8019 ; ISBN 9783030122973 9783030122980

الاتاحة: http://dx.doi.org/10.1007/978-3-030-12298-0_8
http://link.springer.com/content/pdf/10.1007/978-3-030-12298-0_8