المؤلفون: Meyer, Fernando, Fritz, Adrian, Deng, Zhi-Luo, Koslicki, David, Lesker, Till Robin, Gurevich, Alexey, Robertson, Gary, Alser, Mohammed, Antipov, Dmitry, Beghini, Francesco, Bertrand, Denis, Brito, Jaqueline J, Brown, C Titus, Buchmann, Jan, Buluç, Aydin, Chen, Bo, Chikhi, Rayan, Clausen, Philip TLC, Cristian, Alexandru, Dabrowski, Piotr Wojciech, Darling, Aaron E, Egan, Rob, Eskin, Eleazar, Georganas, Evangelos, Goltsman, Eugene, Gray, Melissa A, Hansen, Lars Hestbjerg, Hofmeyr, Steven, Huang, Pingqin, Irber, Luiz, Jia, Huijue, Jørgensen, Tue Sparholt, Kieser, Silas D, Klemetsen, Terje, Kola, Axel, Kolmogorov, Mikhail, Korobeynikov, Anton, Kwan, Jason, LaPierre, Nathan, Lemaitre, Claire, Li, Chenhao, Limasset, Antoine, Malcher-Miranda, Fabio, Mangul, Serghei, Marcelino, Vanessa R, Marchet, Camille, Marijon, Pierre, Meleshko, Dmitry, Mende, Daniel R, Milanese, Alessio, Nagarajan, Niranjan, Nissen, Jakob, Nurk, Sergey, Oliker, Leonid, Paoli, Lucas, Peterlongo, Pierre, Piro, Vitor C, Porter, Jacob S, Rasmussen, Simon, Rees, Evan R, Reinert, Knut, Renard, Bernhard, Robertsen, Espen Mikal, Rosen, Gail L, Ruscheweyh, Hans-Joachim, Sarwal, Varuni, Segata, Nicola, Seiler, Enrico, Shi, Lizhen, Sun, Fengzhu, Sunagawa, Shinichi, Sørensen, Søren Johannes, Thomas, Ashleigh, Tong, Chengxuan, Trajkovski, Mirko, Tremblay, Julien, Uritskiy, Gherman, Vicedomini, Riccardo, Wang, Zhengyang, Wang, Ziye, Wang, Zhong, Warren, Andrew, Willassen, Nils Peder, Yelick, Katherine, You, Ronghui, Zeller, Georg, Zhao, Zhengqiao, Zhu, Shanfeng, Zhu, Jie, Garrido-Oter, Ruben, Gastmeier, Petra, Hacquard, Stephane, Häußler, Susanne, Khaledi, Ariane, Maechler, Friederike, Mesny, Fantin, Radutoiu, Simona, Schulze-Lefert, Paul, Smit, Nathiana, Strowig, Till

المصدر: Nature Methods. 19(4)

مصطلحات موضوعية: Biological Sciences, Bioinformatics and Computational Biology, Networking and Information Technology R&D (NITRD), Archaea, Metagenome, Metagenomics, Reproducibility of Results, Sequence Analysis, DNA, Software, Technology, Medical and Health Sciences, Developmental Biology, Biological sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4wf2589r
https://escholarship.org/content/qt4wf2589r/qt4wf2589r.pdf

المؤلفون: Benrahla, Djamal, Eddine, Mohan, Shruti, Trickovic, Matija, Castelli, Florence, Anne, Alloul, Ghida, Sobngwi, Arielle, Abdiche, Rosa, Kieser, Silas, Demontant, Vanessa, Trawinski, Elisabeth, Chollet, Céline, Rodriguez, Christophe, Kitagishi, Hiroaki, Fenaille, François, Trajkovski, Mirko, Motterlini, Roberto, Foresti, Roberta

المساهمون: Institut Mondor de Recherche Biomédicale (IMRB), Institut National de la Santé et de la Recherche Médicale (INSERM)-IFR10-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12), Université de Genève = University of Geneva (UNIGE), Université Paris-Saclay, Médicaments et Technologies pour la Santé (MTS), Université Paris-Saclay-Institut des Sciences du Vivant Frédéric JOLIOT (JOLIOT), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), MetaboHUB, IMRB - VHC/"Viruses-Hepatology-Cancers" Créteil (U955 Inserm - UPEC), Institut National de la Santé et de la Recherche Médicale (INSERM)-IFR10-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Institut National de la Santé et de la Recherche Médicale (INSERM)-IFR10-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12), Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12), Hôpital Henri Mondor, IMRB - PROTECT/"Pharmacologie et Technologies pour les Maladies Cardiovasculaires" Créteil (U955 Inserm - UPEC), Doshisha University Kyoto, ANR-18-CE18-0032, ANR-15-RHUS-0003,CARMMA,Role de la sénescence du tissu adipeux dans les co-morbidités des pathologies métaboliques(2015), ANR-23-CE14-0080,CO-BACT,Analyse intégrative des interactions monoxyde de carbone-microbiote dans l'obésité(2023), European Project: 815962,Healthybiota

المصدر: ISSN: 2213-2317 ; Redox Biology ; https://hal.science/hal-04651766 ; Redox Biology, 2024, 72, pp.103153. ⟨10.1016/j.redox.2024.103153⟩ ; https://www.sciencedirect.com/science/article/pii/S2213231724001290?via%3Dihub.

مصطلحات موضوعية: Carbon monoxide, Carbon monoxide-releasing molecules (CORMs), Obesity, Adipocytes, Macrophages, [SDV]Life Sciences [q-bio]

Relation: info:eu-repo/semantics/altIdentifier/pmid/38608580; info:eu-repo/grantAgreement//815962/EU/Microbiota-host interactions for integrative metabolic health reprogramming/Healthybiota; PUBMED: 38608580; PUBMEDCENTRAL: PMC11025006; WOS: 001235185200001

الاتاحة: https://hal.science/hal-04651766
https://hal.science/hal-04651766v1/document
https://hal.science/hal-04651766v1/file/Benrahla%20D%20Redox%20Biology%202024.pdf
https://doi.org/10.1016/j.redox.2024.103153

المؤلفون: Mostacci, Nadja, Wüthrich, Tsering Monika, Siegwald, Léa, Kieser, Silas, Steinberg, Ruth, Sakwinska, Olga, Latzin, Philipp, Korten, Insa, Hilty, Markus

المصدر: Mostacci, Nadja; Wüthrich, Tsering Monika; Siegwald, Léa; Kieser, Silas; Steinberg, Ruth; Sakwinska, Olga; Latzin, Philipp; Korten, Insa; Hilty, Markus (2023). Informed interpretation of metagenomic data by StrainPhlAn enables strain retention analyses of the upper airway microbiome. mSystems, 8(6), e0072423. American Society for Microbiology 10.1128/msystems.00724-23

مصطلحات موضوعية: 570 Life sciences, biology, 610 Medicine & health

وصف الملف: application/pdf

Relation: https://boris.unibe.ch/188529/

الاتاحة: https://boris.unibe.ch/188529/1/mostacci-et-al-2023-informed-interpretation-of-metagenomic-data-by-strainphlan-enables-strain-retention-analyses-of-the.pdf
https://boris.unibe.ch/188529/

المؤلفون: Sinibaldi, Silvio, Rettberg, Petra, Olsson-Francis, Karen, Moissl-Eichinger, Christine, Mahnert, Alexander, Macey, Michael, Kieser, Silas, Gil, Laia Closa, Dore, Joel, Daniel Hader, John, Lindner, Robert, Villar, Paloma, Ortega Ugalde, Sandra, Lamaze, Brigitte, Gaubert, François, Stoll, Luca

مصطلحات موضوعية: Strahlenbiologie

Relation: Sinibaldi, Silvio und Rettberg, Petra und Olsson-Francis, Karen und Moissl-Eichinger, Christine und Mahnert, Alexander und Macey, Michael und Kieser, Silas und Gil, Laia Closa und Dore, Joel und Daniel Hader, John und Lindner, Robert und Villar, Paloma und Ortega Ugalde, Sandra und Lamaze, Brigitte und Gaubert, François und Stoll, Luca (2024) PLANETARY PROTECTION AT ESA: FUTURE PLANS AND CONSIDERATIONS. COSPAR 2024 45th Scientific Assembly, 2024-07-13 - 2024-07-21, Bexco, Busan, Korea.

الاتاحة: https://elib.dlr.de/205609/

المؤلفون: Kieser, Silas, Zdobnov, Evgeny, Trajkovski, Mirko

المصدر: ISSN: 1553-734X ; PLoS computational biology, vol. 18, no. 3 (2022) e1009947.

مصطلحات موضوعية: info:eu-repo/classification/ddc/612, info:eu-repo/classification/ddc/590, info:eu-repo/classification/ddc/576.5

Relation: info:eu-repo/semantics/altIdentifier/pmid/35259160; info:eu-repo/grantAgreement/EC/H2020/815962/EU/Microbiota-host interactions for integrative metabolic health reprogramming/Healthybiota; https://archive-ouverte.unige.ch/unige:159654; unige:159654

الاتاحة: https://archive-ouverte.unige.ch/unige:159654

المؤلفون: Kieser, Silas, Brown, Joseph, Zdobnov, Evgeny, Trajkovski, Mirko, McCue, Lee Ann

المصدر: ISSN: 1471-2105 ; BMC Bioinformatics, vol. 21, no. 1 (2020) 257.

مصطلحات موضوعية: info:eu-repo/classification/ddc/576.5, info:eu-repo/classification/ddc/590, info:eu-repo/classification/ddc/612

Relation: info:eu-repo/semantics/altIdentifier/pmid/32571209; https://archive-ouverte.unige.ch/unige:139347; unige:139347

الاتاحة: https://archive-ouverte.unige.ch/unige:139347

المؤلفون: Chevalier, Claire, Kieser, Silas, Çolakoğlu, Melis, Hadadi, Noushin, Brun, Julia, Rigo, Dorothée, Suárez-Zamorano, Nicolas, Spiljar, Martina, Fabbiano, Salvatore, Busse, Björn, Ivanišević, Julijana, Macpherson, Andrew, Bonnet, Nicolas, Trajkovski, Mirko

المساهمون: European Research Council

المصدر: Cell Metabolism ; volume 32, issue 4, page 575-590.e7 ; ISSN 1550-4131

الاتاحة: http://dx.doi.org/10.1016/j.cmet.2020.08.012
https://api.elsevier.com/content/article/PII:S1550413120304253?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1550413120304253?httpAccept=text/plain

المؤلفون: Fabbiano, Salvatore, Suarez Zamorano, Nicolas, Chevalier, Claire, Lazarevic, Vladimir, Kieser, Silas, Rigo, Dorothée, Leo, Stefano, Veyrat-Durebex, Christelle, Gaia, Nadia, Maresca, Marcello, Merkler, Doron, Gomez de Agüero, Mercedes, Macpherson, Andrew, Schrenzel, Jacques, Trajkovski, Mirko

المصدر: ISSN: 1550-4131 ; Cell Metabolism, vol. 28, no. 6 (2018) p. 907-921.e7.

مصطلحات موضوعية: info:eu-repo/classification/ddc/612, info:eu-repo/classification/ddc/616.07

Relation: info:eu-repo/semantics/altIdentifier/pmid/30174308; info:eu-repo/semantics/dataset/url/https://www.ncbi.nlm.nih.gov/bioproject/PRJNA480387/; https://archive-ouverte.unige.ch/unige:108173; unige:108173

الاتاحة: https://archive-ouverte.unige.ch/unige:108173

المؤلفون: Kieser, Silas, Sarker, Shafiqul A., Sakwinska, Olga, Foata, Francis, Sultana, Shamima, Khan, Zeenat, Islam, Shoheb, Porta, Nadine, Combremont, Séverine, Betrisey, Bertrand, Fournier, Coralie, Charpagne, Aline, Descombes, Patrick, Mercenier, Annick, Berger, Bernard, Brüssow, Harald

المصدر: Environmental Microbiology ; volume 20, issue 6, page 2256-2269 ; ISSN 1462-2912 1462-2920

الاتاحة: http://dx.doi.org/10.1111/1462-2920.14274
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2F1462-2920.14274
https://onlinelibrary.wiley.com/doi/pdf/10.1111/1462-2920.14274
https://onlinelibrary.wiley.com/doi/full-xml/10.1111/1462-2920.14274

المؤلفون: Kieser, Silas, Sarker, Shafiqul A., Berger, Bernard, Sultana, Shamima, Chisti, Mohammod J., Islam, Shoeb B., Foata, Francis, Porta, Nadine, Betrisey, Bertrand, Fournier, Coralie, Descombes, Patrick, Mercenier, Annick, Sakwinska, Olga, Brüssow, Harald

المصدر: Cellular and Molecular Gastroenterology and Hepatology ; volume 5, issue 3, page 458-460.e6 ; ISSN 2352-345X

الاتاحة: http://dx.doi.org/10.1016/j.jcmgh.2017.11.014
https://api.elsevier.com/content/article/PII:S2352345X17301753?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2352345X17301753?httpAccept=text/plain

المؤلفون: Pattaroni, Céline, Watzenboeck, Martin L., Schneidegger, Sabrina, Kieser, Silas, Wong, Nicholas C., Bernasconi, Eric, Pernot, Julie, Mercier, Louis, Knapp, Sylvia, Nicod, Laurent P., Marsland, Colin P., Roth-Kleiner, Matthias, Marsland, Benjamin J.

المساهمون: Boehringer Ingelheim Fonds, Allergiestiftung Ulrich Müller-Gierok

المصدر: Cell Host & Microbe ; volume 24, issue 6, page 857-865.e4 ; ISSN 1931-3128

الاتاحة: http://dx.doi.org/10.1016/j.chom.2018.10.019
https://api.elsevier.com/content/article/PII:S1931312818305572?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1931312818305572?httpAccept=text/plain

المؤلفون: Meyer, Fernando, Fritz, Adrian, Deng, Zhi-Luo, Koslicki, David, Lesker, Till Robin, Gurevich, Alexey, Robertson, Gary, Alser, Mohammed, Antipov, Dmitry, Beghini, Francesco, Bertrand, Denis, Brito, Jaqueline J., Brown, C. Titus, Buchmann, Jan, Buluç, Aydin, Chen, Bo, Chikhi, Rayan, Clausen, Philip T.L.C., Cristian, Alexandru, Dabrowski, Piotr Wojciech, Darling, Aaron E., Egan, Rob, Eskin, Eleazar, Georganas, Evangelos, Goltsman, Eugene, Gray, Melissa A., Hansen, Lars Hestbjerg, Hofmeyr, Steven, Huang, Pingqin, Irber, Luiz, Jia, Huijue, Jørgensen, Tue Sparholt, Kieser, Silas D., Klemetsen, Terje, Kola, Axel, Kolmogorov, Mikhail, Korobeynikov, Anton, Kwan, Jason, LaPierre, Nathan, Lemaitre, Claire, Li, Chenhao, Limasset, Antoine, Malcher-Miranda, Fabio, Mangul, Serghei, Marcelino, Vanessa R., Marchet, Camille, Marijon, Pierre, Meleshko, Dmitry, Mende, Daniel R., Milanese, Alessio, Nagarajan, Niranjan, Nissen, Jakob, Nurk, Sergey, Oliker, Leonid, Paoli, Lucas, Peterlongo, Pierre, Piro, Vitor C., Porter, Jacob S., Rasmussen, Simon, Rees, Evan R., Reinert, Knut, Renard, Bernhard, Robertsen, Espen Mikal, Rosen, Gail L., Ruscheweyh, Hans-Joachim, Sarwal, Varuni, Segata, Nicola, Seiler, Enrico, Shi, Lizhen, Sun, Fengzhu, Sunagawa, Shinichi, Sørensen, Søren Johannes, Thomas, Ashleigh, Tong, Chengxuan, Trajkovski, Mirko, Tremblay, Julien, Uritskiy, Gherman, Vicedomini, Riccardo, Wang, Zhengyang, Wang, Ziye, Wang, Zhong, Warren, Andrew, Willassen, Nils Peder, Yelick, Katherine, You, Ronghui, Zeller, Georg, Zhao, Zhengqiao, Zhu, Shanfeng, Zhu, Jie, Garrido-Oter, Ruben, Gastmeier, Petra, Hacquard, Stephane, Häußler, Susanne, Khaledi, Ariane, Maechler, Friederike, Mesny, Fantin, Radutoiu, Simona, Schulze-Lefert, Paul, Smit, Nathiana, Strowig, Till, Bremges, Andreas, Sczyrba, Alexander, McHardy, Alice Carolyn

المصدر: Meyer , F , Fritz , A , Deng , Z-L , Koslicki , D , Lesker , T R , Gurevich , A , Robertson , G , Alser , M , Antipov , D , Beghini , F , Bertrand , D , Brito , J J , Brown , C T , Buchmann , J , Buluç , A , Chen , B , Chikhi , R , Clausen , P T L C , Cristian , A , Dabrowski , P W , Darling , A E , Egan , R , Eskin , E , Georganas , E , Goltsman , E , Gray , M A , Hansen , L H , Hofmeyr , S , Huang , P , Irber , L , Jia , H , Jørgensen , T S , Kieser , S D , Klemetsen , T , Kola , A , Kolmogorov , M , Korobeynikov , A , Kwan , J , LaPierre , N , Lemaitre , C , Li , C , Limasset , A , Malcher-Miranda , F , Mangul , S , Marcelino , V R , Marchet , C , Marijon , P , Meleshko , D , Mende , D R , Milanese , A , Nagarajan , N , Nissen , J , Nurk , S , Oliker , L , Paoli , L , Peterlongo , P , Piro , V C , Porter , J S , Rasmussen , S , Rees , E R , Reinert , K , Renard , B , Robertsen , E M , Rosen , G L , Ruscheweyh , H-J , Sarwal , V , Segata , N , Seiler , E , Shi , L , Sun , F , Sunagawa , S , Sørensen , S J , Thomas , A , Tong , C , Trajkovski , M , Tremblay , J , Uritskiy , G , Vicedomini , R , Wang , Z , Wang , Z , Wang , Z , Warren , A , Willassen , N P , Yelick , K , You , R , Zeller , G , Zhao , Z , Zhu , S , Zhu , J , Garrido-Oter , R , Gastmeier , P , Hacquard , S , Häußler , S , Khaledi , A , Maechler , F , Mesny , F , Radutoiu , S , Schulze-Lefert , P , Smit , N , Strowig , T , Bremges , A , Sczyrba , A & McHardy , A C 2022 , ' Critical Assessment of Metagenome Interpretation : the second round of challenges ' , Nature Methods , vol. 19 , no. 4 , pp. 429-440 .

مصطلحات الفهرس: article

URL: https://orbit.dtu.dk/en/publications/361a7860-954b-4152-ab61-1ab9ccd4284e
https://doi.org/10.1038/s41592-022-01431-4
https://backend.orbit.dtu.dk/ws/files/274793546/s41592_022_01431_4.pdf

المؤلفون: Trickovic Matija, Kieser Silas

Relation: https://doi.org/10.5281/zenodo.6322940; https://doi.org/10.5281/zenodo.6322941; oai:zenodo.org:6322941

الاتاحة: https://doi.org/10.5281/zenodo.6322941

المؤلفون: Kieser, Silas, Zdobnov, Evgeny M., Trajkovski, Mirko

المصدر: PLoS computational biology, Vol. 18, No 3 (2022) P. e1009947

مصطلحات موضوعية: Ecology, Bacteria, Microbiota, Gastrointestinal Microbiome, Cellular and Molecular Neuroscience, Mice, ddc:590, Computational Theory and Mathematics, Modeling and Simulation, Genetics, Animals, Humans, Metagenome, ddc:576.5, Metagenomics, ddc:612, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Phylogeny

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dd11d6a8c222171aba85f65b5f7d6ca8
https://pubmed.ncbi.nlm.nih.gov/35259160

المؤلفون: Kieser, Silas

المساهمون: Trajkovski, Mirko, Zdobnov, Evgeny

مصطلحات موضوعية: Gut Microbiome, Genome, Metagenome-assembled genomes, Mouse, Viruses, Metagenomics, ddc:612

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::21f2d187415b1a7e09d373f84b4bc39a
https://archive-ouverte.unige.ch/unige:159675

المؤلفون: Trickovic, Matija, Kieser, Silas, Zdobnov, Evgeny, Trajkovski, Mirko

Relation: https://doi.org/10.5281/zenodo.10903654; https://doi.org/10.5281/zenodo.10903655; oai:zenodo.org:10903655

الاتاحة: https://doi.org/10.5281/zenodo.10903655

المؤلفون: Kieser, Silas, Brown, Joseph, Zdobnov, Evgeny M., Trajkovski, Mirko, McCue, Lee Ann

مصطلحات موضوعية: 59 BASIC BIOLOGICAL SCIENCES

وصف الملف: application/pdf

Relation: http://www.osti.gov/servlets/purl/1646625; https://www.osti.gov/biblio/1646625; https://doi.org/10.1186/s12859-020-03585-4

الاتاحة: http://www.osti.gov/servlets/purl/1646625
https://www.osti.gov/biblio/1646625
https://doi.org/10.1186/s12859-020-03585-4

المؤلفون: Stojanovic, Ozren, Kieser, Silas, Trajkovski, Mirko

المصدر: ISSN: 0955-0674 ; Current Opinion in Cell Biology, vol. 55 (2018) p. 67-73.

مصطلحات موضوعية: info:eu-repo/classification/ddc/590, info:eu-repo/classification/ddc/612

Relation: info:eu-repo/semantics/altIdentifier/pmid/30007128; info:eu-repo/grantAgreement/EC/FP7/336607/EU/Role of miRNAs in brown and white adipose tissue differentiation and function/MIRBATWAT; https://archive-ouverte.unige.ch/unige:122897; unige:122897

الاتاحة: https://archive-ouverte.unige.ch/unige:122897

المؤلفون: Sarker, Shafiqul Alam, Berger, Bernard, Deng, Ying, Kieser, Silas, Foata, Francis, Moine, Deborah, Descombes, Patrick, Sultana, Shamima, Huq, Sayeeda, Bardhan, Pradip Kumar, Vuillet, Valerie, Praplan, Fabienne, Brussow, Harald

المصدر: http://infoscience.epfl.ch/record/226994.

Relation: ISI:000393587200027; http://infoscience.epfl.ch/record/226994

الاتاحة: https://doi.org/10.1111/1462-2920.13574
http://infoscience.epfl.ch/record/226994

المؤلفون: Sarker, Shafiqul Alam, Berger, Bernard, Deng, Ying, Kieser, Silas, Foata, Francis, Moine, Deborah, Descombes, Patrick, Sultana, Shamima, Huq, Sayeeda, Bardhan, Pradip Kumar, Vuillet, Valérie, Praplan, Fabienne, Brüssow, Harald

المصدر: Environmental Microbiology; Jan2017, Vol. 19 Issue 1, p237-250, 14p

مصطلحات موضوعية: ESCHERICHIA coli, BACTERIOPHAGES, RIBOSOMAL RNA, DIARRHEA in children, PHENOTYPES