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1Academic Journal
المؤلفون: Lee, Benjamin D, Neri, Uri, Roux, Simon, Wolf, Yuri I, Camargo, Antonio Pedro, Krupovic, Mart, Consortium, RNA Virus Discovery, Simmonds, Peter, Kyrpides, Nikos, Gophna, Uri, Dolja, Valerian V, Koonin, Eugene V
المصدر: Cell. 186(3)
مصطلحات موضوعية: Biological Sciences, Genetics, Infectious Diseases, RNA, Circular, Viroids, RNA, Catalytic, RNA, Viral, Ecosystem, Plant Diseases, RNA Virus Discovery Consortium, Medical and Health Sciences, Developmental Biology, Biological sciences, Biomedical and clinical sciences
وصف الملف: application/pdf
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2Academic Journal
المؤلفون: Simmonds, Peter, Adriaenssens, Evelien M, Zerbini, F Murilo, Abrescia, Nicola GA, Aiewsakun, Pakorn, Alfenas-Zerbini, Poliane, Bao, Yiming, Barylski, Jakub, Drosten, Christian, Duffy, Siobain, Duprex, W Paul, Dutilh, Bas E, Elena, Santiago F, García, Maria Laura, Junglen, Sandra, Katzourakis, Aris, Koonin, Eugene V, Krupovic, Mart, Kuhn, Jens H, Lambert, Amy J, Lefkowitz, Elliot J, Łobocka, Małgorzata, Lood, Cédric, Mahony, Jennifer, Meier-Kolthoff, Jan P, Mushegian, Arcady R, Oksanen, Hanna M, Poranen, Minna M, Reyes-Muñoz, Alejandro, Robertson, David L, Roux, Simon, Rubino, Luisa, Sabanadzovic, Sead, Siddell, Stuart, Skern, Tim, Smith, Donald B, Sullivan, Matthew B, Suzuki, Nobuhiro, Turner, Dann, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Vasilakis, Nikos
المصدر: PLOS Biology. 21(2)
مصطلحات موضوعية: Infectious Diseases, Infection, Humans, Bacteriophages, Metagenomics, Phylogeny, Viruses, Biological Sciences, Agricultural and Veterinary Sciences, Medical and Health Sciences, Developmental Biology
وصف الملف: application/pdf
URL الوصول: https://escholarship.org/uc/item/99c0923b
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3
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4
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5Report
المؤلفون: Wen, Tao, Koonin, Eugene V., Cheong, Kang Hao
مصطلحات موضوعية: Quantitative Biology - Populations and Evolution, Nonlinear Sciences - Chaotic Dynamics
URL الوصول: http://arxiv.org/abs/2106.13527
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6
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7Academic Journal
المؤلفون: Mutz, Pascal, Rochman, Nash D., Wolf, Yuri I., Faure, Guilhem, Zhang, Feng, Koonin, Eugene V.
المصدر: Proceedings of the National Academy of Sciences of the United States of America, 2022 Jun 01. 119(23), 1-12.
URL الوصول: https://www.jstor.org/stable/27152080
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8Academic Journal
المؤلفون: Tang, Shu-Kun, Zhi, Xiao-Yang, Zhang, Yao, Makarova, Kira S., Liu, Bing-Bing, Zheng, Guo-Song, Zhang, Zhen-Peng, Zheng, Hua-Jun, Wolf, Yuri I., Zhao, Yu-Rong, Jiang, Song-Hao, Chen, Xi-Ming, Li, En-Yuan, Zhang, Tao, Chen, Pei-Ru, Feng, Yu-Zhou, Xiang, Ming-Xian, Lin, Zhi-Qian, Shi, Jia-Hui, Chang, Cheng, Zhang, Xue, Li, Rui, Lou, Kai, Wang, Yun, Chang, Lei, Yin, Min, Yang, Ling-Ling, Gao, Hui-Ying, Zhang, Zhong-Kai, Tao, Tian-Shen, Guan, Tong-Wei, He, Fu-Chu, Lu, Yin-Hua, Cui, Heng-Lin, Koonin, Eugene V., Zhao, Guo-Ping, Xu, Ping
المصدر: Nature Communications ; volume 15, issue 1 ; ISSN 2041-1723
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9Academic Journal
المؤلفون: Yutin, Natalya, Tolstoy, Igor, Mutz, Pascal, Wolf, Yuri, I, Krupovic, Mart, Koonin, Eugene, V
المساهمون: National Institutes of Health Bethesda, MD, USA (NIH), Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), N.Y., P.M., I.T., Y.I.W. and E.V.K. are funded by the Intramural Research Program of the National Institutes of Health (National Library of Medicine).
المصدر: ISSN: 1743-422X ; Virology Journal ; https://pasteur.hal.science/pasteur-04679278 ; Virology Journal, 2024, 21 (1), pp.200. ⟨10.1186/s12985-024-02482-z⟩.
مصطلحات موضوعية: Evolution of viruses, DNA polymerases, Bacterial antivirus defense, Horizontal gene transfer, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology
Relation: info:eu-repo/semantics/altIdentifier/pmid/39187833; pasteur-04679278; https://pasteur.hal.science/pasteur-04679278; https://pasteur.hal.science/pasteur-04679278/document; https://pasteur.hal.science/pasteur-04679278/file/Yutin2024VirolJ.pdf; PUBMED: 39187833
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10Academic Journal
المؤلفون: Wen, Tao, Koonin, Eugene V., Cheong, Kang Hao
المساهمون: School of Physical and Mathematical Sciences
مصطلحات موضوعية: Mathematical Sciences, Antagonistic coevolution, Parasite
وصف الملف: application/pdf
Relation: MOET2EP50120-0021; Physical Review Research; https://hdl.handle.net/10356/179840; 023104
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11Academic Journal
المؤلفون: Wu, Yi, Garushyants, Sofya K., van den Hurk, Anne, Aparicio-Maldonado, Cristian, Krishnakant Kushwaha, Simran, King, Claire M., Ou, Yaqing, Todeschini, Thomas C., Clokie, Martha R.J., Millard, Andrew D., Gençay, Yilmaz Emre, Koonin, Eugene V., Nobrega, Franklin L.
وصف الملف: text
Relation: https://eprints.soton.ac.uk/491528/1/1-s2.0-S1931312824000192-main.pdf; Wu, Yi, Garushyants, Sofya K., van den Hurk, Anne, Aparicio-Maldonado, Cristian, Krishnakant Kushwaha, Simran, King, Claire M., Ou, Yaqing, Todeschini, Thomas C., Clokie, Martha R.J., Millard, Andrew D., Gençay, Yilmaz Emre, Koonin, Eugene V. and Nobrega, Franklin L. (2024) Bacterial defense systems exhibit synergistic anti-phage activity. Cell Host & Microbe, 32 (4), 557-572.e6. (doi:10.1016/j.chom.2024.01.015 ).
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12Academic Journal
المؤلفون: Yutin, Natalya, Mutz, Pascal, Krupovic, Mart, Koonin, Eugene, V
المساهمون: National Library of Medicine Bethesda, MD (NLM), National Center for Biotechnology Information (NCBI), National Institutes of Health Bethesda, MD, USA (NIH)-National Institutes of Health Bethesda, MD, USA (NIH), Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), N.Y., P.M., and E.V.K. are supported through the Intramural Research Program of the National Institutes of Health (National Library of Medicine). M.K. was supported by the l’Agence Nationale de la Recherche grant ANR-23-CE02-0022., ANR-23-CE02-0022,MIRUS,Importance des virus du plankton apparentés au herpèsvirus(2023)
المصدر: ISSN: 2161-2129.
مصطلحات موضوعية: virus evolution, Nucleocytoviricota, double jelly-roll fold, rolling circle replication, HUH superfamily endonucleases, AlphaFold, Mriyaviricetes, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology
Relation: info:eu-repo/semantics/altIdentifier/pmid/38832788; PUBMED: 38832788; PUBMEDCENTRAL: PMC11253617
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13Academic Journal
المؤلفون: Kuhn, Jens, H, Babaian, Artem, Bergner, Laura, M, Dény, Paul, Glebe, Dieter, Horie, Masayuki, Koonin, Eugene, V, Krupovic, Mart, Paraskevopoulou, Sofia, de la Peña, Marcos, Smura, Teemu, Hepojoki, Jussi
المساهمون: Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases Bethesda (NIAID-NIH), National Institutes of Health Bethesda, MD, USA (NIH)-National Institutes of Health Bethesda, MD, USA (NIH), University of Toronto, University of Glasgow, Université Sorbonne Paris Nord, Justus-Liebig-Universität Gießen = Justus Liebig University (JLU), Osaka Metropolitan University, National Center for Biotechnology Information (NCBI), National Institutes of Health Bethesda, MD, USA (NIH), Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Robert Koch Institute Berlin (RKI), Universitat Politècnica de València = Universitad Politecnica de Valencia = Polytechnic University of Valencia (UPV), Helsingin yliopisto = Helsingfors universitet = University of Helsinki, Production of this Profile, the ICTV Report, and associated resources was supported by the Microbiology Society. This work was supported in part through the Laulima Government Solutions, LLC, prime contract with the U.S. National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC, under Contract No. HHSN272201800013C.
المصدر: ISSN: 0022-1317.
مصطلحات موضوعية: deltavirus, hepatitis D virus, ICTV Report, Kolmioviridae, taxonomy, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology
Relation: info:eu-repo/semantics/altIdentifier/pmid/38421275; pasteur-04484606; https://pasteur.hal.science/pasteur-04484606; https://pasteur.hal.science/pasteur-04484606/document; https://pasteur.hal.science/pasteur-04484606/file/Kuhn2024JGV.pdf; PUBMED: 38421275
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14Academic Journal
المؤلفون: Krupovic, Mart, Kuhn, Jens, H, Fischer, Matthias, G, Koonin, Eugene, V
المساهمون: Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases Bethesda (NIAID-NIH), National Institutes of Health Bethesda, MD, USA (NIH)-National Institutes of Health Bethesda, MD, USA (NIH), Max Planck Institute for Medical Research Heidelberg, Max-Planck-Gesellschaft, National Center for Biotechnology Information (NCBI), National Institutes of Health Bethesda, MD, USA (NIH), This work was supported by a grant from l’Agence Nationale de la Recherche (ANR-23-CE02-0022) to M.K. E.V.K. is supported through the Intramural Research Program of the NIH (National Library of Medicine). This work was supported in part through a Laulima Government Solutions, Limited Liability Company (LLC), prime contract with the U.S. National Institute of Allergy and Infectious Diseases under Contract No. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services, a subcontractor of Laulima Government Solutions, LLC, under Contract No. HHSN272201800013C., ANR-23-CE02-0022,MIRUS,Importance des virus du plankton apparentés au herpèsvirus(2023)
المصدر: ISSN: 0027-8424.
مصطلحات موضوعية: adenovirus, protein-primed family B-DNA polymerase, deubiquitinylase, polintons, Virophages, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology
Relation: info:eu-repo/semantics/altIdentifier/pmid/38805295; pasteur-04597784; https://pasteur.hal.science/pasteur-04597784; https://pasteur.hal.science/pasteur-04597784/document; https://pasteur.hal.science/pasteur-04597784/file/Krupovic2024PNAS.pdf; PUBMED: 38805295
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15Academic Journal
المؤلفون: Koonin, Eugene, V, Kuhn, Jens, H, Dolja, Valerian, V, Krupovic, Mart
المساهمون: National Center for Biotechnology Information (NCBI), National Institutes of Health Bethesda, MD, USA (NIH), National Institute of Allergy and Infectious Diseases Bethesda (NIAID-NIH), Oregon State University (OSU), Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), E.V.K. is supported by the funds of the Intramural Research Program of the National Institutes of Health of the USA. V.V.D. was partially supported by the National Institutes of Health (NIH) National Library of Medicine (NLM) National Center for Biotechnology Information (NCBI) Visiting Scientist Fellowship. M.K. was supported by l’Agence Nationale de la Recherche grant ANR-21-CE11-0001-01. This work was supported in part through a Laulima Government Solutions, LLC, prime contract with the NIH National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272201800013C. J.H.K. performed this work as an employee of Tunnell Government Services (TGS), a subcontractor of Laulima Government Solutions, LLC, under Contract No. HHSN272201800013C., ANR-21-CE11-0001,ArcFus,Protéines de classe II de fusion membranaire chez les archées(2021)
المصدر: ISSN: 1751-7362.
مصطلحات موضوعية: virus taxonomy, virus evolution, virus host range, virus ecology, metagenomics, metatranscriptomics, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology
Relation: pasteur-04445471; https://pasteur.hal.science/pasteur-04445471; https://pasteur.hal.science/pasteur-04445471/document; https://pasteur.hal.science/pasteur-04445471/file/Koonin2024ISMEJ.pdf
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16Academic Journal
المؤلفون: Makarova, Kira, S, Tobiasson, Victor, Wolf, Yuri, I, Lu, Zhongyi, Liu, Yang, Zhang, Siyu, Krupovic, Mart, Li, Meng, Koonin, Eugene, V
المساهمون: National Center for Biotechnology Information (NCBI), National Institutes of Health Bethesda, MD, USA (NIH), Shenzhen University Shenzhen, Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), This work was supported by the Shenzhen Medical Research Fund (B2301005), National Natural Science Foundation of China (grant nos. 32225003, 32393970，32393971, 32000002, and 92251306), Guangdong Basic and Applied Basic Research Foundation (2023A1515011309), Guangdong Major Project of Basic and Applied Basic Research(2023B0303000017), and Shenzhen University 2035 Program for Excellent Research (2022B002). K.S.M., V.T., Y.I.W., and E.V.K. are supported by intramural funds of the US Department of Health and Human Services (National Institutes of Health, National Library of Medicine).
المصدر: ISSN: 2161-2129.
مصطلحات موضوعية: ESCRT, membrane remodeling, Asgard archaea, cell division, [SDV.BC]Life Sciences [q-bio]/Cellular Biology
Relation: info:eu-repo/semantics/altIdentifier/pmid/38380930; pasteur-04505417; https://pasteur.hal.science/pasteur-04505417; https://pasteur.hal.science/pasteur-04505417/document; https://pasteur.hal.science/pasteur-04505417/file/Makarova2024mBio.pdf; PUBMED: 38380930; PUBMEDCENTRAL: PMC10936438
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17Academic Journal
المؤلفون: Urayama, Syun-Ichi, Fukudome, Akihito, Hirai, Miho, Okumura, Tomoyo, Nishimura, Yosuke, Takaki, Yoshihiro, Kurosawa, Norio, Koonin, Eugene, V, Krupovic, Mart, Nunoura, Takuro
المساهمون: Université de Tsukuba = University of Tsukuba, Indiana University Bloomington, Indiana University System, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Kochi University, Soka University, National Center for Biotechnology Information (NCBI), National Institutes of Health Bethesda, MD, USA (NIH), Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), This study was supported by JSPS KAKENHI (Grant Nos. 15H05468 to T.O. and 20K20377 to T.N.) and by Grants-in-Aid for Scientific Research on Innovative Areas from the Ministry of Education, Culture, Science, Sports and Technology (MEXT) of Japan (Grant Nos. 22H04879 and 20H05579 to S.U., 19H05684, 16H06429, 16K21723 and 16H06437 to T.N). This research was also supported in part by Lilly Endowment, Inc., through its support for the Indiana University Pervasive Technology Institute which provided supercomputing resources for protein structure modelling, and by a grant from the Institute for Fermentation, Osaka, Japan. E.V.K. was supported by the Intramural Research Program of the US National Institutes of Health (National Library of Medicine).
المصدر: ISSN: 2058-5276.
Relation: info:eu-repo/semantics/altIdentifier/pmid/38233646; pasteur-04447423; https://pasteur.hal.science/pasteur-04447423; https://pasteur.hal.science/pasteur-04447423/document; https://pasteur.hal.science/pasteur-04447423/file/Urayama2024NatMicrobiol.pdf; PUBMED: 38233646
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18Academic Journal
المؤلفون: Duan, Changhai, Liu, Yang, Liu, Ying, Liu, Lirui, Cai, Mingwei, Zhang, Rui, Zeng, Qinglu, Koonin, Eugene, V, Krupovic, Mart, Li, Meng
المساهمون: Shenzhen University Shenzhen, Hong Kong University of Science and Technology (HKUST), Virologie des archées - Archaeal Virology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), National Center for Biotechnology Information (NCBI), National Institutes of Health Bethesda, MD, USA (NIH), National Key Research and Development Program of China (2022YFA0912200), the National Natural Science Foundation of China (32225003, 92251306, 31970105), the Innovation Team Project of Universities in Guangdong Province (No. 2020KCXTD023), the Shenzhen Science and Technology Program (JCYJ20200109105010363), and Shenzhen University 2035 Program for Excellent Research (2022B002) and Intramural Research Program of the National Insitutes of Health of the USA (National Library of Medicine) to E.V.K.
المصدر: EISSN: 2730-6151 ; ISME Communications ; https://pasteur.hal.science/pasteur-04447359 ; ISME Communications, 2024, 4 (1), pp.ycad011. ⟨10.1093/ismeco/ycad011⟩
مصطلحات موضوعية: Bathyarchaeia, virus, Type IV-B CRISPR-Cas system, Cas4 protein, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology
Relation: info:eu-repo/semantics/altIdentifier/pmid/38328448; pasteur-04447359; https://pasteur.hal.science/pasteur-04447359; https://pasteur.hal.science/pasteur-04447359/document; https://pasteur.hal.science/pasteur-04447359/file/Duan2024ISMECommun.pdf; PUBMED: 38328448; PUBMEDCENTRAL: PMC10848311
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19Academic Journal
المؤلفون: Kuhn, Jens H., Babaian, Artem, Bergner, Laura, Dény, Paul, Glebe, Dieter, Horie, Masayuki, Koonin, Eugene V., Krupovic, Mart, Paraskevopoulou, Sofia, de la Peña, Marcos, Smura, Teemu, Hepojoki, Jussi
وصف الملف: text
Relation: https://eprints.gla.ac.uk/309950/1/309950.pdf; Kuhn, J. H. et al. (2024) ICTV Virus Taxonomy Profile: Kolmioviridae 2024. Journal of General Virology , 105(2), 001963. (doi:10.1099/jgv.0.001963 ) (PMID:38421275)
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20Academic Journal
المؤلفون: Jain, Ishita, Kolesnik, Matvey, Kuznedelov, Konstantin, Minakhin, Leonid, Morozova, Natalia, Shiriaeva, Anna, Kirillov, Alexandr, Medvedeva, Sofia, Livenskyi, Alexei, Kazieva, Laura, Makarova, Kira S, Koonin, Eugene V, Borukhov, Sergei, Severinov, Konstantin, Semenova, Ekaterina
المصدر: Rowan-Virtua School of Osteopathic Medicine Faculty Scholarship
مصطلحات موضوعية: RNA, Transfer, CRISPR-Cas Systems, Anticodon, Escherichia coli, Leptotrichia, CRISPR-Associated Proteins, Bacteriophages, RNA Cleavage, Laboratory and Basic Science Research, Medical Cell Biology, Medical Molecular Biology, Medicine and Health Sciences, Microbiology, Molecular Biology, Molecular Genetics
وصف الملف: application/pdf
Relation: https://rdw.rowan.edu/som_facpub/209; https://rdw.rowan.edu/context/som_facpub/article/1206/viewcontent/tRNA_anticodon_cleavage.pdf
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