المؤلفون: Lakshana Sruthi Sadu Murari, Sam Kunkel, Anala Shetty, Addison Bents, Aayush Bhandary, Juan Carlos Rivera-Mulia

المصدر: Cells, Vol 14, Iss 1, p 43 (2025)

مصطلحات موضوعية: TP63, senescence, aging, disease, genome organization, Cytology, QH573-671

وصف الملف: electronic resource

Relation: https://www.mdpi.com/2073-4409/14/1/43; https://doaj.org/toc/2073-4409

URL الوصول: https://doaj.org/article/01bb9c2335294ed08740ca86259bafd2

المؤلفون: Anala Shetty, Seunghyun Lim, Phoebe Strell, Clifford J. Steer, Juan Carlos Rivera-Mulia, Walter C. Low

المصدر: Cell Transplantation, Vol 32 (2023)

مصطلحات موضوعية: Medicine

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1555-3892

URL الوصول: https://doaj.org/article/a9d00e310df4438ca1fd14e1bc787dc9

المؤلفون: Sravan Kodali, Silvia Meyer-Nava, Stephen Landry, Arijita Chakraborty, Juan Carlos Rivera-Mulia, Wenyi Feng

المصدر: Frontiers in Genetics, Vol 13 (2022)

مصطلحات موضوعية: DNA double strand break (DSB), common fragile site (CFS), DNA replication stress, histone H3K36 trimethylation, histone H3K27 trimethylation, CTCF, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fgene.2022.907547/full; https://doaj.org/toc/1664-8021

URL الوصول: https://doaj.org/article/27dd44996eaf4511b53034ed211719df

المؤلفون: Dan Sarni, Takayo Sasaki, Michal Irony Tur-Sinai, Karin Miron, Juan Carlos Rivera-Mulia, Brian Magnuson, Mats Ljungman, David M. Gilbert, Batsheva Kerem

المصدر: Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/9f8f6dfda64441a5ae8eee34d19b3fb8

المؤلفون: Jing Zhang, Donghoon Lee, Vineet Dhiman, Peng Jiang, Jie Xu, Patrick McGillivray, Hongbo Yang, Jason Liu, William Meyerson, Declan Clarke, Mengting Gu, Shantao Li, Shaoke Lou, Jinrui Xu, Lucas Lochovsky, Matthew Ung, Lijia Ma, Shan Yu, Qin Cao, Arif Harmanci, Koon-Kiu Yan, Anurag Sethi, Gamze Gürsoy, Michael Rutenberg Schoenberg, Joel Rozowsky, Jonathan Warrell, Prashant Emani, Yucheng T. Yang, Timur Galeev, Xiangmeng Kong, Shuang Liu, Xiaotong Li, Jayanth Krishnan, Yanlin Feng, Juan Carlos Rivera-Mulia, Jessica Adrian, James R Broach, Michael Bolt, Jennifer Moran, Dominic Fitzgerald, Vishnu Dileep, Tingting Liu, Shenglin Mei, Takayo Sasaki, Claudia Trevilla-Garcia, Su Wang, Yanli Wang, Chongzhi Zang, Daifeng Wang, Robert J. Klein, Michael Snyder, David M. Gilbert, Kevin Yip, Chao Cheng, Feng Yue, X. Shirley Liu, Kevin P. White, Mark Gerstein

المصدر: Nature Communications, Vol 11, Iss 1, Pp 1-11 (2020)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/d3ef1766b33842a5aa6bd3194efeba4e

المؤلفون: Juan Carlos Rivera-Mulia, Takayo Sasaki, Claudia Trevilla-Garcia, Naoto Nakamichi, David J. H.F. Knapp, Colin A. Hammond, Bill H. Chang, Jeffrey W. Tyner, Meenakshi Devidas, Jared Zimmerman, Kyle N. Klein, Vivek Somasundaram, Brian J. Druker, Tanja A. Gruber, Amnon Koren, Connie J. Eaves, David M. Gilbert

المصدر: Blood Advances, Vol 3, Iss 21, Pp 3201-3213 (2019)

مصطلحات موضوعية: Specialties of internal medicine, RC581-951

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2473952920317821; https://doaj.org/toc/2473-9529

URL الوصول: https://doaj.org/article/813e5445336443a09e50cbf90d7c35a2

المؤلفون: Vishnu Dileep, Korey A. Wilson, Claire Marchal, Xiaowen Lyu, Peiyao A. Zhao, Ben Li, Axel Poulet, Daniel A. Bartlett, Juan Carlos Rivera-Mulia, Zhaohui S. Qin, Allan J. Robins, Thomas C. Schulz, Michael J. Kulik, Rachel Patton McCord, Job Dekker, Stephen Dalton, Victor G. Corces, David M. Gilbert

المصدر: Stem Cell Reports, Vol 13, Iss 1, Pp 193-206 (2019)

مصطلحات موضوعية: Medicine (General), R5-920, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2213671119301882; https://doaj.org/toc/2213-6711

URL الوصول: https://doaj.org/article/10954ee9cc994312ad7b50a922dfb82d

المؤلفون: Roberta L Hannibal, Edward B Chuong, Juan Carlos Rivera-Mulia, David M Gilbert, Anton Valouev, Julie C Baker

المصدر: PLoS Genetics, Vol 10, Iss 5, p e1004290 (2014)

مصطلحات موضوعية: Genetics, QH426-470

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC4006706?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

URL الوصول: https://doaj.org/article/826687c148ed43859b54ab92899d3be0

المؤلفون: Paul Robson, Qin Ma, William Sanders, Tiffany Cortes, Carolyn Glass, Juan Carlos Rivera-Mulia, Andreas Bueckle

المصدر: Nat Aging

مصطلحات موضوعية: Aging, Neuroscience (miscellaneous), Geriatrics and Gerontology, Article

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::38b9b9977a6e248cb9738e8ef4c20df0
https://europepmc.org/articles/PMC10019484/

المؤلفون: Silvia Meyer, Juan Carlos Rivera-Mulia

المصدر: Molecular Cell. 82:2541-2543

مصطلحات موضوعية: Cell Nucleus, Chromosomal Proteins, Non-Histone, Cell Cycle Proteins, Cell Biology, Molecular Biology, Chromatin

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e02427be79c674478e82f952b23a61b6
https://doi.org/10.1016/j.molcel.2022.06.028

المؤلفون: Patty Lee, Philip Blood, Katy Börner, Judith Campisi, Feng Chen, Heike Daldrup-Link, Phil De Jager, Li Ding, Francesca E. Duncan, Oliver Eickelberg, Rong Fan, Toren Finkel, Vesna Garovic, Nils Gehlenborg, Carolyn Glass, Ziv Bar-Joseph, Pragati Katiyar, So-Jin Kim, Melanie Königshoff, George Kuchel, Haesung Lee, Jun H. Lee, Jian Ma, Qin Ma, Simon Melov, Kay Metis, Ana L. Mora, Nicolas Musi, Nicola Neretti, João F. Passos, Irfan Rahman, Juan Carlos Rivera-Mulia, Paul Robson, Mauricio Rojas, Ananda L. Roy, Birgit Schilling, Pixu Shi, Jonathan Silverstein, Vidyani Suryadevera, Jichun Xie, Jinhua Wang, An-Kwok Ian Wong, Laura Niedernhofer

مصطلحات موضوعية: cell_developmental_biology

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e62e81b0034df46256f5d3dcb4a4e032
https://doi.org/10.20944/preprints202207.0160.v2

المؤلفون: Sravan Kodali, Silvia Meyer-Nava, Stephen Landry, Arijita Chakraborty, Juan Carlos Rivera-Mulia, Wenyi Feng

مصطلحات موضوعية: Genetics, Genetic Engineering, Biomarkers, Developmental Genetics (incl. Sex Determination), Epigenetics (incl. Genome Methylation and Epigenomics), Gene Expression (incl. Microarray and other genome-wide approaches), Genome Structure and Regulation, Genomics, Genetically Modified Animals, Livestock Cloning, Gene and Molecular Therapy, DNA double strand break (DSB), common fragile site (CFS), DNA replication stress, histone H3K36 trimethylation, histone H3K27 trimethylation, CTCF, topologically associated domain (TAD)

Relation: https://figshare.com/articles/dataset/Table1_Epigenomic_signatures_associated_with_spontaneous_and_replication_stress-induced_DNA_double_strand_breaks_XLSX/21616953

الاتاحة: https://doi.org/10.3389/fgene.2022.907547.s002
https://figshare.com/articles/dataset/Table1_Epigenomic_signatures_associated_with_spontaneous_and_replication_stress-induced_DNA_double_strand_breaks_XLSX/21616953

المؤلفون: Sravan Kodali, Silvia Meyer-Nava, Stephen Landry, Arijita Chakraborty, Juan Carlos Rivera-Mulia, Wenyi Feng

مصطلحات موضوعية: Genetics, Genetic Engineering, Biomarkers, Developmental Genetics (incl. Sex Determination), Epigenetics (incl. Genome Methylation and Epigenomics), Gene Expression (incl. Microarray and other genome-wide approaches), Genome Structure and Regulation, Genomics, Genetically Modified Animals, Livestock Cloning, Gene and Molecular Therapy, DNA double strand break (DSB), common fragile site (CFS), DNA replication stress, histone H3K36 trimethylation, histone H3K27 trimethylation, CTCF, topologically associated domain (TAD)

Relation: https://figshare.com/articles/dataset/DataSheet1_Epigenomic_signatures_associated_with_spontaneous_and_replication_stress-induced_DNA_double_strand_breaks_PDF/21616950

الاتاحة: https://doi.org/10.3389/fgene.2022.907547.s001
https://figshare.com/articles/dataset/DataSheet1_Epigenomic_signatures_associated_with_spontaneous_and_replication_stress-induced_DNA_double_strand_breaks_PDF/21616950

المؤلفون: Carrie A. Davis, Charles B. Epstein, Eric L. Van Nostrand, Valentina Snetkova, Michael J. Purcaro, Manolis Kellis, Yupeng He, Henry Pratt, John A. Stamatoyannopoulos, Ali Mortazavi, Xintao Wei, Michael Snyder, Jialing Zhang, Job Dekker, Anshul Kundaje, Shaimae I. Elhajjajy, Gene W. Yeo, Jessica Halow, Peggy J. Farnham, Kevin P. White, Xiaofeng Wang, Eric M. Mendenhall, Diane E. Dickel, John L. Rinn, Thomas R. Gingeras, Yin Shen, Juan Carlos Rivera-Mulia, David U. Gorkin, William Stafford Noble, Rajinder Kaul, David M. Gilbert, Jill Moore, Xiao-Ou Zhang, Peter Freese, Bing Ren, Joseph R. Ecker, Eric Lécuyer, Christopher B. Burge, Ross C. Hardison, Jing Zhang, Zhiping Weng, Richard M. Myers, Robert J. Klein, Brian A. Williams, Alexander Dobin, Alec Victorsen, Noam Shoresh, Joel Rozowsky, Jack Huey, Bradley E. Bernstein, Mark Mackiewicz, Roderic Guigó, Axel Visel, Brenton R. Graveley, J. Michael Cherry, Trupti Kawli, Mark Gerstein, Cheryl A. Keller, Barbara J. Wold, Jessika Adrian, Len A. Pennacchio, Florencia Pauli-Behn, Surya B. Chhetri

المصدر: Moore, Jill E; Purcaro, Michael J; Pratt, Henry E; Epstein, Charles B; Shoresh, Noam; Adrian, Jessika; Kawli, Trupti; Davis, Carrie A; Dobin, Alexander; Kaul, Rajinder; Halow, Jessica; Van Nostrand, Eric L; Freese, Peter; Gorkin, David U; Shen, Yin; He, Yupeng; Mackiewicz, Mark; Pauli-Behn, Florencia; Williams, Brian A; Mortazavi, Ali; ... (2020). Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature, 583(7818), pp. 699-710. Springer Nature 10.1038/s41586-020-2493-4 <http://dx.doi.org/10.1038/s41586-020-2493-4>
Nature
Nature, vol. 583, no. 7818, pp. 699-710

مصطلحات موضوعية: Epigenomics, Transcription, Genetic, DNA Replication Timing, General Science & Technology, DNA Footprinting, Transposases, Mice, Transgenic, Genomics, Context (language use), 610 Medicine & health, Computational biology, Regulatory Sequences, Nucleic Acid, Biology, ENCODE, Genome, Article, Histones, Mice, Databases, Genetic, Animals, Deoxyribonuclease I, Humans, Registries, data integration, Multidisciplinary, Genome, Human, RNA-Binding Proteins, Molecular Sequence Annotation, Functional genomics, DNA, DNA Methylation, Chromatin, epigenomics, DNA methylation, Data integration, functional genomics

وصف الملف: application/pdf; Print-Electronic; application/zip; image/jpeg

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2c895e469a429f18f75d20f5b0e64d2e
https://boris.unibe.ch/146110/1/s41586-020-2493-4.pdf

المؤلفون: David M. Gilbert, Takayo Sasaki, Michal Irony Tur-Sinai, Mats Ljungman, Dan Sarni, Juan Carlos Rivera-Mulia, Brian Magnuson, Batsheva Kerem, Karin Miron

المصدر: Nature Communications
Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020)

مصطلحات موضوعية: 0301 basic medicine, Genome instability, Transcription, Genetic, DNA Replication Timing, Science, General Physics and Astronomy, Double-strand DNA breaks, Computational biology, Biology, DNA replication, Genome, Sensitivity and Specificity, General Biochemistry, Genetics and Molecular Biology, Article, Genomic Instability, Cell Line, 03 medical and health sciences, 0302 clinical medicine, Aphidicolin, Chromosome instability, Neoplasms, Humans, Gene Regulatory Networks, lcsh:Science, Transcriptomics, Gene, Genomic organization, Nuclear organization, Multidisciplinary, Genome, Human, Chromosomal fragile site, Chromosome Fragile Sites, Chromosome Mapping, High-Throughput Nucleotide Sequencing, General Chemistry, DNA, Fibroblasts, 030104 developmental biology, 030220 oncology & carcinogenesis, Chromatin Immunoprecipitation Sequencing, Nucleic Acid Conformation, lcsh:Q, Fragile sites

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::20f264446c1d49c631eda92f794d04cc
http://europepmc.org/articles/PMC7367836

المؤلفون: Ye Zhan, Hongbo Yang, Lijun Zhang, William Stafford Noble, Dubravka Pezic, Victoria T. Le, Duncan T. Odom, Rajinder Kaul, David M. Gilbert, Christopher Pool, Ross C. Hardison, James R. Broach, Job Dekker, Suzana Hadjur, Vishnu Dileep, Darrin V. Bann, Jesse R. Dixon, Ferhat Ay, Tingting Liu, Yanli Wang, Jie Xu, Bryan R. Lajoie, Sriranga Iyyanki, Christina Ernst, John A. Stamatoyannopoulos, Michael Buckley, Abhijit Chakraborty, Juan Carlos Rivera-Mulia, Feng Yue, Takayo Sasaki, Kristen Lee, Royden A. Clark, Morgan Diegel, Lin An, Hakan Ozadam, Galip Gürkan Yardımcı, Fan Song

المصدر: Nature Genetics. 50:1388-1398

مصطلحات موضوعية: 0301 basic medicine, Sequence analysis, Genomic Structural Variation, Computational biology, Biology, Genome, Linkage Disequilibrium, Article, Chromosome conformation capture, Structural variation, 03 medical and health sciences, Cell Line, Tumor, Neoplasms, DNA Replication Timing, Genetics, Humans, Gene, Genome, Human, Systems Biology, Chromosome Mapping, Genetic Variation, High-Throughput Nucleotide Sequencing, DNA, Neoplasm, Sequence Analysis, DNA, Chromatin, Systems Integration, 030104 developmental biology, A549 Cells, K562 Cells, Genes, Neoplasm

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fb10305ce347ee812c83011a65c0df3e
https://doi.org/10.1038/s41588-018-0195-8

المؤلفون: Jiao Sima, Takayo Sasaki, David M. Gilbert, Juan Carlos Rivera-Mulia, Ebtesam Nafie, Claire Marchal, Daniel L. Vera, Claudia Trevilla-Garcia, Coralin Nogues, Korey A. Wilson

المصدر: Nature Protocols. 13:819-839

مصطلحات موضوعية: DNA Replication, 0301 basic medicine, Chromatin Immunoprecipitation, Mutation rate, Computational biology, Biology, Genome, Article, General Biochemistry, Genetics and Molecular Biology, DNA sequencing, Cell Line, Time, Mice, 03 medical and health sciences, chemistry.chemical_compound, Animals, Replication timing, Staining and Labeling, DNA replication, High-Throughput Nucleotide Sequencing, Mouse Embryonic Stem Cells, DNA, Chromatin, 030104 developmental biology, Bromodeoxyuridine, chemistry, Nat, Cell Division

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::49b960b794c67422d23f450001bc3e7e
https://doi.org/10.1038/nprot.2017.148

المؤلفون: Juan Carlos Rivera Mulia, Armando Aranda Anzaldo

المصدر: Ciencia Ergo Sum, Vol 15, Iss 3, Pp 269-286 (2008)

مصطلحات موضوعية: adn, bucles de adn, bucles de dna, cromatina, matriz nuclear, dna mars, origen de replicación, orc, Science, Social Sciences

Relation: http://www.redalyc.org/articulo.oa?id=10415305; https://doaj.org/toc/1405-0269; https://doaj.org/toc/2395-8782; https://doaj.org/article/2cdc96501bf041fbbfe1b3d75f550f13

الاتاحة: https://doaj.org/article/2cdc96501bf041fbbfe1b3d75f550f13

المؤلفون: Juan Carlos Rivera-Mulia, Armando Aranda-Anzaldo, Evangelina Silva-Santiago

المصدر: Journal of Cellular Biochemistry. 118:2151-2160

مصطلحات موضوعية: 0301 basic medicine, Cell Biology, Nuclear matrix, Biochemistry, Cell biology, Chromatin, Nuclear DNA, 03 medical and health sciences, chemistry.chemical_compound, 030104 developmental biology, medicine.anatomical_structure, chemistry, medicine, Nucleoid, DNA supercoil, Scaffold/matrix attachment region, Molecular Biology, Nucleus, DNA

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::2922c13c99f164c53a524536a5f2d3dd
https://doi.org/10.1002/jcb.25852

المؤلفون: Franck Pellestor, Jean-Marc Lemaitre, Quentin Szabo, Giorgio L. Papadopoulos, Juan Carlos Rivera-Mulia, Satish Sati, Pauline Bouret, Giacomo Cavalli, Daniel Jost, Modesto Orozco, Frédéric Bantignies, François Serra, Boyan B. Bonev, Lauriane Fritsch, David Castillo, David M. Gilbert, Paul Bensadoun, Josep Ll. Gelpi, Vincent Loubiere, Cédric Vaillant, Marc A. Marti-Renom

المساهمون: Institut de génétique humaine (IGH), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Cellules Souches, Plasticité Cellulaire, Médecine Régénératrice et Immunothérapies (IRMB), Centre Hospitalier Régional Universitaire [Montpellier] (CHRU Montpellier)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM), Helmholtz Zentrum München = German Research Center for Environmental Health, Techniques de l'Ingénierie Médicale et de la Complexité - Informatique, Mathématiques et Applications Grenoble - UMR 5525 (TIMC-IMAG), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP ), Université Grenoble Alpes (UGA), Barcelona Institute of Science and Technology (BIST), University of Minnesota Medical School, University of Minnesota System, CHU Montpellier, Centre Hospitalier Régional Universitaire [Montpellier] (CHRU Montpellier), Barcelona Supercomputing Center - Centro Nacional de Supercomputacion (BSC - CNS), University of Barcelona, Laboratoire de Physique de l'ENS Lyon (Phys-ENS), École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS), Florida State University [Tallahassee] (FSU), Université de Montpellier (UM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre Hospitalier Régional Universitaire [Montpellier] (CHRU Montpellier)

المصدر: Molecular Cell
Molecular Cell, 2020, 78 (3), pp.522-538.e9. ⟨10.1016/j.molcel.2020.03.007⟩
Dipòsit Digital de la UB
Universidad de Barcelona
Molecular Cell, Elsevier, 2020, 78 (3), pp.522-538.e9. ⟨10.1016/j.molcel.2020.03.007⟩

مصطلحات موضوعية: Senescence, DNA (Cytosine-5-)-Methyltransferase 1, senescence, Heterochromatin, Carcinogenesis, [SDV]Life Sciences [q-bio], Bisulfite sequencing, Biology, Genome, Cromatina, 03 medical and health sciences, replicative senescence, 0302 clinical medicine, Oncogènesi, Envelliment, Hi-C, Humans, Molecular Biology, Gene, Cells, Cultured, Cellular Senescence, In Situ Hybridization, Fluorescence, 030304 developmental biology, Regulation of gene expression, 0303 health sciences, Genome, Human, DNMT1, oncogene-induced senescence, Cell Biology, Epigenome, Oncogenes, chromatin compartments, DNA Methylation, Fibroblasts, Chromatin Assembly and Disassembly, Epigenètica, Chromatin, Cell biology, Genòmica, Epigenetics, gene regulation, 030217 neurology & neurosurgery, Genètica, 3D genome architecture

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::65472d220bf71dddf91a17e3ea08e122