المؤلفون: Johnson, David, Batista, Dominique, Cochrane, Keeva, Davey, Robert, Etuk, Anthony, Gonzalez-Beltran, Alejandra, Haug, Kenneth, Izzo, Massimiliano, Larralde, Martin, Lawson, Thomas, Minotto, Alice, Moreno, Pablo, Nainala, Venkata Chandrasekhar, O'Donovan, Claire, Pireddu, Luca, Mele, Pierrick Roger, Shaw, Felix, Steinbeck, Christoph, Weber, Ralf, Sansone, Susanna-Assunta, Rocca-Serra, Philippe

المساهمون: Oxford e-Research Centre Oxford, University of Oxford, European Molecular Biology Laboratory (EMBL), Earlham Institute Norwich, STFC Rutherford Appleton Laboratory (RAL), Science and Technology Facilities Council (STFC), University of Birmingham Birmingham, Center for Advanced Studies, Research and Development in Sardinia (CRS4), Intelligence Artificielle et Apprentissage Automatique (CEA, LIST) (LI3A (CEA, LIST)), Département Métrologie Instrumentation & Information (CEA, LIST) (DM2I (CEA, LIST)), Laboratoire d'Intégration des Systèmes et des Technologies (LIST (CEA)), Direction de Recherche Technologique (CEA) (DRT (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Technologique (CEA) (DRT (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Laboratoire d'Intégration des Systèmes et des Technologies (LIST (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay, Institute for Environmental Analytical Chemistry, This work has been supported in part by European Commission Horizon 2020 programme PhenoMeNal project (grant agreement No. EC654241), UK BBSRC COPO project (Bioinformatics and Biological Resources Fund BBR grant: BB/L021390/1 BB/L024055/1, BB/L024071/1, BB/L024101/1 ), UK BBSRC Establishing commonstandards and curation practices: towards real world biosharing grant (BB/J020265/1), Wellcome Trust ISA-InterMine grants 208381/A/17/ZUK, BBSRC Sharing of metabolomics data and their analyses as Galaxy workflows through a UK-China collaboration grant (BB/M027635/1), and a UK NERC CASE Ph.D. studentshipin collaboration with GigaScience: (NE/L002493/1)., European Project: 654241,H2020,H2020-EINFRA-2014-2,PhenoMeNal(2015)

المصدر: EISSN: 2047-217X ; GigaScience ; https://hal.science/hal-04562617 ; GigaScience, 2021, 10 (9), ⟨10.1093/gigascience/giab060⟩ ; https://academic.oup.com/gigascience/article/10/9/giab060/6371038

مصطلحات موضوعية: Metadata Framework, open source community, experiment metadata, ISA software suite, user-facing Java tools, ISA-Tab, ISA framework, JSON serialization, Python library, Python object class, ISA API, metadata-handling functionality, interoperability, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], [INFO.INFO-AR]Computer Science [cs]/Hardware Architecture [cs.AR], [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS], [INFO.INFO-HC]Computer Science [cs]/Human-Computer Interaction [cs.HC]

Relation: info:eu-repo/grantAgreement//654241/EU/PhenoMeNal: A comprehensive and standardised e-infrastructure for analysing medical metabolic phenotype data/PhenoMeNal

الاتاحة: https://hal.science/hal-04562617
https://hal.science/hal-04562617v1/document
https://hal.science/hal-04562617v1/file/article_DavidJohnson.pdf
https://doi.org/10.1093/gigascience/giab060

المؤلفون: Richard L. Marchese Robinson, Mark T. D. Cronin, Andrea-Nicole Richarz, Robert Rallo

المصدر: Beilstein Journal of Nanotechnology, Vol 6, Iss 1, Pp 1978-1999 (2015)

مصطلحات موضوعية: databases, ISA-TAB-Nano, nanoinformatics, nanotoxicology, quantitative structure–activity relationship (QSAR), Technology, Chemical technology, TP1-1185, Science, Physics, QC1-999

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2190-4286

URL الوصول: https://doaj.org/article/ee1cf58238be4952856ab10e3d5aaca4

مصطلحات موضوعية: (Quantitative) structure-activity relationship, Registration, (Q)SAR approaches, Integrated Approaches to Testing and Assessment, in vitro Comet assay, (Q)SAR, NMs, SCGE, Investigation/Study/Assay Tab-delimited, Nano-EHS, European Chemicals Agency, ECHA, Joint Research Centre, Interoperable, Horizon 2020 Advisory Group for Nanotechnologies, Standard Operating Procedures, Single Cell Gel Electrophoresis, Accessible, AOP, nanomaterials, FAIR, NMBP, Olive tail moment, FAIR principles, NANORIGO and RiskGONE, MIRCA, Adverse Outcome Pathway, Findable, Advanced Materials, Nanosafety data, Biotechnology and Advanced Manufacturing and Processing, Health and Safety, SOPs, Fpg, Formamido pyrimidine glycosilase, NMBP-13-2018 projects, Organisation for Economic Co-operation and Development, ISA–Tab, JRC, Gov4Nano, OECD, Nano Environment, REACH, IATA, Genotoxicity, OTM, Minimum Information for Reporting Comet Assay, and Reusable, Evaluation Authorisation and Restriction of Chemicals

URL الوصول: https://explore.openaire.eu/search/publication?articleId=dris___00893::86bcdb4dbc48bec77753af9a2acf2e1e

المؤلفون: Bossa, Cecilia, Andreoli, Cristina, Bakker, Martine, Barone, Flavia, De Angelis, Isabella, Jeliazkova, Nina, Nymark, Penny, Battistelli, Chiara Laura

مصطلحات موضوعية: Fpg, Formamido pyrimidine glycosilase, ECHA, European Chemicals Agency, FAIR principles, (Q)SAR approaches, OECD, Organisation for Economic Co-operation and Development, JRC, Joint Research Centre, AOP, Adverse Outcome Pathway, NMBP, Horizon 2020 Advisory Group for Nanotechnologies, Advanced Materials, Biotechnology and Advanced Manufacturing and Processing, Nanosafety data, (Q)SAR, (Quantitative) structure-activity relationship, MIRCA, Minimum Information for Reporting Comet Assay, in vitro Comet assay, Nano-EHS, Nano Environment, Health and Safety, FAIR, Findable, Accessible, Interoperable, and Reusable, SOPs, Standard Operating Procedures, REACH, Registration, Evaluation Authorisation and Restriction of Chemicals, SCGE, Single Cell Gel Electrophoresis, NMBP-13-2018 projects, Gov4Nano, NANORIGO and RiskGONE, OTM, Olive tail moment, NMs, nanomaterials, ISA–Tab, Investigation/Study/Assay Tab-delimited, Genotoxicity, IATA, Integrated Approaches to Testing and Assessment, Nanomaterials

URL الوصول: https://explore.openaire.eu/search/publication?articleId=narcis______::27b4896d718550fdb50d73e6450d4291
http://hdl.handle.net/10029/625381

المؤلفون: Pietro eFranceschi, Roman eMylonas, Nir eShahaf, Matthias eScholz, Panagiotis eArapitsas, Domenico eMasuero, Georg eWeingart, Silvia eCarlin, Urska eVrhovsek, Fulvio eMattivi, Ron eWehrens

المصدر: Frontiers in Bioengineering and Biotechnology, Vol 2 (2014)

مصطلحات موضوعية: Metabolomics, LC-MS, data analysis, GC-MS, pipeline, ISA-Tab, Biotechnology, TP248.13-248.65

وصف الملف: electronic resource

Relation: http://journal.frontiersin.org/Journal/10.3389/fbioe.2014.00072/full; https://doaj.org/toc/2296-4185

URL الوصول: https://doaj.org/article/d85d0727161e48fa979448722d2e67eb

المؤلفون: Chitwood, Corey P

المصدر: Electronic Theses and Dissertations

مصطلحات موضوعية: MultiCellDS, data standard, digital cell line, digital snapshots, ISA-Tab, bioengineering, Other Biomedical Engineering and Bioengineering

وصف الملف: application/pdf

Relation: https://ir.library.louisville.edu/etd/3914; https://ir.library.louisville.edu/context/etd/article/4935/viewcontent/Conversion_of_MultiCellDS_Digital_Snapshots_to_ISA_Tab_Format.pdf

الاتاحة: https://ir.library.louisville.edu/etd/3914
https://doi.org/10.18297/etd/3914
https://ir.library.louisville.edu/context/etd/article/4935/viewcontent/Conversion_of_MultiCellDS_Digital_Snapshots_to_ISA_Tab_Format.pdf

المؤلفون: Feng Liu, Patrick König, Daniel Arend, Matthias Lange, Dennis Psaroudakis, Astrid Junker, Uwe Scholz

المصدر: F1000Research

مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, Source code, Java, Computer science, media_common.quotation_subject, Writing, Interoperability, reproducible research, 01 natural sciences, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, ISA-Tab, framework, General Pharmacology, Toxicology and Pharmaceutics, MIT License, media_common, computer.programming_language, Object-oriented programming, Metadata, FAIR data, General Immunology and Microbiology, Plain text, business.industry, Software Tool Article, object-oriented programming, General Medicine, computer.file_format, Articles, Python (programming language), 030104 developmental biology, Software engineering, business, computer, Software, 010606 plant biology & botany

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dd30d83ec0fe64bd9f0bff9042cc16c5
https://pubmed.ncbi.nlm.nih.gov/33728038

المؤلفون: Sansone Susanna-Assunta, Rocca-Serra Philippe

المصدر: GigaScience, Vol 1, Iss 1, p 10 (2012)

مصطلحات موضوعية: Standard, Ontology, Data sharing, Curation, Data policy, ISA commons, ISA-Tab, BioSharing, Computer applications to medicine. Medical informatics, R858-859.7

Relation: http://www.gigasciencejournal.com/content/1/1/10; https://doaj.org/toc/2047-217X; https://doaj.org/article/42a5b18fba28444da34f079a33177959

الاتاحة: https://doi.org/10.1186/2047-217X-1-10
https://doaj.org/article/42a5b18fba28444da34f079a33177959

المؤلفون: Dennis Psaroudakis, Daniel Arend

المساهمون: Feng Liu, Patrick König, Uwe Scholz, Astrid Junker, Matthias Lange

مصطلحات موضوعية: ISA-Tab, FAIR data, metadata, Java, object-oriented programming, framework

Relation: https://github.com/IPK-BIT/isa4j/tree/isa4j-1.0.4; https://doi.org/10.5281/zenodo.4275167; https://doi.org/10.5281/zenodo.4275168; oai:zenodo.org:4275168

الاتاحة: https://doi.org/10.5281/zenodo.4275168

المؤلفون: Andrea-Nicole Richarz, Robert Rallo, Richard L. Marchese Robinson, Mark T. D. Cronin

المصدر: Beilstein Journal of Nanotechnology
Beilstein Journal of Nanotechnology, Vol 6, Iss 1, Pp 1978-1999 (2015)

مصطلحات موضوعية: RA1190, databases, Computer science, General Physics and Astronomy, 02 engineering and technology, 010501 environmental sciences, nanoinformatics, computer.software_genre, lcsh:Chemical technology, 01 natural sciences, lcsh:Technology, Full Research Paper, Data-driven, ISA-TAB-Nano, Nanotechnology, General Materials Science, QD, lcsh:TP1-1185, Electrical and Electronic Engineering, lcsh:Science, 0105 earth and related environmental sciences, computer.programming_language, Data collection, Parsing, Business rule, lcsh:T, quantitative structure–activity relationship (QSAR), Python (programming language), 021001 nanoscience & nanotechnology, Data science, lcsh:QC1-999, Nanoscience, lcsh:Q, nanotoxicology, 0210 nano-technology, computer, Strengths and weaknesses, lcsh:Physics

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3ab294eb1d0b2522c91e9007db2b780f
http://europepmc.org/articles/PMC4660926

المؤلفون: Salek, Reza M, Haug, Kenneth, Steinbeck, Christoph

مصطلحات موضوعية: Metabolomics, MetaboLights, Database, Repository, Data sharing, Standard, MSI, ISA-Tab, Curation, COSMOS

Relation: http://www.gigasciencejournal.com/content/2/1/8

الاتاحة: http://www.gigasciencejournal.com/content/2/1/8

المؤلفون: Sansone, Susanna-Assunta, Rocca-Serra, Philippe

مصطلحات موضوعية: Standard, Ontology, Data sharing, Curation, Data policy, ISA commons, ISA-Tab, BioSharing

Relation: http://www.gigasciencejournal.com/content/1/1/10

الاتاحة: http://www.gigasciencejournal.com/content/1/1/10

المؤلفون: Philippe Rocca-Serra, Reza M. Salek, Christoph Steinbeck, Julian L. Griffin, Eamonn Maguire, Mark Williams, Susanna-Assunta Sansone, Pablo Conesa, Kenneth Haug, Tejasvi Mahendraker

المصدر: Metabolomics

مصطلحات موضوعية: Engineering, Standardization, Short Communication, Endocrinology, Diabetes and Metabolism, Clinical Biochemistry, MEDLINE, 01 natural sciences, Biochemistry, Databases, 03 medical and health sciences, ISA-Tab, Resource (project management), Metabolomics, Human Metabolome Database, ISA commons, 030304 developmental biology, 0303 health sciences, business.industry, 010401 analytical chemistry, Omics, Data science, 0104 chemical sciences, Metabolomics data, Metadata, Workflow, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0e1521b0384561d2d02c8046adc4a016
https://doi.org/10.1007/s11306-012-0462-0

المؤلفون: Nir Shahaf, Urska Vrhovsek, Domenico Masuero, Panagiotis Arapitsas, Ron Wehrens, Roman Mylonas, Fulvio Mattivi, Silvia Carlin, Georg Weingart, Matthias Scholz, Pietro Franceschi

المصدر: Frontiers in Bioengineering and Biotechnology, Vol 2 (2014)
Frontiers in Bioengineering and Biotechnology

مصطلحات موضوعية: Settore CHIM/01 - CHIMICA ANALITICA, Histology, Computer science, Interface (computing), lcsh:Biotechnology, data analysis, Biomedical Engineering, Data analysis, Bioengineering, Context (language use), Documentation, Software, ISA-Tab, lcsh:TP248.13-248.65, Pipeline, Metabolomics, Technology Report, business.industry, GC-MS, LC-MS, metabolomics, pipeline, Bioengineering and Biotechnology, Data science, Pipeline (software), Metadata, Workflow, Mass spectrometry data format, business, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b25da8c433efb895bc0e3989508f3a61
http://hdl.handle.net/10449/24497

المؤلفون: Kenneth Haug, Christoph Steinbeck, Reza M. Salek

المصدر: GigaScience

مصطلحات موضوعية: Computer science, Health Informatics, Database, 03 medical and health sciences, ISA-Tab, 0302 clinical medicine, Metabolomics, MetaboLights, Dissemination, MSI, COSMOS, 030304 developmental biology, 0303 health sciences, Repository, Data science, Standard, Computer Science Applications, Metabolomics data, Curation, Data sharing, Open source, General purpose, 030220 oncology & carcinogenesis, Commentary, Cosmos (category theory)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a9e8e5d803d1a4b926afca8cfcba9811

المؤلفون: Susanna-Assunta Sansone, Philippe Rocca-Serra

المصدر: GigaScience
GigaScience, Vol 1, Iss 1, p 10 (2012)

مصطلحات موضوعية: Computer science, Ontology, Health Informatics, Ontology (information science), Key issues, lcsh:Computer applications to medicine. Medical informatics, Data science, Data policy, Standard, Computer Science Applications, Data sharing, Curation, ISA-Tab, Work (electrical), BioSharing, Commentary, Portfolio, lcsh:R858-859.7, Community standards, ISA commons

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cd29f410e969c8be801e60e099351c7e