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1Academic Journal
المؤلفون: Chenxu Pan, Knut Reinert
المصدر: Genome Biology, Vol 25, Iss 1, Pp 1-18 (2024)
مصطلحات موضوعية: Filter-based pipelines, Intra-read SV detection, Population-scale long-read applications, Generative model, Extended SAM/BAM, Biology (General), QH301-705.5, Genetics, QH426-470
وصف الملف: electronic resource
Relation: https://doaj.org/toc/1474-760X
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2Academic Journal
المؤلفون: Svenja Mehringer, Enrico Seiler, Felix Droop, Mitra Darvish, René Rahn, Martin Vingron, Knut Reinert
المصدر: Genome Biology, Vol 24, Iss 1, Pp 1-25 (2023)
مصطلحات موضوعية: Approximate membership query, Sequence search, Miminizer, Alignment free analysis, Bloom filter, Metagenomics, Biology (General), QH301-705.5, Genetics, QH426-470
وصف الملف: electronic resource
Relation: https://doaj.org/toc/1474-760X
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3Academic Journal
المؤلفون: Jörg Winkler, Gianvito Urgese, Elisa Ficarra, Knut Reinert
المصدر: BMC Bioinformatics, Vol 23, Iss 1, Pp 1-22 (2022)
مصطلحات موضوعية: RNA secondary structure, Integer linear program, Bioinformatics, Structural alignment, RNA, Algorithms, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5
وصف الملف: electronic resource
Relation: https://doaj.org/toc/1471-2105
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4Academic Journal
المؤلفون: Kerstin Neubert, Eric Zuchantke, Robert Maximilian Leidenfrost, Roebbe Wuenschiers, Josephine Grützke, Burkhard Malorny, Holger Brendebach, Sascha Al Dahouk, Timo Homeier, Helmut Hotzel, Knut Reinert, Herbert Tomaso, Anne Busch
المصدر: BMC Genomics, Vol 22, Iss 1, Pp 1-21 (2021)
مصطلحات موضوعية: Francisella pathogenicity island, Insertion sequences, High-throughput sequencing, Short-read assembly, Hybrid assembly, Ion Torrent’s ion S5, Biotechnology, TP248.13-248.65, Genetics, QH426-470
وصف الملف: electronic resource
Relation: https://doaj.org/toc/1471-2164
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5Academic Journal
المصدر: BMC Biotechnology, Vol 19, Iss 1, Pp 1-7 (2019)
مصطلحات موضوعية: CRISPR-Cas9, Off-target detection, Variants, Genome editing, Biotechnology, TP248.13-248.65
وصف الملف: electronic resource
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6Academic Journal
المؤلفون: Enrico Seiler, Svenja Mehringer, Mitra Darvish, Etienne Turc, Knut Reinert
المصدر: iScience, Vol 24, Iss 7, Pp 102782- (2021)
مصطلحات موضوعية: genetics, bioinformatics, high-performance computing in bioinformatics, Science
وصف الملف: electronic resource
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7Academic Journal
المؤلفون: M-Hossein Moeinzadeh, Jun Yang, Evgeny Muzychenko, Giuseppe Gallone, David Heller, Knut Reinert, Stefan Haas, Martin Vingron
المصدر: PLoS Computational Biology, Vol 16, Iss 5, p e1007843 (2020)
مصطلحات موضوعية: Biology (General), QH301-705.5
وصف الملف: electronic resource
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8Academic Journal
المؤلفون: Natalie Witt, Sandro Andreotti, Anne Busch, Kerstin Neubert, Knut Reinert, Herbert Tomaso, David Meierhofer
المصدر: Frontiers in Microbiology, Vol 11 (2020)
مصطلحات موضوعية: Francisella tularensis, high-resolution tandem mass spectrometry proteotyping, proteome profiling, detection of pathogens, phylogenetic analysis, Microbiology, QR1-502
وصف الملف: electronic resource
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9Academic Journal
المؤلفون: Kerstin Neubert, Eric Zuchantke, Robert Maximilian Leidenfrost, Röbbe Wünschiers, Josephine Grützke, Burkhard Malorny, Holger Brendebach, Sascha Al Dahouk, Timo Homeier, Helmut Hotzel, Knut Reinert, Herbert Tomaso, Anne Busch
المصدر: BMC Genomics, Vol 22, Iss 1, Pp 1-1 (2021)
مصطلحات موضوعية: Biotechnology, TP248.13-248.65, Genetics, QH426-470
وصف الملف: electronic resource
Relation: https://doaj.org/toc/1471-2164
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10Academic Journal
المؤلفون: Sandeep Keshavan, Fernando Torres Andón, Audrey Gallud, Wei Chen, Knut Reinert, Lang Tran, Bengt Fadeel
المصدر: Nanomaterials, Vol 11, Iss 4, p 883 (2021)
مصطلحات موضوعية: multi-walled carbon nanotubes, nanoparticles, chemokines, macrophages, transcriptomics, Chemistry, QD1-999
وصف الملف: electronic resource
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11Academic Journal
المؤلفون: Temesgen Hailemariam Dadi, Bernhard Y. Renard, Lothar H. Wieler, Torsten Semmler, Knut Reinert
المصدر: PeerJ, Vol 5, p e3138 (2017)
مصطلحات موضوعية: Metagenomics, Microbial communities, Microorganisms, Taxonomic profiling, NGS data, Microbiology, Medicine, Biology (General), QH301-705.5
وصف الملف: electronic resource
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12Academic Journal
المؤلفون: Robert Preissner, Janusz M. Bujnicki, Thomas Steinke, Peter Moor, Knut Reinert, Kristian Rother, Raphael André Bauer
المصدر: Algorithms, Vol 2, Iss 2, Pp 692-709 (2009)
مصطلحات موضوعية: Structural alignment, protein, RNA, hash table, n-gram, torsion angles, Industrial engineering. Management engineering, T55.4-60.8, Electronic computers. Computer science, QA75.5-76.95
وصف الملف: electronic resource
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13Academic Journal
المؤلفون: Stephan Aiche, Knut Reinert, Christof Schütte, Diana Hildebrand, Hartmut Schlüter, Tim O F Conrad
المصدر: PLoS ONE, Vol 7, Iss 7, p e40656 (2012)
وصف الملف: electronic resource
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14Academic Journal
المؤلفون: Daniela Hüser, Andreas Gogol-Döring, Timo Lutter, Stefan Weger, Kerstin Winter, Eva-Maria Hammer, Toni Cathomen, Knut Reinert, Regine Heilbronn
المصدر: PLoS Pathogens, Vol 6, Iss 7, p e1000985 (2010)
مصطلحات موضوعية: Immunologic diseases. Allergy, RC581-607, Biology (General), QH301-705.5
وصف الملف: electronic resource
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15
المؤلفون: Yuwei Wang, Bin Lian, Haohui Zhang, Yuanke Zhong, Jie He, Fashuai Wu, Knut Reinert, Xuequn Shang, Hui Yang, Jialu Hu
مصطلحات موضوعية: Statistics and Probability, Computational Mathematics, Computational Theory and Mathematics, cell development, cellular heterogeneity, 500 Naturwissenschaften und Mathematik::570 Biowissenschaften, Biologie::570 Biowissenschaften, Biologie, Molecular Biology, Biochemistry, Computer Science Applications, diseases
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16
المؤلفون: Christoph Koch, Matthias Weidlich, Volker Markl, Lars Grunske, Dagmar Kainmüller, Alexander Reinefeld, Peter Eisert, Ulf Leser, Florian Schintke, Knut Reinert, Timo Kehrer, Odej Kao, Tilmann Rabl, Nicole Schweikardt, Henning Meyerhenke, Patrick Hostert, Birte Kehr, Claudia Draxl, Marcus Hilbrich, Björn Scheuermann, Kerstin Ritter
المصدر: Datenbank-Spektrum
مصطلحات موضوعية: Structure (mathematical logic), Big data processing, Computer science, Emerging technologies, Community, Distributed systems, Research software engineering, Data science, Sketch, Software portability, Workflow, Scientific workflows, Dependability, Adaptation (computer science), Research center
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17
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18
المؤلفون: Knut Reinert, Temesgen Hailemariam Dadi, Jürgen Zentek, Wilfried Vahjen, Laura Pieper, Andre Franke, Robert Pieper
المصدر: The ISME Journal
مصطلحات موضوعية: 600 Technik, Medizin, angewandte Wissenschaften::630 Landwirtschaft::630 Landwirtschaft und verwandte Bereiche, Colon, Swine, chemistry.chemical_element, Zinc, Weaning, Biology, Carbohydrate metabolism, in-vitro, Microbiology, Article, Applied microbiology, 03 medical and health sciences, Microbial ecology, Metallothionein, Animals, Microbiome, Food science, Ecology, Evolution, Behavior and Systematics, 030304 developmental biology, 0303 health sciences, 0402 animal and dairy science, Drug Resistance, Microbial, 04 agricultural and veterinary sciences, organic forms, bacterial communities, metallothionein, 040201 dairy & animal science, Animal Feed, Bioavailability, Resistome, Anti-Bacterial Agents, Diet, chemistry, Metagenomics, weaning pigs, oxide, bioavailability, accumulation
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19
المؤلفون: Fernando Meyer, Adrian Fritz, Zhi-Luo Deng, David Koslicki, Till Robin Lesker, Alexey Gurevich, Gary Robertson, Mohammed Alser, Dmitry Antipov, Francesco Beghini, Denis Bertrand, Jaqueline J. Brito, C. Titus Brown, Jan Buchmann, Aydin Buluç, Bo Chen, Rayan Chikhi, Philip T. L. C. Clausen, Alexandru Cristian, Piotr Wojciech Dabrowski, Aaron E. Darling, Rob Egan, Eleazar Eskin, Evangelos Georganas, Eugene Goltsman, Melissa A. Gray, Lars Hestbjerg Hansen, Steven Hofmeyr, Pingqin Huang, Luiz Irber, Huijue Jia, Tue Sparholt Jørgensen, Silas D. Kieser, Terje Klemetsen, Axel Kola, Mikhail Kolmogorov, Anton Korobeynikov, Jason Kwan, Nathan LaPierre, Claire Lemaitre, Chenhao Li, Antoine Limasset, Fabio Malcher-Miranda, Serghei Mangul, Vanessa R. Marcelino, Camille Marchet, Pierre Marijon, Dmitry Meleshko, Daniel R. Mende, Alessio Milanese, Niranjan Nagarajan, Jakob Nissen, Sergey Nurk, Leonid Oliker, Lucas Paoli, Pierre Peterlongo, Vitor C. Piro, Jacob S. Porter, Simon Rasmussen, Evan R. Rees, Knut Reinert, Bernhard Renard, Espen Mikal Robertsen, Gail L. Rosen, Hans-Joachim Ruscheweyh, Varuni Sarwal, Nicola Segata, Enrico Seiler, Lizhen Shi, Fengzhu Sun, Shinichi Sunagawa, Søren Johannes Sørensen, Ashleigh Thomas, Chengxuan Tong, Mirko Trajkovski, Julien Tremblay, Gherman Uritskiy, Riccardo Vicedomini, Zhengyang Wang, Ziye Wang, Zhong Wang, Andrew Warren, Nils Peder Willassen, Katherine Yelick, Ronghui You, Georg Zeller, Zhengqiao Zhao, Shanfeng Zhu, Jie Zhu, Ruben Garrido-Oter, Petra Gastmeier, Stephane Hacquard, Susanne Häußler, Ariane Khaledi, Friederike Maechler, Fantin Mesny, Simona Radutoiu, Paul Schulze-Lefert, Nathiana Smit, Till Strowig, Andreas Bremges, Alexander Sczyrba, Alice Carolyn McHardy
المساهمون: Braunschweig Integrated Centre of Systems Biology [Braunschweig] (BRICS), Technische Universität Braunschweig = Technical University of Braunschweig [Braunschweig]-Helmholtz Centre for Infection Research (HZI), Pennsylvania State University (Penn State), Penn State System, German Center for Infection Research - partner site Hannover-Braunschweig (DZIF), Saint Petersburg State University (SPBU), Department of Information Technology and Electrical Engineering [Zürich] (D-ITET), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), Center for Algorithmic Biotechnology [Saint Petersburg], Institute of Translational Biomedicine [Saint-Petersburg], Saint Petersburg University (SPBU)-Saint Petersburg University (SPBU), Centre for Integrative Biology (CIBIO), University of Trento (CIBIO), University of Trento [Trento], Genome Institute of Singapore (GIS), University of Southern California (USC), University of California [Davis] (UC Davis), University of California (UC), Heinrich Heine Universität Düsseldorf = Heinrich Heine University [Düsseldorf], Lawrence Berkeley National Laboratory [Berkeley] (LBNL), Institut Pasteur [Paris] (IP), National Food Institute [Lyngby] (Forside), Drexel University, Robert Koch Institute [Berlin] (RKI), University of Technology Sydney (UTS), DOE Joint Genome Institute [Walnut Creek], University of California [Los Angeles] (UCLA), Intel Corporation [Santa Clara], Intel Corporation [USA], Department of Plant and Environmental Sciences [Frederiksberg], University of Copenhagen = Københavns Universitet (UCPH), Fudan University [Shanghai], Beijing Genomics Institute [Shenzhen] (BGI), Novo Nordisk Foundation Center for Biosustainability, Danmarks Tekniske Universitet = Technical University of Denmark (DTU), Université de Genève = University of Geneva (UNIGE), The Arctic University of Norway [Tromsø, Norway] (UiT), Charité - UniversitätsMedizin = Charité - University Hospital [Berlin], University of California [San Diego] (UC San Diego), University of Wisconsin-Madison, Scalable, Optimized and Parallel Algorithms for Genomics (GenScale), Inria Rennes – Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-GESTION DES DONNÉES ET DE LA CONNAISSANCE (IRISA-D7), Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA), Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université de Bretagne Sud (UBS)-École normale supérieure - Rennes (ENS Rennes)-Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Centre National de la Recherche Scientifique (CNRS)-IMT Atlantique (IMT Atlantique), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université de Bretagne Sud (UBS)-École normale supérieure - Rennes (ENS Rennes)-CentraleSupélec-Centre National de la Recherche Scientifique (CNRS)-IMT Atlantique (IMT Atlantique), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT), Centre National de la Recherche Scientifique (CNRS), Centre de Recherche en Informatique, Signal et Automatique de Lille - UMR 9189 (CRIStAL), Centrale Lille-Université de Lille-Centre National de la Recherche Scientifique (CNRS), Hasso Plattner Institute [Potsdam, Germany], The University of Sydney, Inria Lille - Nord Europe, Institut National de Recherche en Informatique et en Automatique (Inria), Amsterdam UMC - Amsterdam University Medical Center, Structural and Computational Biology, European Molecular Biology Laboratory [Heidelberg] (EMBL), DTU Electrical Engineering [Lyngby], National Institutes of Health [Bethesda] (NIH), Department of Biology [ETH Zürich] (D-BIOL), University of Virginia, IT University of Copenhagen (ITU), Freie Universität Berlin, University of Potsdam = Universität Potsdam, Florida International University [Miami] (FIU), National Research Council of Canada (NRC), Phase Genomics [Seattle], Max Planck Institute for Plant Breeding Research (MPIPZ), Helmholtz Centre for Infection Research (HZI), Aarhus University [Aarhus], Center for Biotechnology (CeBiTec), Universität Bielefeld = Bielefeld University, Open access funding provided by Helmholtz-Zentrum für Infektionsforschung GmbH (HZI), ANR-16-CONV-0005,INCEPTION,Institut Convergences pour l'étude de l'Emergence des Pathologies au Travers des Individus et des populatiONs(2016), ANR-19-P3IA-0001,PRAIRIE,PaRis Artificial Intelligence Research InstitutE(2019), Medical Microbiology and Infection Prevention
المصدر: Nature Methods
Meyer, F, Fritz, A, Deng, Z L, Koslicki, D, Lesker, T R, Gurevich, A, Robertson, G, Alser, M, Antipov, D, Beghini, F, Bertrand, D, Brito, J J, Brown, C T, Buchmann, J, Buluç, A, Chen, B, Chikhi, R, Clausen, P T L C, Cristian, A, Dabrowski, P W, Darling, A E, Egan, R, Eskin, E, Georganas, E, Goltsman, E, Gray, M A, Hansen, L H, Hofmeyr, S, Huang, P, Irber, L, Jia, H, Jørgensen, T S, Kieser, S D, Klemetsen, T, Kola, A, Kolmogorov, M, Korobeynikov, A, Kwan, J, LaPierre, N, Lemaitre, C, Li, C, Limasset, A, Malcher-Miranda, F, Mangul, S, Marcelino, V R, Marchet, C, Marijon, P, Meleshko, D, Mende, D R, Milanese, A, Nagarajan, N, Nissen, J, Nurk, S, Oliker, L, Paoli, L, Peterlongo, P, Piro, V C, Porter, J S, Rasmussen, S, Rees, E R, Reinert, K, Renard, B, Robertsen, E M, Rosen, G L, Ruscheweyh, H J, Sarwal, V, Segata, N, Seiler, E, Shi, L, Sun, F, Sunagawa, S, Sørensen, S J, Thomas, A, Tong, C, Trajkovski, M, Tremblay, J, Uritskiy, G, Vicedomini, R, Wang, Z, Wang, Z, Wang, Z, Warren, A, Willassen, N P, Yelick, K, You, R, Zeller, G, Zhao, Z, Zhu, S, Zhu, J, Garrido-Oter, R, Gastmeier, P, Hacquard, S, Häußler, S, Khaledi, A, Maechler, F, Mesny, F, Radutoiu, S, Schulze-Lefert, P, Smit, N, Strowig, T, Bremges, A, Sczyrba, A & McHardy, A C 2022, ' Critical Assessment of Metagenome Interpretation : the second round of challenges ', Nature Methods, vol. 19, no. 4, pp. 429-440 . https://doi.org/10.1038/s41592-022-01431-4
Nature Methods, 2022, 19 (4), pp.429-440. ⟨10.1038/s41592-022-01431-4⟩
Nature methods, 19(4), 429-440. Nature Publishing Group
Meyer, F, Fritz, A, Deng, Z-L, Koslicki, D, Lesker, T R, Gurevich, A, Robertson, G, Alser, M, Antipov, D, Beghini, F, Bertrand, D, Brito, J J, Brown, C T, Buchmann, J, Buluç, A, Chen, B, Chikhi, R, Clausen, P T L C, Cristian, A, Dabrowski, P W, Darling, A E, Egan, R, Eskin, E, Georganas, E, Goltsman, E, Gray, M A, Hansen, L H, Hofmeyr, S, Huang, P, Irber, L, Jia, H, Jørgensen, T S, Kieser, S D, Klemetsen, T, Kola, A, Kolmogorov, M, Korobeynikov, A, Kwan, J, LaPierre, N, Lemaitre, C, Li, C, Limasset, A, Malcher-Miranda, F, Mangul, S, Marcelino, V R, Marchet, C, Marijon, P, Meleshko, D, Mende, D R, Milanese, A, Nagarajan, N, Nissen, J, Nurk, S, Oliker, L, Paoli, L, Peterlongo, P, Piro, V C, Porter, J S, Rasmussen, S, Rees, E R, Reinert, K, Renard, B, Robertsen, E M, Rosen, G L, Ruscheweyh, H-J, Sarwal, V, Segata, N, Seiler, E, Shi, L, Sun, F, Sunagawa, S, Sørensen, S J, Thomas, A, Tong, C, Trajkovski, M, Tremblay, J, Uritskiy, G, Vicedomini, R, Wang, Z, Wang, Z, Wang, Z, Warren, A, Willassen, N P, Yelick, K, You, R, Zeller, G, Zhao, Z, Zhu, S, Zhu, J, Garrido-Oter, R, Gastmeier, P, Hacquard, S, Häußler, S, Khaledi, A, Maechler, F, Mesny, F, Radutoiu, S, Schulze-Lefert, P, Smit, N, Strowig, T, Bremges, A, Sczyrba, A & McHardy, A C 2022, ' Critical Assessment of Metagenome Interpretation : the second round of challenges ', Nature Methods, vol. 19, no. 4, pp. 429-440 . https://doi.org/10.1038/s41592-022-01431-4
Nature Methods, 19 (8)مصطلحات موضوعية: 06 Biological Sciences, 10 Technology, 11 Medical and Health Sciences, Reproducibility of Results, Cell Biology, DNA, Sequence Analysis, DNA, Biochemistry, Archaea, Software, Metagenome, Metagenomics, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], Molecular Biology, Sequence Analysis, Biotechnology, Developmental Biology
وصف الملف: Print-Electronic; application/pdf; application/application/pdf
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20
المؤلفون: Marius Knaust, Enrico Seiler, Knut Reinert, Thomas Steinke
المصدر: Proceedings of the 2022 ACM/SIGDA International Symposium on Field-Programmable Gate Arrays.