المؤلفون: Jean-David Larouche, Céline M Laumont, Assya Trofimov, Krystel Vincent, Leslie Hesnard, Sylvie Brochu, Caroline Côté, Juliette F Humeau, Éric Bonneil, Joel Lanoix, Chantal Durette, Patrick Gendron, Jean-Philippe Laverdure, Ellen R Richie, Sébastien Lemieux, Pierre Thibault, Claude Perreault

المصدر: eLife, Vol 12 (2024)

مصطلحات موضوعية: transposable elements, thymus, central tolerance, thymic epithelial cells, plasmacytoid dendritic cells, Medicine, Science, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://elifesciences.org/articles/91037; https://doaj.org/toc/2050-084X

URL الوصول: https://doaj.org/article/f8e5dc8f11474cf292db53bbc1880f9d

المؤلفون: Leslie Hesnard, Catherine Thériault, Maxime Cahuzac, Chantal Durette, Krystel Vincent, Marie-Pierre Hardy, Joël Lanoix, Gabriel Ouellet Lavallée, Juliette Humeau, Pierre Thibault, Claude Perreault

المصدر: Current Oncology, Vol 31, Iss 6, Pp 3099-3121 (2024)

مصطلحات موضوعية: tumor-specific antigen, vaccine, mass spectrometry, antigen presentation, immunogenicity, dendritic cells, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

Relation: https://www.mdpi.com/1718-7729/31/6/236; https://doaj.org/toc/1198-0052; https://doaj.org/toc/1718-7729; https://doaj.org/article/12eb4b94c81d4840bf379764f030a99c

الاتاحة: https://doi.org/10.3390/curroncol31060236
https://doaj.org/article/12eb4b94c81d4840bf379764f030a99c

المؤلفون: Maria Virginia Ruiz Cuevas, Marie-Pierre Hardy, Jaroslav Hollý, Éric Bonneil, Chantal Durette, Mathieu Courcelles, Joël Lanoix, Caroline Côté, Louis M. Staudt, Sébastien Lemieux, Pierre Thibault, Claude Perreault, Jonathan W. Yewdell

المصدر: Cell Reports, Vol 34, Iss 10, Pp 108815- (2021)

مصطلحات موضوعية: computational biology, defective ribosomal products, major histocompatibility complex, mass spectrometry, non-canonical translation, peptides, Biology (General), QH301-705.5

Relation: http://www.sciencedirect.com/science/article/pii/S2211124721001297; https://doaj.org/toc/2211-1247; https://doaj.org/article/8429cc69806348e1a2f6b013296bbb36

الاتاحة: https://doi.org/10.1016/j.celrep.2021.108815
https://doaj.org/article/8429cc69806348e1a2f6b013296bbb36

المؤلفون: Nada Jabado, Claudia L. Kleinman, Livia Garzia, Michael D. Taylor, Stephen C. Mack, Benjamin A. Garcia, Peter W. Lewis, Pierre Thibault, Jay S. Wunder, Robert Turcotte, Brendan C. Dickson, Jason Karamchandani, Sungmi Jung, Ashot S. Harutyunyan, Véronique Lisi, Robert Eveleigh, Tianna S. Sihota, Kateryna Rossokhata, Siddhant U. Jain, Takeaki Ishii, Éric Bonneil, Joel Lanoix, Dylan M. Marchione, Damien Faury, Leonie G. Mikael, Carol C.L. Chen, Wajih Jawhar, Liam D. Hendrikse, Shriya Deshmukh, Nicolas De Jay, Sima Khazaei

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::366dfa05d673f172185c0b72a911cf0f
https://doi.org/10.1158/2159-8290.22535018.v1

المؤلفون: Nada Jabado, Claudia L. Kleinman, Livia Garzia, Michael D. Taylor, Stephen C. Mack, Benjamin A. Garcia, Peter W. Lewis, Pierre Thibault, Jay S. Wunder, Robert Turcotte, Brendan C. Dickson, Jason Karamchandani, Sungmi Jung, Ashot S. Harutyunyan, Véronique Lisi, Robert Eveleigh, Tianna S. Sihota, Kateryna Rossokhata, Siddhant U. Jain, Takeaki Ishii, Éric Bonneil, Joel Lanoix, Dylan M. Marchione, Damien Faury, Leonie G. Mikael, Carol C.L. Chen, Wajih Jawhar, Liam D. Hendrikse, Shriya Deshmukh, Nicolas De Jay, Sima Khazaei

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::240c3963b5983b5d16a4ad808d771db7
https://doi.org/10.1158/2159-8290.c.6547733.v1

المؤلفون: Nada Jabado, Claudia L. Kleinman, Livia Garzia, Michael D. Taylor, Stephen C. Mack, Benjamin A. Garcia, Peter W. Lewis, Pierre Thibault, Jay S. Wunder, Robert Turcotte, Brendan C. Dickson, Jason Karamchandani, Sungmi Jung, Ashot S. Harutyunyan, Véronique Lisi, Robert Eveleigh, Tianna S. Sihota, Kateryna Rossokhata, Siddhant U. Jain, Takeaki Ishii, Éric Bonneil, Joel Lanoix, Dylan M. Marchione, Damien Faury, Leonie G. Mikael, Carol C.L. Chen, Wajih Jawhar, Liam D. Hendrikse, Shriya Deshmukh, Nicolas De Jay, Sima Khazaei

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5a59f6967731efe8b32605d91a9136f7
https://doi.org/10.1158/2159-8290.22535021

المؤلفون: Nada Jabado, Claudia L. Kleinman, Livia Garzia, Michael D. Taylor, Stephen C. Mack, Benjamin A. Garcia, Peter W. Lewis, Pierre Thibault, Jay S. Wunder, Robert Turcotte, Brendan C. Dickson, Jason Karamchandani, Sungmi Jung, Ashot S. Harutyunyan, Véronique Lisi, Robert Eveleigh, Tianna S. Sihota, Kateryna Rossokhata, Siddhant U. Jain, Takeaki Ishii, Éric Bonneil, Joel Lanoix, Dylan M. Marchione, Damien Faury, Leonie G. Mikael, Carol C.L. Chen, Wajih Jawhar, Liam D. Hendrikse, Shriya Deshmukh, Nicolas De Jay, Sima Khazaei

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3990edb0e171ee5bbb7e67ab02fa67cb
https://doi.org/10.1158/2159-8290.22535027.v1

المؤلفون: Caroline Côté, Chantal Durette, Jean-Philippe Laverdure, Claude Perreault, Pamela S. Ohashi, Mathieu Courcelles, Qingchuan Zhao, Patrick Gendron, Céline M. Laumont, Eric Bonneil, Joel Lanoix, Krystel Vincent, Sébastien Lemieux, Douglas G. Millar, Pierre Thibault

المصدر: Cancer Immunology Research. 8:544-555

مصطلحات موضوعية: Cancer Research, medicine.medical_treatment, Immunology, Human leukocyte antigen, Biology, 03 medical and health sciences, 0302 clinical medicine, Cancer immunotherapy, Antigen, Antigens, Neoplasm, Biomarkers, Tumor, medicine, Humans, Copy-number variation, Allele frequency, Proteogenomics, Ovarian Neoplasms, medicine.disease, Cystadenocarcinoma, Serous, 030220 oncology & carcinogenesis, Mutation, DNA methylation, Cancer research, Female, Immunotherapy, Ovarian cancer, 030215 immunology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7f9f0d91b8b4c4466ab8711f56ca5971
https://doi.org/10.1158/2326-6066.cir-19-0541

المؤلفون: Eric Bonneil, Qing Ma, Lukas Reiter, Isabelle Sirois, Joel Lanoix, Etienne Caron, Roland Bruderer, Pierre Thibault, Laura Wessling, David Hamelin, Pouya Faridi, Jerome Despault, Frederic Saab, Eustache Paramithiotis, Chen Li, Mathieu Courcelles, Anthony W. Purcell, Anne Jang, Peter Kubiniok, Kevin A. Kovalchik, Marco Tognetti

المصدر: Molecular & Cellular Proteomics : MCP

مصطلحات موضوعية: Proteomics, Quality Control, Downstream (software development), MVP, MhcVizPipe, Computer science, Process (engineering), media_common.quotation_subject, NB, nonbinder, CLI, command line interface, WSL, Windows Subsystem for Linux, Sample (statistics), BF, binding fraction, computer.software_genre, Biochemistry, Analytical Chemistry, SB, strong binder, Special Issue: Immunopeptidomics, BA, binding affinity, MHC, major histocompatibility complex, Quality (business), GUI, graphical user interface, Molecular Biology, Graphical user interface, media_common, EL, eluted ligand, business.industry, software, HLA, human leukocyte antigen, Scale (chemistry), Histocompatibility Antigens Class I, Technological Innovation and Resources, immunopeptidomics, MS, KLD, Kullback-Leibler Distance, peptide, Core Facility, QC, quality control, WB, weak binder, LF, length fraction, Data mining, MHC, business, Peptides, computer, Quality assurance

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1e4f729f9dce7854de4a2d4a37a8aa55
http://europepmc.org/articles/PMC8717601

المؤلفون: Caroline Côté, Eric Bonneil, Chantal Durette, Louis M. Staudt, Joel Lanoix, Pierre Thibault, Jaroslav Hollý, Mathieu Courcelles, Marie-Pierre Hardy, Claude Perreault, Sébastien Lemieux, Maria Virginia Ruiz Cuevas, Jonathan W. Yewdell

المصدر: Cell Reports, Vol 34, Iss 10, Pp 108815-(2021)
Cell Rep

مصطلحات موضوعية: 0301 basic medicine, Gene isoform, Lymphoma, B-Cell, Proteome, Computational biology, Biology, General Biochemistry, Genetics and Molecular Biology, Article, 03 medical and health sciences, Open Reading Frames, 0302 clinical medicine, computational biology, Transcription (biology), Tandem Mass Spectrometry, Cell Line, Tumor, 0502 economics and business, MHC class I, defective ribosomal products, Humans, Protein Isoforms, Ribosome profiling, 050207 economics, Gene, lcsh:QH301-705.5, Chromatography, High Pressure Liquid, mass spectrometry, 050208 finance, Sequence Analysis, RNA, 05 social sciences, Histocompatibility Antigens Class I, RNA, Translation (biology), Ribosomal RNA, major histocompatibility complex, non-canonical translation, 030104 developmental biology, lcsh:Biology (General), biology.protein, peptides, Ribosomes, 030217 neurology & neurosurgery, Signal Transduction

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::72949b9111ebee6893424a0b7658b63d
http://www.sciencedirect.com/science/article/pii/S2211124721001297

المؤلفون: Eric Bonneil, Joel Lanoix, Anthony W. Purcell, Isabelle Sirois, Roland Bruderer, Marco Tognetti, Qing Ma, Frederic Saab, Kevin A. Kovalchik, Pouya Faridi, Lukas Reiter, Peter Kubiniok, Jerome Despault, Chen Li, Mathieu Courcelles, Etienne Caron, David Hamelin, Pierre Thibault, Laura Wessling

مصطلحات موضوعية: Class (computer programming), biology, Ligand, Computer science, Computational biology, Mass spectrometry, Major histocompatibility complex, Field (computer science), Visualization, Identification (information), MHC class I, biology.protein, Molecule, Isolation (database systems)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::3eb79c58cac76da3025b9c2e33ecbf83
https://doi.org/10.1101/2020.11.02.360958

المؤلفون: Jay S. Wunder, Jason Karamchandani, Ashot S. Harutyunyan, Nada Jabado, Robert E. Turcotte, Tianna S. Sihota, Damien Faury, Shriya Deshmukh, Peter W. Lewis, Kateryna Rossokhata, Stephen C. Mack, Brendan C. Dickson, Livia Garzia, Pierre Thibault, Leonie G. Mikael, Liam D. Hendrikse, Dylan M. Marchione, Carol C.L. Chen, Siddhant U. Jain, Takeaki Ishii, Sima Khazaei, Nicolas De Jay, Benjamin A. Garcia, Sungmi Jung, Véronique Lisi, Michael D. Taylor, Claudia L. Kleinman, Robert Eveleigh, Wajih Jawhar, Eric Bonneil, Joel Lanoix

المصدر: Cancer Discov

مصطلحات موضوعية: 0301 basic medicine, Stromal cell, Population, Gene Expression, Bone Neoplasms, Biology, Article, Extracellular matrix, Histones, 03 medical and health sciences, 0302 clinical medicine, medicine, Humans, Progenitor cell, education, Giant Cell Tumor of Bone, education.field_of_study, Tumor microenvironment, Osteoblasts, Mesenchymal stem cell, Mesenchymal Stem Cells, Osteoblast, Cell Differentiation, medicine.disease, Chromatin, Cell biology, Nucleosomes, 030104 developmental biology, medicine.anatomical_structure, Oncology, 030220 oncology & carcinogenesis, Mutation, Giant-cell tumor of bone

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d470d87166c7e4c2b3c682f0e0e8f252
https://europepmc.org/articles/PMC7710565/

المؤلفون: Albert Feghaly, Catherine Thériault, Grégory Ehx, Josée Hébert, Sébastien Lemieux, Eric Bonneil, Luca Vago, Guy Sauvageau, Jean-Philippe Laverdure, Pierre Thibault, Chantal Durette, Caroline Rulleau, Joel Lanoix, Jean-David Larouche, Marie-Pierre Hardy, Krystel Vincent, Anca Apavaloaei, Leslie Hesnard, Céline M. Laumont, Jean-Sébastien Delisle, Claude Perreault, Nandita Noronha

المساهمون: Ehx, G., Larouche, J. -D., Durette, C., Laverdure, J. -P., Hesnard, L., Vincent, K., Hardy, M. -P., Theriault, C., Rulleau, C., Lanoix, J., Bonneil, E., Feghaly, A., Apavaloaei, A., Noronha, N., Laumont, C. M., Delisle, J. -S., Vago, L., Hebert, J., Sauvageau, G., Lemieux, S., Thibault, P., Perreault, C.

المصدر: Immunity. 54(4)

مصطلحات موضوعية: 0301 basic medicine, immunopeptidome, medicine.medical_treatment, Mice, SCID, Epitope, Epigenesis, Genetic, Epitopes, Mice, 0302 clinical medicine, Cancer immunotherapy, Mice, Inbred NOD, hemic and lymphatic diseases, Immunology and Allergy, Cytotoxic T cell, mass spectrometry, biology, Myeloid leukemia, major histocompatibility complex, non-canonical translation, Leukemia, Myeloid, Acute, Infectious Diseases, 030220 oncology & carcinogenesis, Neoplastic Stem Cells, Immunotherapy, tumor-specific, intron, Immunology, Receptors, Antigen, T-Cell, acute myeloid leukemia, Major histocompatibility complex, Cell Line, 03 medical and health sciences, antigen, Antigen, Antigens, Neoplasm, MHC class I, medicine, Animals, Humans, cancer immunotherapy, Histocompatibility Antigens Class I, antigen discovery, 030104 developmental biology, CD8 T cell, Immunoediting, Mutation, Cancer research, biology.protein, T-Lymphocytes, Cytotoxic

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3ea5da67884e96cfb20df5a75499300f
https://pubmed.ncbi.nlm.nih.gov/33852826

المؤلفون: Jenna Cleyle, Marie-Pierre Hardy, Robin Minati, Mathieu Courcelles, Chantal Durette, Joel Lanoix, Jean-Philippe Laverdure, Krystel Vincent, Claude Perreault, Pierre Thibault

المصدر: Molecular & Cellular Proteomics. 21:100228

مصطلحات موضوعية: Antigens, Neoplasm, Histocompatibility Antigens Class I, Humans, Microsatellite Instability, Immunotherapy, Colorectal Neoplasms, Peptides, Immune Checkpoint Inhibitors, Molecular Biology, Biochemistry, Analytical Chemistry

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e8d58ed6725f2f1a831f254b6bb2b71e
https://doi.org/10.1016/j.mcpro.2022.100228

المؤلفون: Marie-Pierre Hardy, Jean-Philippe Laverdure, Krystel Vincent, Anca Apavaloaei, Chantal Durette, Pierre Thibault, Joel Lanoix, Claude Perreault, Jean-David Larouche, Qingchuan Zhao

المصدر: Cancer Immunology Research. 8:B16-B16

مصطلحات موضوعية: Cancer Research, Antigen, Immunology, Tumor specific, Identification (biology), Biology, Induced pluripotent stem cell, Cell biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::3d692ae80506994ef8e9501161c0edc4
https://doi.org/10.1158/2326-6074.tumimm19-b16

المؤلفون: Charles St-Pierre, Eric Bonneil, Leslie Hesnard, Jean-Philippe Laverdure, Joel Lanoix, Chantal Durette, Céline M. Laumont, Éric Audemard, Marie-Pierre Hardy, Krystel Vincent, Suzanne Vobecky, Mathieu Courcelles, Claude Perreault, Mohamed Benhammadi, Elie Haddad, Caroline Côté, Patrick Gendron, Pierre Thibault, Sébastien Lemieux

المصدر: Science translational medicine. 10(470)

مصطلحات موضوعية: 0301 basic medicine, medicine.medical_treatment, T-Lymphocytes, Tumor specific, Computational biology, Biology, 03 medical and health sciences, Interferon-gamma, Cancer immunotherapy, Antigen, Antigens, Neoplasm, Cell Line, Tumor, Neoplasms, MHC class I, medicine, Animals, Humans, Amino Acid Sequence, Exome, Proteogenomics, Mice, Inbred BALB C, Repertoire, General Medicine, Mice, Inbred C57BL, 030104 developmental biology, Cell culture, Protein Biosynthesis, biology.protein, DNA, Intergenic, Immunization, Peptides

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4615f6c3cd291c840dc3b548765e1a92
https://pubmed.ncbi.nlm.nih.gov/30617268

المؤلفون: Émilie Cossette, Pierre Thibault, Caroline Côté, Simon Comtois-Marotte, Marie-Pierre Hardy, Mathieu Courcelles, Claude Perreault, Joel Lanoix, Chantal Durette

المصدر: Proteomics. 18(12)

مصطلحات موضوعية: 0301 basic medicine, Nonsynonymous substitution, Adult, Male, Immunoprecipitation, Peptide, Computational biology, Mice, SCID, Major histocompatibility complex, Biochemistry, 03 medical and health sciences, Mice, 0302 clinical medicine, Mice, Inbred NOD, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma, MHC class I, Minor histocompatibility antigen, medicine, Animals, Humans, Molecular Biology, B cell, Cells, Cultured, chemistry.chemical_classification, B-Lymphocytes, biology, Lymphoblast, Histocompatibility Antigens Class I, Peptide Fragments, 030104 developmental biology, medicine.anatomical_structure, chemistry, 030220 oncology & carcinogenesis, biology.protein, Acids

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aa92ce2f6eb02a66c44e5a7fa5bd4035
https://pubmed.ncbi.nlm.nih.gov/29508533

المؤلفون: Céline M. Laumont, Krystel Vincent, Leslie Hesnard, Éric Audemard, Éric Bonneil, Jean-Philippe Laverdure, Patrick Gendron, Mathieu Courcelles, Marie-Pierre Hardy, Caroline Côté, Chantal Durette, Charles St-Pierre, Mohamed Benhammadi, Joël Lanoix, Suzanne Vobecky, Élie Haddad, Sébastien Lemieux, Pierre Thibault, Claude Perreault

مصطلحات موضوعية: RNA-sequencing, k-mers, Mass spectrometry, Identification of tumor-specific antigens, Thymic epithelial cells, MHC class I

Relation: https://doi.org/10.5281/zenodo.1484260; https://doi.org/10.5281/zenodo.1484261; oai:zenodo.org:1484261

الاتاحة: https://doi.org/10.5281/zenodo.1484261

المؤلفون: Céline M. Laumont, Krystel Vincent, Leslie Hesnard, Éric Audemard, Éric Bonneil, Jean-Philippe Laverdure, Patrick Gendron, Mathieu Courcelles, Marie-Pierre Hardy, Caroline Côté, Chantal Durette, Charles St-Pierre, Mohamed Benhammadi, Joël Lanoix, Suzanne Vobecky, Elie Haddad, Sébastien Lemieux, Pierre Thibault, Claude Perreault

مصطلحات موضوعية: RNA-sequencing, k-mers, Mass spectrometry, Identification of tumor-specific antigens Thymic epithelial cells MHC class I, Thymic epithelial cells, MHC class I

Relation: https://doi.org/10.5281/zenodo.1484485; https://doi.org/10.5281/zenodo.1484486; oai:zenodo.org:1484486

الاتاحة: https://doi.org/10.5281/zenodo.1484486

المؤلفون: Teresa Costa, Victor L. Sousa, Júlia Costa, Tommy Nilsson, Joel Lanoix, Catarina Brito

المصدر: Journal of Biological Chemistry. 278:7624-7629

مصطلحات موضوعية: Glutamine, Amino Acid Motifs, Blotting, Western, Mutant, Golgi Apparatus, Biology, Kidney, Biochemistry, symbols.namesake, Cricetinae, Baby hamster kidney cell, Animals, Humans, Biotinylation, Cysteine, Disulfides, Fluorescent Antibody Technique, Indirect, Cell adhesion, Molecular Biology, Cells, Cultured, chemistry.chemical_classification, Vesicle, Cell Membrane, Cell Biology, Golgi apparatus, Fucosyltransferases, Protein Structure, Tertiary, Microscopy, Electron, Protein Transport, Transmembrane domain, Enzyme, Microscopy, Fluorescence, Membrane protein, chemistry, symbols, Tyrosine, Dimerization, Plasmids, Subcellular Fractions

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5b31048fa6efeef9b6df121c9f40d42
https://doi.org/10.1074/jbc.m209325200