المؤلفون: Ying Jin, Xiaoyu An, Binchen Mao, Ruilin Sun, Rajendra Kumari, Xiaobo Chen, Yongli Shan, Mingfa Zang, Ling Xu, Jan Muntel, Kristina Beeler, Roland Bruderer, Lukas Reiter, Sheng Guo, Demin Zhou, Qi-Xiang Li, Xuesong Ouyang

المصدر: Scientific Reports, Vol 12, Iss 1, Pp 1-18 (2022)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2045-2322

URL الوصول: https://doaj.org/article/f458fcf37994447d8b6641e56cd067f3

المؤلفون: Christoph N Schlaffner, Konstantin Kahnert, Jan Muntel, Ruchi Chauhan, Bernhard Y Renard, Judith A Steen, Hanno Steen

المصدر: eLife, Vol 9 (2020)

مصطلحات موضوعية: PTM identification, PTM quantification, label-free quantification, peptide modification, modification stoichiometry, mass spectrometry, Medicine, Science, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://elifesciences.org/articles/58783; https://doaj.org/toc/2050-084X

URL الوصول: https://doaj.org/article/342bbf4e9d90490a8302c3cd7ce97b8f

المؤلفون: Xavier Carette, John Platig, David C. Young, Michaela Helmel, Albert T. Young, Zhe Wang, Lakshmi-Prasad Potluri, Cameron Stuver Moody, Jumei Zeng, Sladjana Prisic, Joseph N. Paulson, Jan Muntel, Ashoka V. R. Madduri, Jorge Velarde, Jacob A. Mayfield, Christopher Locher, Tiansheng Wang, John Quackenbush, Kyu Y. Rhee, D. Branch Moody, Hanno Steen, Robert N. Husson

المصدر: mBio, Vol 9, Iss 2 (2018)

مصطلحات موضوعية: Mycobacterium tuberculosis, PknB, Ser/Thr protein kinase, signal transduction, two-component regulatory systems, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2150-7511

URL الوصول: https://doaj.org/article/499cf436426a467c922809513e71e00a

المؤلفون: Rebecca Schroeter, Tamara Hoffmann, Birgit Voigt, Hanna Meyer, Monika Bleisteiner, Jan Muntel, Britta Jürgen, Dirk Albrecht, Dörte Becher, Michael Lalk, Stefan Evers, Johannes Bongaerts, Karl-Heinz Maurer, Harald Putzer, Michael Hecker, Thomas Schweder, Erhard Bremer

المصدر: PLoS ONE, Vol 8, Iss 11, p e80956 (2013)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC3858371?pdf=render; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/2e1f0b83c78041f292744332716d8c23

المؤلفون: Yue Xuan, Jan Muntel, Ting Huang, Lukas Reiter, Olga Vitek, Roland Bruderer

المصدر: Molecular & Cellular Proteomics : MCP

مصطلحات موضوعية: Proteomics, Lung Neoplasms, Computer science, viruses, Combined use, Saccharomyces cerevisiae, Computational biology, Orbitrap, Biochemistry, Mass Spectrometry, Analytical Chemistry, law.invention, Mice, 03 medical and health sciences, Cancer Biomarker(s), Fragment (logic), law, Quantification, Cerebellum, Animals, Humans, Label-Free Quantification, Statistical analysis, Data-independent acquisition, Caenorhabditis elegans, Lung, Molecular Biology, 030304 developmental biology, 0303 health sciences, Lung Cancer, 030302 biochemistry & molecular biology, Technological Innovation and Resources, equipment and supplies, Label-free quantification, Data Interpretation, Statistical, SWATH-MS, Protein abundance, HeLa Cells

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::53334acdd41af236851ee20432e4621f
https://doi.org/10.1074/mcp.ra119.001705

المؤلفون: Oliver Rinner, Ornella Cominetti, Jan Muntel, Jörg Hager, Charlotte Macron, Arne Astrup, Roland Bruderer, Wim H. M. Saris, Sebastian Müller, Loïc Dayon, Armand Valsesia, Jérôme Carayol, Oliver M. Bernhardt, Lukas Reiter, Tejas Gandhi

المساهمون: RS: NUTRIM - R1 - Obesity, diabetes and cardiovascular health, Humane Biologie

المصدر: Molecular & Cellular Proteomics, 18(6):ARTN RA118.001288, 1242-1254. American Society for Biochemistry and Molecular Biology, Inc.
Molecular & Cellular Proteomics : MCP
Bruderer, R, Muntel, J, Müller, S, Bernhardt, O M, Gandhi, T, Cominetti, O, Macron, C, Carayol, J, Rinner, O, Astrup, A, Saris, W H M, Hager, J, Valsesia, A, Dayon, L & Reiter, L 2019, ' Analysis of 1508 plasma samples by capillary-flow data-independent acquisition profiles proteomics of weight loss and maintenance ', Molecular and Cellular Proteomics, vol. 18, no. 6, pp. 1242-1254 . https://doi.org/10.1074/mcp.RA118.001288

مصطلحات موضوعية: Library, Proteomics, Glycosylation, Proteome, Biochemistry, Analytical Chemistry, Absolute quantification, Glycation, Weight loss, Faculty of Science, High throughput, data-independent acquisition, Stable isotope-based quantification, Data-independent acquisition, PEPTIDE, Biomarker discovery, Databases, Protein, stable isotope standards, 0303 health sciences, Chemistry, Single shot, 030302 biochemistry & molecular biology, Blood Proteins, Reference Standards, BIOMARKER DISCOVERY, Isotope Labeling, Biomarker (medicine), medicine.symptom, Rheology, SWATH, Adult, EXPRESSION, PROTEINS, Clinical proteomics, Plasma proteomics, high throughput, Computational biology, VALIDATION, 03 medical and health sciences, Weight Loss, Label-free quantification, medicine, Humans, RATES, Molecular Biology, 030304 developmental biology, RECEPTOR, Research, Plasma or serum analysis, MASS-SPECTROMETRY, single shot, clinical proteomics, SWATH-MS

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e33a040f9603a6db3ea619215d48a53d
https://doi.org/10.1074/mcp.ra118.001288

المؤلفون: Marie-Therese Mackmull, Luise Nagel, Fabian Sesterhenn, Jan Muntel, Jan Grossbach, Patrick Stalder, Roland Bruderer, Lukas Reiter, Wilma D. J. van de Berg, Natalie de Souza, Andreas Beyer, Paola Picotti

المساهمون: Anatomy and neurosciences, Amsterdam Neuroscience - Neurodegeneration

المصدر: Nature structural & molecular biology, 29(10), 978-+. Nature Publishing Group
Nature Structural & Molecular Biology
Mackmull, M-T, Nagel, L, Sesterhenn, F, Muntel, J, Grossbach, J, Stalder, P, Bruderer, R, Reiter, L, van de Berg, W D J, de Souza, N, Beyer, A & Picotti, P 2022, ' Global, in situ analysis of the structural proteome in individuals with Parkinson's disease to identify a new class of biomarker ', Nature structural & molecular biology, vol. 29, no. 10, pp. 978-+ . https://doi.org/10.1038/s41594-022-00837-0
Nature Structural & Molecular Biology, 29 (10)

مصطلحات موضوعية: Proteome, Structural Biology, alpha-Synuclein, Humans, Neurodegenerative Diseases, Parkinson Disease, Molecular Biology, Biomarkers

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fa361b9f1cb603469205c20192ec8fe6
https://doi.org/10.1038/s41594-022-00837-0

المؤلفون: Ying Jin, Xiaoyu An, Binchen Mao, Ruilin Sun, Rajendra Kumari, Xiaobo Chen, Yongli Shan, Mingfa Zang, Ling Xu, Jan Muntel, Kristina Beeler, Roland Bruderer, Lukas Reiter, Sheng Guo, Demin Zhou, Qi-Xiang Li, Xuesong Ouyang

المصدر: Scientific reports. 12(1)

مصطلحات موضوعية: Mice, Multidisciplinary, Lymphocytes, Tumor-Infiltrating, Cell Line, Tumor, Tumor Microenvironment, Animals, Humans, chemical and pharmacologic phenomena, Antineoplastic Agents, Immunotherapy, CD8-Positive T-Lymphocytes, T-Lymphocytes, Regulatory

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5ecfed92743c85c022d70cf732836afb
https://pubmed.ncbi.nlm.nih.gov/35228603

المؤلفون: Saima Ahmed, Oludare A. Odumade, Patrick van Zalm, Kinga K. Smolen, Kimino Fujimura, Jan Muntel, Melissa S. Rotunno, Abigail B. Winston, Judith A. Steen, Richard B. Parad, Linda J. Van Marter, Stella Kourembanas, Hanno Steen

المصدر: Neonatology

مصطلحات موضوعية: Proteomics, Proteome, Pediatrics, Perinatology and Child Health, Infant, Newborn, Humans, Infant, Gestational Age, Biomarkers, Article, Developmental Biology, Body Fluids, Bronchopulmonary Dysplasia

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e0c9f0f66fe875c9927e7cd0c8fe202a
https://pubmed.ncbi.nlm.nih.gov/35073553

المؤلفون: Marco Tognetti, Kamil Sklodowski, Sebastian Mueller, Dominique Kamber, Jan Muntel, Yuehan Feng, Roland Bruderer, Lukas Reiter

المصدر: Cancer Research. 82:3920-3920

مصطلحات موضوعية: Cancer Research, Oncology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::723750245b623ae130dae166a727bb96
https://doi.org/10.1158/1538-7445.am2022-3920

المؤلفون: Kenneth S. Kosik, Shuko Takeda, Simon Dujardin, Bruce L. Miller, William W. Seeley, Hanno Steen, Pieter Beerepoot, Lea T. Grinberg, Sabina Berretta, Waltraud Mair, Long Cheng, Peter Davies, Bradley T. Hyman, Melissa S. Rotunno, Christoph N. Schlaffner, Hendrik Wesseling, Judith A. Steen, Shaojun Tang, Jan Muntel, Benoit Fatou, Mukesh Kumar, Amanda J. Guise, John C. Hedreen

المصدر: Cell, vol 183, iss 6
Cell

مصطلحات موضوعية: Aging, absolute quantification, Protein aggregation, Neurodegenerative, medicine.disease_cause, Proteomics, Alzheimer's Disease, Medical and Health Sciences, Cohort Studies, 0302 clinical medicine, Protein Isoforms, 2.1 Biological and endogenous factors, Aetiology, 0303 health sciences, Principal Component Analysis, biology, Proteopathy, Biological Sciences, Neurological, Disease Progression, Binding domain, Gene isoform, multiple reaction monitoring, Tau protein, Quantitative proteomics, tau Proteins, Computational biology, quantitative mass spectrometry, General Biochemistry, Genetics and Molecular Biology, Article, protein aggregation, 03 medical and health sciences, disease progression, proteomics, Alzheimer Disease, medicine, post-translational modifications, Acquired Cognitive Impairment, Humans, Protein Processing, proteopathy, 030304 developmental biology, C-terminus, Post-Translational, Neurosciences, Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD), Brain Disorders, prion-like molecules, FLEXITau, Case-Control Studies, biology.protein, Dementia, Protein Processing, Post-Translational, 030217 neurology & neurosurgery, Developmental Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::832d36eeb5bf7b69718acb852e7afa3b
https://escholarship.org/uc/item/3qm9841c

المؤلفون: Ruchi Chauhan, Jan Muntel, Christoph N Schlaffner, Konstantin Kahnert, Bernhard Y. Renard, Hanno Steen, Judith A. Steen

المصدر: eLife
eLife, Vol 9 (2020)

مصطلحات موضوعية: Proteomics, Computer science, QH301-705.5, Systems biology, Science, Quantitative proteomics, Chemical biology, PTM quantification, Computational biology, General Biochemistry, Genetics and Molecular Biology, label-free quantification, Biochemistry and Chemical Biology, Humans, ddc:610, Biology (General), peptide modification, modification stoichiometry, mass spectrometry, Peptide modification, General Immunology and Microbiology, Label free proteomics, General Neuroscience, General Medicine, Tools and Resources, Label-free quantification, PTM identification, Posttranslational modification, Linear Models, Medicine, 610 Medizin und Gesundheit, Peptides, Function (biology), Algorithms, Software, Computational and Systems Biology, Human, HeLa Cells

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7780ecdfe202d4d7ad6f15e0ecec2913
http://europepmc.org/articles/PMC7721442

المؤلفون: Ting Huang, Erik Verschueren, Yasset Perez-Riverol, Bernd Wollscheid, Ruth Hüttenhain, Jeremy Carver, Eduard Sabidó, Olga Vitek, Tom Dunkley, Guo Ci Teo, Oliver M. Bernhardt, Benjamin Pullman, Nuno Bandeira, Maria P. Pavlou, Lukas Reiter, Meena Choi, Cristina Chiva, Jan Muntel, Manuel Tzouros, Tsung-Heng Tsai, Alexey I. Nesvizhskii, Maik Müller, Sandra Goetze

المصدر: Nature Methods, 17 (10)
Nature methods
Nature Methods

مصطلحات موضوعية: Proteomics, Computer science, Saccharomyces cerevisiae, Information repository, computer.software_genre, Mass spectrometry, Data publication and archiving, Biochemistry, Article, Mass Spectrometry, Fungal Proteins, 03 medical and health sciences, Data acquisition, Databases, Protein, Molecular Biology, 030304 developmental biology, 0303 health sciences, Reproducibility of Results, Experimental data, Cell Biology, Metadata, Workflow, ComputingMethodologies_PATTERNRECOGNITION, Quantitative analysis (finance), Data mining, computer, Algorithms, Software, Biotechnology

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d09560dbcf39706572c935962940d6e9
https://hdl.handle.net/20.500.11850/443807

المؤلفون: Bernhard Y. Renard, Judith A. Steen, Jan Muntel, Christoph N Schlaffner, Konstantin Kahnert, Ruchi Chauhan, Hanno Steen

مصطلحات موضوعية: Chemistry, Label free proteomics, Posttranslational modification, Computational biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::1827332eeb8de9c35fb3df602ea97d9c
https://doi.org/10.7554/elife.58783.sa2

المؤلفون: Isaac E. Stillman, Mukesh Kumar, Jan Muntel, Di Feng, Seth L. Alper, Susan B. Gurley, Johannes Schlondorff, Donald E. Ingber, Hanno Steen, Susan Marquez, Saima Ahmed, Gabriel Birrane, Martin R. Pollak, Carlos F. Ng, Richard M. Novak, Tom Ferrante, Lai Ding, Minxian Wang

المصدر: J Am Soc Nephrol

مصطلحات موضوعية: Male, macromolecular substances, Nephrectomy, Podocyte, Mice, Focal segmental glomerulosclerosis, Transforming Growth Factor beta, Lab-On-A-Chip Devices, medicine, Extracellular, Serine, Albuminuria, Animals, Humans, Actinin, Phosphorylation, Cells, Cultured, Kidney, Chemistry, Glomerulosclerosis, Focal Segmental, Podocytes, Wild type, Glomerulosclerosis, General Medicine, medicine.disease, Actins, Cell biology, medicine.anatomical_structure, Basic Research, Glucose, Renal pathology, Nephrology, Female, Peptidomimetics, Protein Processing, Post-Translational, Protein Binding

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::52dd5490ab5aca36acd36f12b972b121
https://europepmc.org/articles/PMC7351002/

المؤلفون: Ruchi Chauhan, Hanno Steen, Jan Muntel, Bernhard Y. Renard, Christoph N Schlaffner, Konstantin Kahnert, Judith A. Steen

مصطلحات موضوعية: 0303 health sciences, 03 medical and health sciences, Protein regulation, Computer science, Label free proteomics, 030302 biochemistry & molecular biology, Quantitative proteomics, Posttranslational modification, Computational biology, Anaphase-promoting complex, Function (biology), 030304 developmental biology, Robust regression

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d88d8346b4d1ac41c4b08471e19b790a

المؤلفون: Roland Bruderer, Jan Muntel, Melanie Thelen, Jasjot Singh, Lukas Reiter, Edgar Kaade, Dominic Winter

المصدر: Journal of proteome research. 19(1)

مصطلحات موضوعية: 0301 basic medicine, Proteomics, Immunoprecipitation, Biochemistry, Workflow, 03 medical and health sciences, Lysosome, Organelle, Hydrolase, medicine, Centrifugation, Density Gradient, Humans, Data-independent acquisition, Centrifugation, 030102 biochemistry & molecular biology, Chemistry, Lysosome-Associated Membrane Glycoproteins, Membrane Proteins, Proteins, General Chemistry, Cell biology, 030104 developmental biology, medicine.anatomical_structure, HEK293 Cells, Magnetic Iron Oxide Nanoparticles, Lysosomes, Function (biology)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2a28ef3eb9c91671e20a041ec5b08940
https://pubmed.ncbi.nlm.nih.gov/31738065

المؤلفون: Lukas Reiter, Lynn Verbeke, Oliver M. Bernhardt, Jan Muntel, Roland Bruderer, Tejas Gandhi, Tobias Treiber

المصدر: Molecular omics. 15(5)

مصطلحات موضوعية: Regulation of gene expression, False discovery rate, Male, Proteomics, Proteome, Cancer, Computational biology, Cell cycle, Biology, medicine.disease, Biochemistry, Mass Spectrometry, Gene Expression Regulation, Neoplastic, Testicular Neoplasms, Liquid chromatography–mass spectrometry, Genetics, medicine, Neoplastic Stem Cells, Humans, Data-independent acquisition, Molecular Biology, Transcription factor, Chromatography, Liquid

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1bce078ff438d78bcc448aedf1859a20
https://pubmed.ncbi.nlm.nih.gov/31465043

المؤلفون: Nicholas F. Dupuis, Roland Bruderer, Ying Jin, Jan Muntel, Davy Xuesong Ouyang, Haochen Yu, Yongli Shan, Wubin Qian, Annie X. An, Kristina Beeler

المصدر: Cancer Research. 80:927-927

مصطلحات موضوعية: Cancer Research, Oncology, Chemistry, Proteomic Profiling, Cancer research, Cytotoxic T cell

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::df875f0916d7ed8cb4fb98e601bff89f
https://doi.org/10.1158/1538-7445.am2020-927

المؤلفون: Lukas Reiter, Joanna Kirkpatrick, Ting Huang, Roland Bruderer, Olga Vitek, Alessandro Ori, Jan Muntel

المصدر: Journal of proteome research. 18(3)

مصطلحات موضوعية: 0301 basic medicine, Proteomics, Interlaboratory reproducibility, Proteome, Computer science, Quantitative proteomics, Biochemistry, Quantitative accuracy, Workflow, 03 medical and health sciences, Mice, Tandem Mass Spectrometry, Cerebellum, Animals, Label free, 030102 biochemistry & molecular biology, Staining and Labeling, business.industry, Pattern recognition, General Chemistry, Missing data, Isobaric labeling, 030104 developmental biology, Artificial intelligence, business, Chromatography, Liquid

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ac9d85c743f6e0c16d6ff8814ffa3f5c
https://pubmed.ncbi.nlm.nih.gov/30726097