المؤلفون: Kartha, Vinay K.

Thesis Advisors: Monti, Stefano

مصطلحات موضوعية: Bioinformatics, Head and neck cancer, Multi-omic investigation, Oral squamous cell carcinoma, TCGA

الاتاحة: https://hdl.handle.net/2144/31318

المؤلفون: Ulirsch, Jacob C, Lareau, Caleb A, Bao, Erik L, Ludwig, Leif S, Guo, Michael H, Benner, Christian, Satpathy, Ansuman T, Kartha, Vinay K, Salem, Rany M, Hirschhorn, Joel N, Finucane, Hilary K, Aryee, Martin J, Buenrostro, Jason D, Sankaran, Vijay G

المصدر: Nature Genetics. 51(4)

مصطلحات موضوعية: Human Genome, Genetics, Stem Cell Research - Nonembryonic - Non-Human, Stem Cell Research, Biotechnology, 1.1 Normal biological development and functioning, Aetiology, Underpinning research, 2.1 Biological and endogenous factors, Generic health relevance, Cell Lineage, Chromatin, Chromosome Mapping, Epigenomics, Genome-Wide Association Study, Hematopoiesis, Humans, Linkage Disequilibrium, Phenotype, Polymorphism, Single Nucleotide, Quantitative Trait Loci, Regulatory Sequences, Nucleic Acid, Biological Sciences, Medical and Health Sciences, Developmental Biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/30z8m9tw

المؤلفون: Cheong, Jin-Gyu, Ravishankar, Arjun, Sharma, Siddhartha, Parkhurst, Christopher N., Grassmann, Simon A., Wingert, Claire K., Laurent, Paoline, Ma, Sai, Paddock, Lucinda, Miranda, Isabella C., Karakaslar, Emin Onur, Nehar-Belaid, Djamel, Thibodeau, Asa, Bale, Michael J., Kartha, Vinay K., Yee, Jim K., Mays, Minh Y., Jiang, Chenyang, Daman, Andrew W., Martinez de Paz, Alexia, Ahimovic, Dughan, Ramos, Victor, Lercher, Alexander, Nielsen, Erik, Alvarez-Mulett, Sergio, Zheng, Ling, Earl, Andrew, Yallowitz, Alisha, Robbins, Lexi, LaFond, Elyse, Weidman, Karissa L., Racine-Brzostek, Sabrina, Yang, He S., Price, David R., Leyre, Louise, Rendeiro, André F., Ravichandran, Hiranmayi, Kim, Junbum, Borczuk, Alain C., Rice, Charles M., Jones, R. Brad, Schenck, Edward J., Kaner, Robert J., Chadburn, Amy, Zhao, Zhen, Pascual, Virginia, Elemento, Olivier, Schwartz, Robert E., Buenrostro, Jason D., Niec, Rachel E.

المصدر: Cell ; volume 186, issue 18, page 3882-3902.e24 ; ISSN 0092-8674

الاتاحة: http://dx.doi.org/10.1016/j.cell.2023.07.019
https://api.elsevier.com/content/article/PII:S0092867423007961?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867423007961?httpAccept=text/plain

المؤلفون: Hoss, Andrew G., Kartha, Vinay K., Dong, Xianjun, Latourelle, Jeanne C., Dumitriu, Alexandra, Hadzi, Tiffany C., Macdonald, Marcy E., Gusella, James F., Akbarian, Schahram, Chen, Jiang-Fan, Weng, Zhiping, Myers, Richard H.

المساهمون: Program in Bioinformatics and Integrative Biology

المصدر: PLoS genetics ; 10 ; 2 ; e1004188

مصطلحات موضوعية: Genetics, Genetics and Genomics, Molecular Genetics, Nervous System Diseases

Relation: Link to Article in PubMed; PLoS Genet. 2014 Feb 27;10(2):e1004188. doi:10.1371/journal.pgen.1004188. eCollection 2014. Link to article on publisher's site; 1553-7390 (Linking); http://hdl.handle.net/20.500.14038/30175; https://escholarship.umassmed.edu/cgi/viewcontent.cgi?article=1417&context=faculty_pubs&unstamped=1; https://escholarship.umassmed.edu/faculty_pubs/418; 6251696; faculty_pubs/418

الاتاحة: https://doi.org/10.1371/journal.pgen.1004188
https://hdl.handle.net/20.500.14038/30175
https://escholarship.umassmed.edu/cgi/viewcontent.cgi?article=1417&context=faculty_pubs&unstamped=1
https://escholarship.umassmed.edu/faculty_pubs/418

المؤلفون: Hoss, Andrew G., Labadorf, Adam, Latourelle, Jeanne C., Kartha, Vinay K., Hadzi, Tiffany C., Gusella, James F., MacDonald, Marcy E., Chen, Jiang-Fan, Akbarian, Schahram, Weng, Zhiping, Vonsattel, Jean Paul, Myers, Richard H.

المساهمون: Department of Biochemistry and Molecular Pharmacology, Program in Bioinformatics and Integrative Biology

المصدر: BMC medical genomics ; 8 ; 10

مصطلحات موضوعية: Biochemistry, Biophysics, and Structural Biology, Bioinformatics, Computational Biology, Genetics and Genomics, Integrative Biology, Systems Biology

Relation: Link to Article in PubMed; BMC Med Genomics. 2015 Mar 1;8:10. doi:10.1186/s12920-015-0083-3. Link to article on publisher's site; 1755-8794 (Linking); http://hdl.handle.net/20.500.14038/25903; https://escholarship.umassmed.edu/cgi/viewcontent.cgi?article=1049&context=bioinformatics_pubs&unstamped=1; https://escholarship.umassmed.edu/bioinformatics_pubs/45; 7256004; bioinformatics_pubs/45

الاتاحة: https://doi.org/10.1186/s12920-015-0083-3
https://hdl.handle.net/20.500.14038/25903
https://escholarship.umassmed.edu/cgi/viewcontent.cgi?article=1049&context=bioinformatics_pubs&unstamped=1
https://escholarship.umassmed.edu/bioinformatics_pubs/45

المؤلفون: Concepcion, Carla P, Ma, Sai, LaFave, Lindsay M, Bhutkar, Arjun, Liu, Manyuan, DeAngelo, Lydia P, Kim, Jonathan Y, Del Priore, Isabella, Schoenfeld, Adam J, Miller, Manon, Kartha, Vinay K, Westcott, Peter MK, Sánchez-Rivera, Francisco J, Meli, Kevin, Gupta, Manav, Bronson, Roderick T, Riely, Gregory J, Rekhtman, Natasha, Rudin, Charles M, Kim, Carla F, Regev, Aviv, Buenrostro, Jason D, Jacks, Tyler

المساهمون: Massachusetts Institute of Technology. Department of Biology

المصدر: PMC

وصف الملف: application/pdf

Relation: Cancer Discovery; https://hdl.handle.net/1721.1/146824; Concepcion, Carla P, Ma, Sai, LaFave, Lindsay M, Bhutkar, Arjun, Liu, Manyuan et al. 2022. "SMARCA4 inactivation promotes lineage-specific transformation and early metastatic features in the lung." Cancer Discovery, 12 (2).

الاتاحة: https://hdl.handle.net/1721.1/146824

المؤلفون: Kartha, Vinay K., Duarte, Fabiana M., Hu, Yan, Ma, Sai, Chew, Jennifer G., Lareau, Caleb A., Earl, Andrew, Burkett, Zach D., Kohlway, Andrew S., Lebofsky, Ronald, Buenrostro, Jason D.

المصدر: Cell Genomics ; volume 2, issue 9, page 100166 ; ISSN 2666-979X

الاتاحة: http://dx.doi.org/10.1016/j.xgen.2022.100166
https://api.elsevier.com/content/article/PII:S2666979X22001082?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2666979X22001082?httpAccept=text/plain

المؤلفون: Ma, Sai, Pelikan, Richard C, Fu, Yao, Kelly, Jennifer A, Murphy, David, Wiley, Graham B, Kartha, Vinay K, Lareau, Caleb, Buenrostro, Jason D, Gaffney, Patrick M

المصدر: Abstracts ; page A66.1-A66

الاتاحة: http://dx.doi.org/10.1136/lupus-2021-lupus21century.91
https://syndication.highwire.org/content/doi/10.1136/lupus-2021-lupus21century.91

المؤلفون: Ma, Sai, Zhang, Bing, LaFave, Lindsay M, Earl, Andrew S, Chiang, Zachary, Hu, Yan, Ding, Jiarui, Brack, Alison, Kartha, Vinay K, Tay, Tristan, Law, Travis, Lareau, Caleb, Hsu, Ya-Chieh, Regev, Aviv, Buenrostro, Jason D

المساهمون: Massachusetts Institute of Technology. Department of Biology, Koch Institute for Integrative Cancer Research at MIT

المصدر: PMC

وصف الملف: application/pdf

Relation: Cell; https://hdl.handle.net/1721.1/138197; Ma, Sai, Zhang, Bing, LaFave, Lindsay M, Earl, Andrew S, Chiang, Zachary et al. 2020. "Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin." Cell, 183 (4).

الاتاحة: https://hdl.handle.net/1721.1/138197

المؤلفون: LaFave, Lindsay M., Kartha, Vinay K., Ma, Sai, Meli, Kevin, Del Priore, Isabella, Lareau, Caleb, Naranjo, Santiago, Westcott, Peter M.K., Duarte, Fabiana M., Sankar, Venkat, Chiang, Zachary, Brack, Alison, Law, Travis, Hauck, Haley, Okimoto, Annalisa, Regev, Aviv, Buenrostro, Jason D., Jacks, Tyler

المصدر: PMC

وصف الملف: application/octet-stream

Relation: http://dx.doi.org/10.1016/j.ccell.2020.06.006; Cancer Cell; https://hdl.handle.net/1721.1/133249.2

الاتاحة: https://hdl.handle.net/1721.1/133249.2

المؤلفون: LaFave, Lindsay M., Kartha, Vinay K., Ma, Sai, Meli, Kevin, Del Priore, Isabella, Lareau, Caleb, Naranjo, Santiago, Westcott, Peter M.K., Duarte, Fabiana M., Sankar, Venkat, Chiang, Zachary, Brack, Alison, Law, Travis, Hauck, Haley, Okimoto, Annalisa, Regev, Aviv, Buenrostro, Jason D., Jacks, Tyler

المساهمون: National Cancer Institute

المصدر: Cancer Cell ; volume 38, issue 2, page 212-228.e13 ; ISSN 1535-6108

الاتاحة: http://dx.doi.org/10.1016/j.ccell.2020.06.006
https://api.elsevier.com/content/article/PII:S153561082030310X?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S153561082030310X?httpAccept=text/plain

المؤلفون: Ma, Sai, Zhang, Bing, LaFave, Lindsay M., Earl, Andrew S., Chiang, Zachary, Hu, Yan, Ding, Jiarui, Brack, Alison, Kartha, Vinay K., Tay, Tristan, Law, Travis, Lareau, Caleb, Hsu, Ya-Chieh, Regev, Aviv, Buenrostro, Jason D.

المساهمون: Chan Zuckerberg Initiative, Klarman Cell Observatory, Broad Institute, National Institutes of Health, Richard and Susan Smith Family Foundation, Allen Institute

المصدر: Cell ; volume 183, issue 4, page 1103-1116.e20 ; ISSN 0092-8674

الاتاحة: http://dx.doi.org/10.1016/j.cell.2020.09.056
https://api.elsevier.com/content/article/PII:S0092867420312538?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867420312538?httpAccept=text/plain

المؤلفون: Kartha, Vinay K., Sebastiani, Paola, Kern, Joseph G., Zhang, Liye, Varelas, Xaralabos, Monti, Stefano

المصدر: Frontiers in Genetics ; volume 10 ; ISSN 1664-8021

الاتاحة: http://dx.doi.org/10.3389/fgene.2019.00121
https://www.frontiersin.org/article/10.3389/fgene.2019.00121/full

المؤلفون: Kartha, Vinay K., Alamoud, Khalid A., Sadykov, Khikmet, Nguyen, Bach-Cuc, Laroche, Fabrice, Feng, Hui, Lee, Jina, Pai, Sara I., Varelas, Xaralabos, Egloff, Ann Marie, Snyder-Cappione, Jennifer E., Belkina, Anna C., Bais, Manish V., Monti, Stefano, Kukuruzinska, Maria A.

المساهمون: National Institute of Dental and Craniofacial Research, National Heart, Lung, and Blood Institute, Evans Center for Interdisciplinary Biomedical Research Affinity Research Collaborative

المصدر: Genome Medicine ; volume 10, issue 1 ; ISSN 1756-994X

الاتاحة: http://dx.doi.org/10.1186/s13073-018-0569-7
http://link.springer.com/content/pdf/10.1186/s13073-018-0569-7.pdf
http://link.springer.com/article/10.1186/s13073-018-0569-7/fulltext.html

المؤلفون: Massachusetts Institute of Technology. Department of Biology, Concepcion, Carla P, Ma, Sai, LaFave, Lindsay M, Bhutkar, Arjun, Liu, Manyuan, DeAngelo, Lydia P, Kim, Jonathan Y, Del Priore, Isabella, Schoenfeld, Adam J, Miller, Manon, Kartha, Vinay K, Westcott, Peter MK, Sánchez-Rivera, Francisco J, Meli, Kevin, Gupta, Manav, Bronson, Roderick T, Riely, Gregory J, Rekhtman, Natasha, Rudin, Charles M, Kim, Carla F, Regev, Aviv, Buenrostro, Jason D, Jacks, Tyler

المصدر: PMC

مصطلحات الفهرس: Article, http://purl.org/eprint/type/JournalArticle

URL: https://hdl.handle.net/1721.1/146824
10.1158/2159-8290.CD-21-0248
Cancer Discovery

المؤلفون: LaFave, Lindsay M., Kartha, Vinay K., Ma, Sai, Meli, Kevin, Del Priore, Isabella, Lareau, Caleb, Naranjo, Santiago, Westcott, Peter M.K., Duarte, Fabiana M., Sankar, Venkat, Chiang, Zachary, Brack, Alison, Law, Travis, Hauck, Haley, Okimoto, Annalisa, Regev, Aviv, Buenrostro, Jason D., Jacks, Tyler

المصدر: PMC

مصطلحات الفهرس: Article, http://purl.org/eprint/type/JournalArticle

URL: https://hdl.handle.net/1721.1/133249.2
http://dx.doi.org/10.1016/j.ccell.2020.06.006
Cancer Cell

المؤلفون: Kartha, Vinay K., Stawski, Lukasz, Han, Rong, Haines, Paul, Gallagher, George, Noonan, Vikki, Kukuruzinska, Maria, Monti, Stefano, Trojanowska, Maria

المساهمون: St-Pierre, Yves, National Institute of Arthritis and Musculoskeletal and Skin Diseases

المصدر: PLOS ONE ; volume 11, issue 4, page e0154645 ; ISSN 1932-6203

الاتاحة: http://dx.doi.org/10.1371/journal.pone.0154645
http://dx.plos.org/10.1371/journal.pone.0154645

المؤلفون: Hoss, Andrew G, Labadorf, Adam, Latourelle, Jeanne C, Kartha, Vinay K, Hadzi, Tiffany C, Gusella, James F, MacDonald, Marcy E, Chen, Jiang-Fan, Akbarian, Schahram, Weng, Zhiping, Vonsattel, Jean, Myers, Richard H

مصطلحات موضوعية: Huntington’s disease, Human, Prefrontal cortex, Striatum, miRNA-sequencing, microRNA, miRNA, RNA biology, Age at onset, Neuropathological involvement

Relation: http://www.biomedcentral.com/1755-8794/8/10

الاتاحة: http://www.biomedcentral.com/1755-8794/8/10

المؤلفون: Massachusetts Institute of Technology. Department of Biology, Koch Institute for Integrative Cancer Research at MIT, Ma, Sai, Zhang, Bing, LaFave, Lindsay M, Earl, Andrew S, Chiang, Zachary, Hu, Yan, Ding, Jiarui, Brack, Alison, Kartha, Vinay K, Tay, Tristan, Law, Travis, Lareau, Caleb, Hsu, Ya-Chieh, Regev, Aviv, Buenrostro, Jason D

المصدر: PMC

مصطلحات الفهرس: Article, http://purl.org/eprint/type/JournalArticle

URL: https://hdl.handle.net/1721.1/138197
10.1016/J.CELL.2020.09.056
Cell

المؤلفون: LaFave, Lindsay M, Kartha, Vinay K, Ma, Sai, Meli, Kevin, Del Priore, Isabella, Lareau, Caleb, Naranjo, Santiago, Westcott, Peter MK, Duarte, Fabiana M, Sankar, Venkat, Chiang, Zachary, Brack, Alison, Law, Travis, Hauck, Haley, Okimoto, Annalisa, Regev, Aviv, Buenrostro, Jason D, Jacks, Tyler

المصدر: PMC

مصطلحات الفهرس: Article, http://purl.org/eprint/type/JournalArticle

URL: https://hdl.handle.net/1721.1/133249
10.1016/J.CCELL.2020.06.006
Cancer Cell