المؤلفون: Nicholas J. Eagles (9283250), Emily E. Burke (4031003), Jacob Leonard (10735038), Brianna K. Barry (10735041), Joshua M. Stolz (10735044), Louise Huuki (4780236), BaDoi N. Phan (10735047), Violeta Larios Serrato (10735050), Everardo Gutiérrez-Millán (10735053), Israel Aguilar-Ordoñez (10573502), Andrew E. Jaffe (7534673), Leonardo Collado-Torres (10735056)

مصطلحات موضوعية: Genetics, Information Systems, RNA-seq, Pipeline, Bioconductor

Relation: https://figshare.com/articles/journal_contribution/Additional_file_4_of_SPEAQeasy_a_scalable_pipeline_for_expression_analysis_and_quantification_for_R_bioconductor-powered_RNA-seq_analyses/14526210

الاتاحة: https://doi.org/10.6084/m9.figshare.14526210.v1

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/journal_contribution/S1_Material_-/14389250

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.s001

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/journal_contribution/S1_Data_-/14389256

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.s003

المؤلفون: Nicholas J. Eagles (9283250), Emily E. Burke (4031003), Jacob Leonard (10735038), Brianna K. Barry (10735041), Joshua M. Stolz (10735044), Louise Huuki (4780236), BaDoi N. Phan (10735047), Violeta Larios Serrato (10735050), Everardo Gutiérrez-Millán (10735053), Israel Aguilar-Ordoñez (10573502), Andrew E. Jaffe (7534673), Leonardo Collado-Torres (10735056)

مصطلحات موضوعية: Genetics, Information Systems, RNA-seq, Pipeline, Bioconductor

Relation: https://figshare.com/articles/dataset/Additional_file_2_of_SPEAQeasy_a_scalable_pipeline_for_expression_analysis_and_quantification_for_R_bioconductor-powered_RNA-seq_analyses/14526204

الاتاحة: https://doi.org/10.6084/m9.figshare.14526204.v1

المؤلفون: Nicholas J. Eagles (9283250), Emily E. Burke (4031003), Jacob Leonard (10735038), Brianna K. Barry (10735041), Joshua M. Stolz (10735044), Louise Huuki (4780236), BaDoi N. Phan (10735047), Violeta Larios Serrato (10735050), Everardo Gutiérrez-Millán (10735053), Israel Aguilar-Ordoñez (10573502), Andrew E. Jaffe (7534673), Leonardo Collado-Torres (10735056)

مصطلحات موضوعية: Genetics, Information Systems, RNA-seq, Pipeline, Bioconductor

Relation: https://figshare.com/articles/dataset/Additional_file_1_of_SPEAQeasy_a_scalable_pipeline_for_expression_analysis_and_quantification_for_R_bioconductor-powered_RNA-seq_analyses/14526201

الاتاحة: https://doi.org/10.6084/m9.figshare.14526201.v1

المؤلفون: Nicholas J. Eagles (9283250), Emily E. Burke (4031003), Jacob Leonard (10735038), Brianna K. Barry (10735041), Joshua M. Stolz (10735044), Louise Huuki (4780236), BaDoi N. Phan (10735047), Violeta Larios Serrato (10735050), Everardo Gutiérrez-Millán (10735053), Israel Aguilar-Ordoñez (10573502), Andrew E. Jaffe (7534673), Leonardo Collado-Torres (10735056)

مصطلحات موضوعية: Genetics, Information Systems, RNA-seq, Pipeline, Bioconductor

Relation: https://figshare.com/articles/dataset/Additional_file_3_of_SPEAQeasy_a_scalable_pipeline_for_expression_analysis_and_quantification_for_R_bioconductor-powered_RNA-seq_analyses/14526207

الاتاحة: https://doi.org/10.6084/m9.figshare.14526207.v1

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/dataset/S2_Material_-/14389253

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.s002

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/dataset/S4_Data_-/14389265

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.s006

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/dataset/S2_Data_-/14389259

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.s004

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/figure/NM_demography_/14389277

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.g004

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/dataset/S3_Data_-/14389262

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.s005

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/figure/NM_sampling_/14389268

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.g001

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/figure/Summary_of_variant_effect_annotations_in_the_NM_catalog_/14389271

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.g002

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/dataset/NM_whole_genome_variation_summary_/14389280

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.t001

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/figure/GRCh38_variation_overview_in_NM_/14389274

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.g003

المؤلفون: Israel Aguilar-Ordoñez (10573502), Fernando Pérez-Villatoro (7536032), Humberto García-Ortiz (3129330), Francisco Barajas-Olmos (3129315), Judith Ballesteros-Villascán (10573505), Ram González-Buenfil (10573508), Cristobal Fresno (10573511), Alejandro Garcíarrubio (10573514), Juan Carlos Fernández-López (2611240), Hugo Tovar (8071259), Enrique Hernández-Lemus (286050), Lorena Orozco (180145), Xavier Soberón (444239), Enrique Morett (258261)

مصطلحات موضوعية: Genetics, Evolutionary Biology, Ecology, Infectious Diseases, Biological Sciences not elsewhere classified, PPARG, ACE, Native Mexicans, Whole genome variation, genomic data representation, SARS CoV -2 virus, variant, Single Nucleotide Variants, population level variation, Native American ancestry

Relation: https://figshare.com/articles/dataset/Heterozygosity_ratio_and_haplotype_block_length_per_population_/14389283

الاتاحة: https://doi.org/10.1371/journal.pone.0249773.t002