المؤلفون: Honorato, Rodrigo Vargas, Koukos, Panagiotis I., Jiménez-García, Brian, Tsaregorodtsev, Andrei, Verlato, Marco, Giachetti, Andrea, Rosato, Antonio, Bonvin, Alexandre M. J. J.

مصطلحات موضوعية: Quantitative Biology - Biomolecules, Computer Science - Computational Engineering, Finance, and Science, Computer Science - Distributed, Parallel, and Cluster Computing

URL الوصول: http://arxiv.org/abs/2107.01056

المؤلفون: Basciu, Andrea, Koukos, Panagiotis I., Malloci, Giuliano, Bonvin, Alexandre M. J. J., Vargiu, Attilio V.

المصدر: Journal of Computer-Aided Molecular Design 34, 149-162 (2020)

مصطلحات موضوعية: Quantitative Biology - Biomolecules, Condensed Matter - Soft Condensed Matter

URL الوصول: http://arxiv.org/abs/2005.04142

المؤلفون: Matos-Filipe, Pedro, Preto, António J., Koukos, Panagiotis I., Mourão, Joana, Bonvin, Alexandre M. J. J., Moreira, Irina S.

مصطلحات موضوعية: Quantitative Biology - Biomolecules

URL الوصول: http://arxiv.org/abs/1902.02321

المؤلفون: Baltzis, Athanasios S., Koukos, Panagiotis I., Glykos, Nicholas M.

مصطلحات موضوعية: Quantitative Biology - Biomolecules, Quantitative Biology - Quantitative Methods

URL الوصول: http://arxiv.org/abs/1512.04024

المؤلفون: Koukos, Panagiotis I., Glykos, Nicholas M.

مصطلحات موضوعية: Quantitative Biology - Quantitative Methods, Quantitative Biology - Biomolecules

URL الوصول: http://arxiv.org/abs/1309.1108

المؤلفون: Honorato, Rodrigo V., Trellet, Mikael E., Jiménez-García, Brian, Schaarschmidt, Jörg J., Giulini, Marco, Reys, Victor, Koukos, Panagiotis I., Rodrigues, João P. G. L. M., Karaca, Ezgi, van Zundert, Gydo C. P., Roel-Touris, Jorge, van Noort, Charlotte W., Jandová, Zuzana, Melquiond, Adrien S. J., Bonvin, Alexandre M. J. J.

المصدر: Nature Protocols; November 2024, Vol. 19 Issue: 11 p3219-3241, 23p

المؤلفون: Koukos, Panagiotis I., Dehghani-Ghahnaviyeh, Sepehr, Velez-Vega, Camilo, Manchester, John, Tieleman, D. Peter, Duca, José S., Souza, Paulo C. T., Cournia, Zoe

المصدر: Journal of Chemical Theory & Computation; 12/12/2023, Vol. 19 Issue 23, p8901-8918, 18p

المؤلفون: Lensink M. F., Brysbaert G., Mauri T., Nadzirin N., Velankar S., Chaleil R. A. G., Clarence T., Bates P. A., Kong R., Liu B., Yang G., Liu M., Shi H., Lu X., Chang S., Roy R. S., Quadir F., Liu J., Cheng J., Antoniak A., Czaplewski C., Gieldon A., Kogut M., Lipska A. G., Liwo A., Lubecka E. A., Maszota-Zieleniak M., Sieradzan A. K., Slusarz R., Wesolowski P. A., Zieba K., Del Carpio Munoz C. A., Ichiishi E., Harmalkar A., Gray J. J., Bonvin A. M. J. J., Ambrosetti F., Vargas Honorato R., Jandova Z., Jimenez-Garcia B., Koukos P. I., Van Keulen S., Van Noort C. W., Reau M., Roel-Touris J., Kotelnikov S., Padhorny D., Porter K. A., Alekseenko A., Ignatov M., Desta I., Ashizawa R., Sun Z., Ghani U., Hashemi N., Vajda S., Kozakov D., Rosell M., Rodriguez-Lumbreras L. A., Fernandez-Recio J., Karczynska A., Grudinin S., Yan Y., Li H., Lin P., Huang S. -Y., Christoffer C., Terashi G., Verburgt J., Sarkar D., Aderinwale T., Wang X., Kihara D., Nakamura T., Hanazono Y., Gowthaman R., Guest J. D., Yin R., Taherzadeh G., Pierce B. G., Barradas-Bautista D., Cao Z., Cavallo L., Oliva R., Sun Y., Zhu S., Shen Y., Park T., Woo H., Yang J., Kwon S., Won J., Seok C., Kiyota Y., Kobayashi S., Harada Y., Takeda-Shitaka M., Kundrotas P. J., Singh A., Vakser I. A., Dapkunas J., Olechnovic K., Venclovas C., Duan R., Qiu L., Xu X., Zhang S., Zou X., Wodak S. J.

المساهمون: Lensink, M. F., Brysbaert, G., Mauri, T., Nadzirin, N., Velankar, S., Chaleil, R. A. G., Clarence, T., Bates, P. A., Kong, R., Liu, B., Yang, G., Liu, M., Shi, H., Lu, X., Chang, S., Roy, R. S., Quadir, F., Liu, J., Cheng, J., Antoniak, A., Czaplewski, C., Gieldon, A., Kogut, M., Lipska, A. G., Liwo, A., Lubecka, E. A., Maszota-Zieleniak, M., Sieradzan, A. K., Slusarz, R., Wesolowski, P. A., Zieba, K., Del Carpio Munoz, C. A., Ichiishi, E., Harmalkar, A., Gray, J. J., Bonvin, A. M. J. J., Ambrosetti, F., Vargas Honorato, R., Jandova, Z., Jimenez-Garcia, B., Koukos, P. I., Van Keulen, S., Van Noort, C. W., Reau, M., Roel-Touris, J., Kotelnikov, S., Padhorny, D., Porter, K. A., Alekseenko, A., Ignatov, M., Desta, I., Ashizawa, R., Sun, Z., Ghani, U., Hashemi, N., Vajda, S., Kozakov, D., Rosell, M., Rodriguez-Lumbreras, L. A., Fernandez-Recio, J., Karczynska, A., Grudinin, S., Yan, Y., Li, H., Lin, P., Huang, S. -Y., Christoffer, C., Terashi, G., Verburgt, J., Sarkar, D., Aderinwale, T., Wang, X., Kihara, D., Nakamura, T., Hanazono, Y., Gowthaman, R., Guest, J. D., Yin, R., Taherzadeh, G., Pierce, B. G., Barradas-Bautista, D., Cao, Z., Cavallo, L., Oliva, R., Sun, Y., Zhu, S., Shen, Y., Park, T., Woo, H., Yang, J., Kwon, S., Won, J., Seok, C., Kiyota, Y., Kobayashi, S., Harada, Y., Takeda-Shitaka, M., Kundrotas, P. J., Singh, A., Vakser, I. A.

مصطلحات موضوعية: blind prediction, CAPRI, CASP, docking, oligomeric state, protein assemblie, protein complexe, protein docking, protein–protein interaction, template-based modeling

Relation: info:eu-repo/semantics/altIdentifier/wos/WOS:000695227300001; volume:89; issue:12; firstpage:1800; lastpage:1823; numberofpages:24; journal:PROTEINS; http://hdl.handle.net/11367/100134; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85114742273

الاتاحة: http://hdl.handle.net/11367/100134
https://doi.org/10.1002/prot.26222

المؤلفون: Bonvin, Alexandre M. J. J., Geng, C., van Dijk, M., Karaca, E., Kastritis, P. L., Koukos, P. I., Kurkcuoglu, Z., Melquiond, A. S. J., Rogridues, J. P. G. L. M., Schaarschmidt, J., Schmitz, C., Roel-Touris, J., Trellet, M. E., de Vries, S., Vangone, A., Xue, L., van Zundert, G. C. P.

المصدر: Encyclopedia of Biophysics ; page 1-3 ; ISBN 9783642359439 9783642359439

الاتاحة: http://dx.doi.org/10.1007/978-3-642-35943-9_330-1
http://link.springer.com/content/pdf/10.1007/978-3-642-35943-9_330-1

المؤلفون: Moreira, Irina S., Koukos, Panagiotis I., Melo, Rita, Almeida, José G., Preto, Antonio J., Schaarschmidt, Joerg, Trellet, Mikael, Gümüş, Zeynep H, Costa, Joaquim, Bonvin, Alexandre M. J. J.

مصطلحات موضوعية: Animals, Binding Sites, Humans, Machine Learning, Protein Binding, Protein Interaction Mapping, Sequence Analysis, Protein, Software

Relation: 2045-2322

الاتاحة: http://hdl.handle.net/10316/108366

المؤلفون: Almeida, Jose G., Preto, Antonio J., Koukos, Panagiotis I., Bonvin, Alexandre M. J. J., Moreira, Irina S.

مصطلحات موضوعية: Algorithms, Computational Biology, Humans, Membrane Proteins, Molecular Dynamics Simulation, Software

Relation: F/00578/2014; MEMBRANEPROT 659826; CENTRO-01-0145-FEDER-000008; TOP-PUNT grant BC.000664.1; https://www.sciencedirect.com/science/article/pii/S000527361730233X?via%3Dihub

الاتاحة: http://hdl.handle.net/10316/48362

المؤلفون: Koukos, Panagiotis I., Glykos, Nicholas M.

المصدر: Journal of Chemical Information & Modeling; Jan2014, Vol. 54 Issue 1, p209-217, 9p

المؤلفون: Koukos, Panagiotis I., Réau, Manon, Bonvin, Alexandre M. J. J.

المصدر: Journal of Chemical Information and Modeling; 20210101, Issue: Preprints