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1Academic Journal
المؤلفون: Felix Simkovic, Jens M. H. Thomas, Ronan M. Keegan, Martyn D. Winn, Olga Mayans, Daniel J. Rigden
المصدر: IUCrJ, Vol 3, Iss 4, Pp 259-270 (2016)
مصطلحات موضوعية: molecular replacement, protein structure prediction, evolutionary covariation, predicted contacts, ab initio modelling, Crystallography, QD901-999
وصف الملف: electronic resource
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2Academic Journal
المؤلفون: Jens M. H. Thomas, Ronan M. Keegan, Jaclyn Bibby, Martyn D. Winn, Olga Mayans, Daniel J. Rigden
المصدر: IUCrJ, Vol 2, Iss 2, Pp 198-206 (2015)
مصطلحات موضوعية: molecular replacement, ab initio modelling, coiled-coil proteins, search-model ensembles, macromolecular complexes, Crystallography, QD901-999
وصف الملف: electronic resource
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3Academic Journal
المؤلفون: Francis J. Baumont de Oliveira, Scott Ferson, Ronald A. D. Dyer, Jens M. H. Thomas, Paul D. Myers, Nicholas G. Gray
المصدر: Sustainability; Volume 14; Issue 9; Pages: 5676
مصطلحات موضوعية: financial risk assessment, vertical farming, urban agriculture, probability bounds analysis, economic viability
جغرافية الموضوع: agris
وصف الملف: application/pdf
Relation: https://dx.doi.org/10.3390/su14095676
الاتاحة: https://doi.org/10.3390/su14095676
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4
المؤلفون: Adam J. Simpkin, Jens M. H. Thomas, Ronan M. Keegan, Daniel J. Rigden
المصدر: Acta Crystallographica Section D Structural Biology. 78:553-559
مصطلحات موضوعية: Models, Molecular, Protein Domains, Structural Biology, Proteins, Databases, Protein, Protein Structure, Secondary
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5
المؤلفون: Eugene Krissinel, Andrey A. Lebedev, Ville Uski, Charles B. Ballard, Ronan M. Keegan, Oleg Kovalevskiy, Robert A. Nicholls, Navraj S. Pannu, Pavol Skubák, John Berrisford, Maria Fando, Bernhard Lohkamp, Marcin Wojdyr, Adam J. Simpkin, Jens M. H. Thomas, Christopher Oliver, Clemens Vonrhein, Grzegorz Chojnowski, Arnaud Basle, Andrew Purkiss, Michail N. Isupov, Stuart McNicholas, Edward Lowe, Josep Triviño, Kevin Cowtan, Jon Agirre, Daniel J. Rigden, Isabel Uson, Victor Lamzin, Ivo Tews, Gerard Bricogne, Andrew G. W. Leslie, David G. Brown
المساهمون: Biotechnology and Biological Sciences Research Council (UK), Medical Research Council (UK)
مصطلحات موضوعية: Chemical Biology & High Throughput, Structural Biology, Project management, Macromolecular Substances, Cloud Computing, CCP4, Crystallography, X-Ray, Macromolecular crystallography, Data management, Distributed computing, Software, Structural Biology & Biophysics, CCP4 Cloud
وصف الملف: text; application/pdf
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6
المؤلفون: Daniel J. Rigden, Adam J. Simpkin, Ronan M. Keegan, Jens M. H. Thomas
مصطلحات موضوعية: Structure (mathematical logic), Database, Computer science, Search model, Rank (computer programming), Protein Data Bank (RCSB PDB), Molecular replacement, Decision process, computer.software_genre, computer, Protein secondary structure, Pipeline (software)
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7
المؤلفون: Jens M. H. Thomas, Ronan M. Keegan, Daniel J. Rigden, Owen R. Davies
المصدر: ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY
Thomas, J M H, Keegan, R M, Rigden, D J & Davies, O R 2020, ' Extending the scope of coiled-coil crystal structure solution by AMPLE through improved ab initio modelling ', Acta Crystallographica Section D: Structural Biology, pp. 272-284 . https://doi.org/10.1107/S2059798320000443
Acta Crystallographica. Section D, Structural Biologyمصطلحات موضوعية: Models, Molecular, Protein Conformation, alpha-Helical, Materials science, Physics::Medical Physics, Protein Data Bank (RCSB PDB), Ab initio, coiled-coils, Phase problem, Crystallography, X-Ray, Antiparallel (biochemistry), Protein Structure, Secondary, 03 medical and health sciences, AMPLE, Protein structure, Structural Biology, Molecular replacement, phasing, 030304 developmental biology, Coiled coil, Quantitative Biology::Biomolecules, 0303 health sciences, 030302 biochemistry & molecular biology, Proteins, molecular replacement, Phaser, Peptide Fragments, Chemical physics, Ccp4, Software
وصف الملف: application/pdf
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8
المؤلفون: Jens M. H. Thomas, Martin Savko, Charles Ballard, Daniel J. Rigden, William Shepard, Marcin Wojdyr, Ronan M. Keegan, Andrey Lebedev, Felix Simkovic, Adam J. Simpkin, Ville Uski
المصدر: Acta Crystallographica. Section D, Structural Biology
مصطلحات موضوعية: 0301 basic medicine, Models, Molecular, Computer science, Protein Conformation, Pipeline (computing), ensembles, Crystal (programming language), 03 medical and health sciences, 0302 clinical medicine, Structural Biology, structure solution, Sensitivity (control systems), Databases, Protein, molecular-replacement pipeline, Sequence, Crystallography, SIMBAD, Proteins, sequence independent, Phaser, 3. Good health, Identification (information), 030104 developmental biology, Test case, contaminants, Ccp4, Algorithm, 030217 neurology & neurosurgery, Software
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9
المصدر: ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY
Acta Crystallographica. Section D, Structural Biologyمصطلحات موضوعية: Models, Molecular, databases, Protein Conformation, Computer science, Pipeline (computing), Ab initio, ab initio structure predictions, Scale (descriptive set theory), Phase problem, Crystallography, X-Ray, computer.software_genre, 03 medical and health sciences, Structural Biology, Molecular replacement, Databases, Protein, 030304 developmental biology, Structure (mathematical logic), 0303 health sciences, Database, 030302 biochemistry & molecular biology, Proteins, molecular replacement, 3. Good health, Range (mathematics), Gremlin (programming language), ab initio modelling, Ccp4, computer, Algorithms, Software
وصف الملف: application/pdf
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10
المؤلفون: Patrick Heasman, L. Turner, Abbie Trewin, Jens M. H. Thomas, Pierre Fayon, C. Mollart
المصدر: The journal of physical chemistry. B. 124(33)
مصطلحات موضوعية: Battery (electricity), Supercapacitor, Materials science, Rational design, Sonogashira coupling, food and beverages, Nanotechnology, Surfaces, Coatings and Films, Conjugated microporous polymer, Catalysis, Amorphous solid, Membrane, Materials Chemistry, Physical and Theoretical Chemistry
وصف الملف: text
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11
المؤلفون: Jens M. H. Thomas, Olga Mayans, Daniel J. Rigden, Ronan M. Keegan, Martyn Winn, Felix Simkovic, Adam J. Simpkin
المصدر: Acta Crystallographica. Section D, Structural Biology
مصطلحات موضوعية: Models, Molecular, 0301 basic medicine, Protein Conformation, Computer science, search-model ensembles, Phase problem, Crystallography, X-Ray, Set (abstract data type), 03 medical and health sciences, AMPLE, Structural Biology, ddc:570, Humans, Computer Simulation, Molecular replacement, distant homologues, Structure (mathematical logic), 030102 biochemistry & molecular biology, Basis (linear algebra), CONCOORD, Proteins, Research Papers, molecular replacement, Pipeline (software), Range (mathematics), 030104 developmental biology, Test case, Algorithm, Software
وصف الملف: application/pdf
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12
المؤلفون: Daniel J. Rigden, Ville Uski, Ronan M. Keegan, Stuart McNicholas, Martyn Winn, Keith S. Wilson, Felix Simkovic, Adam J. Simpkin, Jens M. H. Thomas, Charles Ballard
المصدر: ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY
Acta Crystallographica. Section D, Structural Biologyمصطلحات موضوعية: Models, Molecular, 0301 basic medicine, Service (systems architecture), Exploit, Protein Conformation, Process (engineering), Computer science, Crystallography, X-Ray, computer.software_genre, Computer graphics, 03 medical and health sciences, 0302 clinical medicine, Software, Software Design, Structural Biology, Computer Graphics, Humans, Computer Simulation, automated structure solution, CCP4 pipeline, business.industry, MrBUMP, Proteins, Research Papers, molecular replacement, Pipeline (software), 030104 developmental biology, Software design, Data mining, business, Model building, computer, 030217 neurology & neurosurgery
وصف الملف: application/pdf; application/wps-office.docx
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13
المؤلفون: Jens M. H. Thomas, Olga Mayans, Chengxin Zhang, Yang Zhang, Ronan M. Keegan, Daniel J. Rigden, Felix Simkovic
المصدر: Acta Crystallographica. Section D, Structural Biology
مصطلحات موضوعية: inorganic chemicals, Models, Molecular, Protein Conformation, alpha-Helical, 0301 basic medicine, ab initio phasing, information science, Ab initio, Crystallography, X-Ray, Quantitative Biology::Subcellular Processes, Condensed Matter::Materials Science, 03 medical and health sciences, Mathematics::K-Theory and Homology, transmembrane proteins, Structural Biology, Computational chemistry, ddc:570, ab initio modelling, predicted contacts, Physics::Atomic and Molecular Clusters, Humans, natural sciences, Computer Simulation, Molecular replacement, Physics, Quantitative Biology::Biomolecules, Ideal (set theory), Cell Membrane, Membrane Proteins, Research Papers, Transmembrane protein, 030104 developmental biology, α helical, Chemical physics, Search model, biological sciences, health occupations, Algorithms, Software
وصف الملف: application/pdf
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14
المؤلفون: Adam J. Simpkin, Jens M. H. Thomas, Ronan M. Keegan, Daniel J. Rigden
المصدر: Acta Crystallographica Section A Foundations and Advances. 77:C688-C688
مصطلحات موضوعية: Inorganic Chemistry, Structural Biology, General Materials Science, Physical and Theoretical Chemistry, Condensed Matter Physics, Biochemistry
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15
المؤلفون: Jens M. H. Thomas, Abbie Trewin, Pierre Fayon
المصدر: The Journal of Physical Chemistry C. 120:25880-25891
مصطلحات موضوعية: Chemistry, Nanoporous, Diffusion, Inorganic chemistry, 02 engineering and technology, Microporous material, Electrolyte, 010402 general chemistry, 021001 nanoscience & nanotechnology, 01 natural sciences, 0104 chemical sciences, Surfaces, Coatings and Films, Electronic, Optical and Magnetic Materials, Ion, Amorphous solid, General Energy, Chemical engineering, Melting point, Physical and Theoretical Chemistry, 0210 nano-technology, Mesoporous material
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16
المؤلفون: Jens M. H. Thomas, Felix Simkovic, Daniel J. Rigden
المصدر: Bioinformatics
BIOINFORMATICSمصطلحات موضوعية: 0301 basic medicine, Statistics and Probability, Computer science, computer.software_genre, Biochemistry, Extensibility, Computational science, 03 medical and health sciences, User-Computer Interface, Amino Acid Sequence, Molecular Biology, computer.programming_language, Programming language, business.industry, Proteins, Python (programming language), Modular design, File format, Applications Notes, Computer Science Applications, Computational Mathematics, 030104 developmental biology, Computational Theory and Mathematics, business, computer, Sequence Analysis, Sequence Alignment, Algorithms, Software
وصف الملف: application/wps-office.doc
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المؤلفون: Jens M. H. Thomas, Alejandro Buschiazzo, Charles Ballard, Yibin Xu, Ronan M. Keegan, Felix Simkovic, Martin Savko, Marcin Wojdyr, William Shepard, Adam J. Simpkin, Rui Wu, Daniel J. Rigden, Ruslan Sanishvili, María-Natalia Lisa, Andrey Lebedev, Ville Uski
المساهمون: University of Liverpool, Synchrotron SOLEIL (SSOLEIL), Centre National de la Recherche Scientifique (CNRS), STFC Rutherford Appleton Laboratory (RAL), Science and Technology Facilities Council (STFC), Global Phasing Ltd, Weill Medical College of Cornell University [New York], Argonne National Laboratory [Lemont] (ANL), University of Melbourne, The Walter and Eliza Hall Institute of Medical Research (WEHI), Molecular and structural microbiology / Microbiología Molecular y Estructural [Montevideo], Institut Pasteur de Montevideo, Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP), The development of SIMBAD has been supported by the BBSRC CCP4 grant BB/L009544/1, the University of Liverpool and Synchrotron SOLEIL. GM/CA@APS has been funded in whole or in part with Federal funds from the National Cancer Institute (ACB-12002) and the National Institute of General Medical Sciences (AGM-12006). This research used resources of the Advanced Photon Source, a US Department of Energy (DOE) Office of Science User Facility operated for the DOE Office of Science by Argonne National Laboratory under Contract No. DE-AC02-06CH11357. The work on cytokine/cyanase was supported by grant APP1004945 from the Australian National Health and Medical Research Council (NHMRC) and was made possible at WEHI through Victorian State Government Operational Infrastructure Support and the Australian NHMRC Independent Research Institutes Infrastructure Support Scheme. M-NL received a postdoctoral fellowship from the ANII (Agencia Nacional de Investigación e Innovación, Uruguay).
المصدر: Acta crystallographica. Section D, Structural biology
Acta crystallographica. Section D, Structural biology, International Union of Crystallography, 2018, 74 (7), pp.595-605. ⟨10.1107/S2059798318005752⟩
Acta Crystallographica. Section D, Structural Biology
Acta Crystallographica Section D: Structural Biologyمصطلحات موضوعية: 0301 basic medicine, Models, Molecular, CONTAMINANT, Computer science, MOLECULAR REPLACEMENT PIPELINE, Protein Data Bank (RCSB PDB), 010403 inorganic & nuclear chemistry, Crystallography, X-Ray, lattice search, 01 natural sciences, molecular replacement pipeline, Ciencias Biológicas, 03 medical and health sciences, Software, Structural Biology, Lattice (order), structure solution, [CHIM.CRIS]Chemical Sciences/Cristallography, LATTICE SEARCH, Molecular replacement, Amino Acid Sequence, Databases, Protein, business.industry, STRUCTURE SOLUTION, Macromolecular crystallography, SIMBAD, fungi, food and beverages, computer.file_format, Bioquímica y Biología Molecular, Protein Data Bank, Research Papers, 3. Good health, 0104 chemical sciences, 030104 developmental biology, Search model, business, Crystallization, contaminant, Algorithm, computer, CIENCIAS NATURALES Y EXACTAS, Algorithms
وصف الملف: application/pdf; application/wps-office.docx
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18
المساهمون: School of Biological Sciences
المصدر: PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
مصطلحات موضوعية: Models, Molecular, 0301 basic medicine, Protein Folding, Stereochemistry, Protein design, Antimicrobial peptides, Ab initio, Peptide, Histatins, Biochemistry, Amphibian Proteins, Protein Structure, Secondary, Structure-Activity Relationship, 03 medical and health sciences, Bacteriocins, Structural Biology, Humans, Amino Acid Sequence, Disulfides, Molecular Biology, chemistry.chemical_classification, Ant Venoms, Protein Stability, Antimicrobial Peptide, Ab Initio Modeling, Biological sciences [Science], Microcin, Antimicrobial, 030104 developmental biology, chemistry, Intramolecular force, Histatin, Peptides, Antimicrobial Cationic Peptides
وصف الملف: application/wps-office.docx; application/pdf
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المؤلفون: Jens M. H. Thomas, Abbie Trewin
المصدر: The Journal of Physical Chemistry C. 118:19712-19722
مصطلحات موضوعية: Generation process, General Energy, Materials science, Rational design, Network structure, Gas uptake, Nanotechnology, Physical and Theoretical Chemistry, Porosity, Surfaces, Coatings and Films, Electronic, Optical and Magnetic Materials, Amorphous solid, Network formation
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المصدر: Acta Crystallographica Section A Foundations and Advances. 75:e183-e183
مصطلحات موضوعية: Inorganic Chemistry, Structure (mathematical logic), Structural Biology, Computer science, General Materials Science, Molecular replacement, Computational biology, Physical and Theoretical Chemistry, Condensed Matter Physics, Biochemistry