المؤلفون: Sandsdalen, Greta Daae, Kumar, Animesh, Hjerde, Erik

Relation: Microorganisms; FRIDAID 2274280; https://hdl.handle.net/10037/34814

الاتاحة: https://hdl.handle.net/10037/34814
https://doi.org/10.3390/microorganisms12051028

المؤلفون: Neves, Aitana, Cuesta, Isabel, Hjerde, Erik, Klemetsen, Terje, Salgado, David, van Helden, Jacques, Rahman, Nadim, Fatima, Nazeefa, Karathanasis, Nestoras, Zmora, Pawel, Nyberg Åkerström, Wolmar, Nagaraja Grellscheid, Sushma, Waheed, Zahra, Blomberg, Niklas

المصدر: Frontiers in Public Health. 11

مصطلحات موضوعية: pathogen data sharing

وصف الملف: electronic

URL الوصول: https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-511108
https://doi.org/10.5281/zenodo.8138316
https://uu.diva-portal.org/smash/get/diva2:1795221/FULLTEXT01.pdf

المؤلفون: Bargheet, Ahmed, Klingenberg, Claus, Esaiassen, Eirin, Hjerde, Erik, Cavanagh, Jorunn Pauline, Bengtsson-Palme, Johan, 1985, Pettersen, Veronika Kuchařová

المصدر: Framtidens patogener och resistensgener EBioMedicine. 92

مصطلحات موضوعية: Extremely preterm infants, Gut microbiota, Gestational age, Probiotics, Resistome, Mobilome

وصف الملف: electronic

URL الوصول: https://research.chalmers.se/publication/535867
https://research.chalmers.se/publication/535867/file/535867_Fulltext.pdf

المؤلفون: Neves, Aitana, Hjerde, Erik, Ventouratou, Marianna

المساهمون: Hermjakob, Henning, Palagi, Patricia M., Rung, Johan, Kalokairinou, Louiza, Colussi, Ilaria, Terumalai, Dillenn

مصطلحات موضوعية: BY-COVID, BeYond Covid, Covid-19, Pathogens, Data Portals, FAIR data, FAIR sharing

Relation: https://zenodo.org/communities/bycovid; https://zenodo.org/communities/eu; https://doi.org/10.5281/zenodo.13946602; https://doi.org/10.5281/zenodo.13946603; oai:zenodo.org:13946603

الاتاحة: https://doi.org/10.5281/zenodo.13946603

المؤلفون: Kumar, Animesh, Robertsen, Espen Mikal, Willassen, Nils Peder, Fu, Juan, Hjerde, Erik

Relation: Genomics & Informatics; Kumar, Robertsen, Willassen, Fu, Hjerde. Comparative analysis of HiSeq3000 and BGISEQ-500 sequencing platform with shotgun metagenomic sequencing data. Genomics & Informatics. 2023;21(4); FRIDAID 2230085; https://hdl.handle.net/10037/32730

الاتاحة: https://hdl.handle.net/10037/32730
https://doi.org/10.5808/gi.23072

المؤلفون: Neves, Aitana, Dolanski-Aghamanoukjan, Lorenz, Maier, Wolfgang, Pergl, Robert, Akerström, Wolmar Nyberg, Hjerde, Erik, Cuesta, Isabel, Popleteeva, Marina, Oulas, Anastasia, Mohamed, Anliat, Tonazzolli, Arianna, Pilvar, Diana, Calhoun, Erin, Åberg, Espen, Erard, Frédéric, Rasche, Helena, Messak, Imane, van Helden, Jacques, Lara, Maria, Rahman, Nadim, Karathanasis, Nestoras, Willassen, Nils-Peder, Zmora, Pawel, Monzón, Sara, Hiltemann, Saskia, Singhroha, Sunny, Klemetsen, Terje, Denecker, Thomas, Waheed, Zahra

مصطلحات موضوعية: ELIXIR-CONVERGE, ELIXIR, SARS-COV-2, COVID-19, COVID-19 Data Platform, COVID-19 Data Portal, data brokering, RDMKit

Relation: https://zenodo.org/communities/elixir-converge; https://zenodo.org/communities/eu; https://doi.org/10.5281/zenodo.8116379; https://doi.org/10.5281/zenodo.8116380; oai:zenodo.org:8116380

الاتاحة: https://doi.org/10.5281/zenodo.8116380

المؤلفون: Maharajan, Amudha Deepalakshmi, Hjerde, Erik, Hansen, Hilde, Willassen, Nils P

Relation: Maharajan, A.D. (2023). AHL-mediated quorum sensing regulation: Role in controlling cytotoxicity, T6SSs and CRISPR-Cas systems in Aliivibrio wodanis . (Doctoral thesis). https://hdl.handle.net/10037/28075; Frontiers in Veterinary Science; Maharajan, Hjerde, Hansen, Willassen. Quorum Sensing Controls the CRISPR and Type VI Secretion Systems in Aliivibrio wodanis 06/09/139. Frontiers in Veterinary Science. 2022; FRIDAID 2002231; https://hdl.handle.net/10037/25110

الاتاحة: https://hdl.handle.net/10037/25110
https://doi.org/10.3389/fvets.2022.799414

المؤلفون: Lindstedt, Kenneth, Buczek, Dorota Julia, Pedersen, Torunn Annie, Hjerde, Erik, Raffelsberger, Niclas Peter, Suzuki, Yutaka, Brisse, Sylvain, Holt, Kathryn E., Samuelsen, Ørjan, Sundsfjord, Arnfinn

Relation: Gut microbes; Lindstedt K, Buczek DJ, Pedersen TP, Hjerde e, Raffelsberger NP, Suzuki Y, Brisse S, Holt KE, Samuelsen Ø, Sundsfjord A. Detection of Klebsiella pneumoniae human gut carriage: a comparison of culture, qPCR, and whole metagenomic sequencing methods. Gut microbes. 2022;14(1); FRIDAID 2055896; https://hdl.handle.net/10037/27418

الاتاحة: https://hdl.handle.net/10037/27418
https://doi.org/10.1080/19490976.2022.2118500

المؤلفون: Lunde, Tracy Munthali, Hjerde, Erik, Al-Haroni, Mohammed

مصطلحات موضوعية: VDP::Medical disciplines: 700::Clinical dentistry disciplines: 830, VDP::Medisinske Fag: 700::Klinisk odontologiske fag: 830

Relation: Lunde, T.M. (2022). Antibiotic Resistance in Oral Streptococci: The prevalence, diversity, stability, and fitness cost of Tn916 -Tn1545 family in oral streptococcal isolates. (Doctoral thesis). https://hdl.handle.net/10037/24192 .; Journal of Oral Microbiology; Lunde T, Hjerde e, Al-Haroni M. Prevalence, diversity and transferability of the Tn916-Tn1545 family ICE in oral streptococci. Journal of Oral Microbiology. 2021;13; FRIDAID 1898482; https://hdl.handle.net/10037/21833

الاتاحة: https://hdl.handle.net/10037/21833
https://doi.org/10.1080/20002297.2021.1896874

المؤلفون: Sanabria-Moreno, Adriana Maria, James Peter, Jessin Janice, Hjerde, Erik, Simonsen, Gunnar Skov, Hanssen, Anne Merethe

مصطلحات موضوعية: VDP::Medical disciplines: 700::Basic medical, dental and veterinary science disciplines: 710, VDP::Medisinske Fag: 700::Basale medisinske, odontologiske og veterinærmedisinske fag: 710

Relation: Scientific Reports; Sanabria-Moreno, James Peter, Hjerde, Simonsen, Hanssen. Shotgun-metagenomics based prediction of antibiotic resistance and virulence determinants in Staphylococcus aureus from periprosthetic tissue on blood culture bottles. Scientific Reports. 2021; FRIDAID 1950975; https://hdl.handle.net/10037/23106

الاتاحة: https://hdl.handle.net/10037/23106
https://doi.org/10.1038/s41598-021-00383-7

المؤلفون: Fatima, Nazeefa, Bianchini, Federico, Dolan, David, Hjerde, Erik, Åberg, Espen, Ostrop, Jenny, Gabrielsen, Ane Møller, Fossum-Raunehaug, Solveig, Vollan, Erik Axel, Bösl, Korbinian

مصطلحات موضوعية: Data Management, Data Management Planning, Research Data Management

Relation: https://github.com/ELIXIR-Norway-Training/DMP-writing-workshop/tree/2024-06-05; https://zenodo.org/communities/dln; https://zenodo.org/communities/elixir-no; https://doi.org/10.5281/zenodo.3693710; https://doi.org/10.5281/zenodo.12759448; oai:zenodo.org:12759448

الاتاحة: https://doi.org/10.5281/zenodo.12759448

المؤلفون: Goll, Rasmus, Johnsen, Peter Holger, Hjerde, Erik, Diab, Joseph, Valle, Per Christian, Hilpüsch, Frank, Cavanagh, Jorunn Pauline

مصطلحات موضوعية: VDP::Medical disciplines: 700, VDP::Medisinske Fag: 700

Relation: Gut microbes; Goll, Johnsen, Hjerde, Diab, Valle, Hilpüsch, Cavanagh. Effects of fecal microbiota transplantation in subjects with irritable bowel syndrome are mirrored by changes in gut microbiome. Gut microbes. 2020;12:e1794263(1):1-15; FRIDAID 1838853; https://hdl.handle.net/10037/21040

الاتاحة: https://hdl.handle.net/10037/21040
https://doi.org/10.1080/19490976.2020.1794263

المؤلفون: Sanabria-Moreno, Adriana Maria, Hjerde, Erik, Johannessen, Mona, Sollid, Johanna U Ericson, Simonsen, Gunnar Skov, Hanssen, Anne Merethe

مصطلحات موضوعية: VDP::Medical disciplines: 700::Basic medical, dental and veterinary science disciplines: 710::Medical microbiology: 715, VDP::Medisinske Fag: 700::Basale medisinske, odontologiske og veterinærmedisinske fag: 710::Medisinsk mikrobiologi: 715

Relation: Frontiers in Microbiology; Sanabria-Moreno, Hjerde, Johannessen, Sollid, Simonsen, Hanssen. Shotgun-Metagenomics on Positive Blood Culture Bottles Inoculated With Prosthetic Joint Tissue: A Proof of Concept Study. Frontiers in Microbiology. 2020; FRIDAID 1865318; https://hdl.handle.net/10037/20360

الاتاحة: https://hdl.handle.net/10037/20360
https://doi.org/10.3389/fmicb.2020.01687

المؤلفون: Hjerde, Erik

المصدر: Septentrio Conference Series; No 1 (2020): Workshop on FAIR Research Data Curation ; 2387-3086 ; 10.7557/scs.2020.1

وصف الملف: application/pdf

Relation: https://septentrio.uit.no/index.php/SCS/article/view/5328/5075; https://septentrio.uit.no/index.php/SCS/article/view/5328

الاتاحة: https://septentrio.uit.no/index.php/SCS/article/view/5328
https://doi.org/10.7557/5.5328

المؤلفون: Jonassen, Inge, Bösl, Korbinian, Goble, Carole, Alper, Pinar, Droesbeke, Bert, D'Anna, Flora, Faria, Daniel, Andrabi, Munazah, Coppens, Frederik, Cook, Martin, Jareborg, Niclas, Wittig, Ulrike, Portell Silva, Laura, Jetten, Mijke, Hooft, Rob, Bianchini, Federico, van Gelder, Celia, Fuchs, Siiri, Ahokas, Minna, Kallberg, Yvonne, Collin, Olivier, Berka, Karel, Williams, Alan R, Englund, Markus, Carraro, Marco, Fatima, Nazeefa, Åkerström, Wolmar Nyberg, Gu, Wei, Hjerde, Erik, Åberg, Epsen, Willassen, Nils-Peder, Lieby, Paulette, Adam-Blondon, Anne-Françoise, Adler, Pritt, Vergoulis, Thanasis

مصطلحات موضوعية: ELIXIR-CONVERGE, CONVERGE, ELIXIR, RDMKit, Toolkit, ELIXIR Data Management Network, Data Stewardship Wizard

Relation: https://zenodo.org/communities/elixir-converge; https://zenodo.org/communities/eu; https://doi.org/10.5281/zenodo.5139896; https://doi.org/10.5281/zenodo.5139897; oai:zenodo.org:5139897

الاتاحة: https://doi.org/10.5281/zenodo.5139897

المؤلفون: Flygel, Trym Thune, Sovershaeva, Evgeniya, Classen-Weitz, Shantelle, Hjerde, Erik, Mwaikono, Kilaza S., Odland, Jon Øyvind, Ferrand, Rashida A., McHugh, Grace, Gutteberg, Tore Jarl, Nicol, Mark P., Cavanagh, Jorunn Pauline, Flægstad, Trond

مصطلحات موضوعية: VDP::Medical disciplines: 700::Clinical medical disciplines: 750::Communicable diseases: 776, VDP::Medisinske Fag: 700::Klinisk medisinske fag: 750::Infeksjonsmedisin: 776

Relation: Sovershaeva, E. (2019). HIV-infection in children and adolescents in Zimbabwe: viral suppression, airway abnormalities and gut microbiota. (Doctoral thesis). https://hdl.handle.net/10037/16909 .; Flygel, T.T. (2024). HIV Infected African Children: Gut microbiota in relation to chronic lung disease and long-term antibiotic treatment. (Doctoral thesis). https://hdl.handle.net/10037/33175 .; Journal of Infectious Diseases; FRIDAID 1736438; https://hdl.handle.net/10037/16913

الاتاحة: https://hdl.handle.net/10037/16913
https://doi.org/10.1093/infdis/jiz473

المؤلفون: Pain, Maria Charlene Ronessen, Hjerde, Erik, Klingenberg, Claus, Cavanagh, Jorunn Pauline

مصطلحات موضوعية: VDP::Medical disciplines: 700::Basic medical, dental and veterinary science disciplines: 710::Medical microbiology: 715, VDP::Medisinske Fag: 700::Basale medisinske, odontologiske og veterinærmedisinske fag: 710::Medisinsk mikrobiologi: 715

Relation: Pain, M.C.R. (2020). Exploring the pangenome of Staphylococcus haemolyticus. Colonisation, hospital adaption, pathogenicity and novel species identification. (Doctoral thesis). https://hdl.handle.net/10037/17894.; Frontiers in Microbiology; Pain MC, Hjerde e, Klingenberg C, Cavanagh JP. Comparative Genomic Analysis of Staphylococcus haemolyticus Reveals Key to Hospital Adaptation and Pathogenicity. Frontiers in Microbiology. 2019;10; FRIDAID 1739604; https://hdl.handle.net/10037/17501

الاتاحة: https://hdl.handle.net/10037/17501
https://doi.org/10.3389/fmicb.2019.02096

المؤلفون: Johansson Söderberg, Jenny, Grgic, Miriam, Hjerde, Erik, Haugen, Peik

مصطلحات موضوعية: VDP::Medical disciplines: 700::Basic medical, dental and veterinary science disciplines: 710, VDP::Medisinske Fag: 700::Basale medisinske, odontologiske og veterinærmedisinske fag: 710

Relation: Microbial Cell Factories; Norges forskningsråd: 234541; info:eu-repo/grantAgreement/RCN/BIOTEK2021/234541/Norway/PsyXpress: Development of a new bacterial host for efficient expression of cold-adapted enzymes//; Johansson Söderberg J, Grgic M, Hjerde e, Haugen P. Aliivibrio wodanis as a production host: development of genetic tools for expression of cold-active enzymes. Microbial Cell Factories. 2019;18(1); FRIDAID 1748522; https://hdl.handle.net/10037/17773

الاتاحة: https://hdl.handle.net/10037/17773
https://doi.org/10.1186/s12934-019-1247-1

المؤلفون: Le Doujet, Typhaine, De Santi, Concetta, Klemetsen, Terje, Hjerde, Erik, Willassen, Nils Peder, Haugen, Peik

مصطلحات موضوعية: VDP::Mathematics and natural science: 400::Basic biosciences: 470::General microbiology: 472, VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470::Generell mikrobiologi: 472, Atlantic cod, Skrei, Piscivorous, Microbiota, Microbiome, Allochthonous, Metagenome-assembled genomes (MAGs)

Relation: Microbiome; Le Doujet, T., De Santi, C., Klemetsen, T., Hjerde, E., Willassen, N.P. & Haugen, P. (2019). Closely-related Photobacterium strains comprise the majority of bacteria in the gut of migrating Atlantic cod ( Gadus morhua ). Microbiome, 7 (1), 64. https://doi.org/10.1186/s40168-019-0681-y; FRIDAID 1693333; https://hdl.handle.net/10037/16395

الاتاحة: https://hdl.handle.net/10037/16395
https://doi.org/10.1186/s40168-019-0681-y

المؤلفون: Khider, Miriam, Hansen, Hilde, Hjerde, Erik, Johansen, Jostein A, Willassen, Nils Peder

مصطلحات موضوعية: Quorum sensing, Acyl homoserine lactone, Aliivibrio salmonicida, Biofilm, Exopolysccharides, VDP::Mathematics and natural science: 400::Chemistry: 440, VDP::Matematikk og Naturvitenskap: 400::Kjemi: 440

Relation: Khider, M. (2019). Exploring Quorum Sensing Dynamics and Biofilm Formation in the Fish Pathogen Aliivibrio salmonicida . (Doctoral thesis). https://hdl.handle.net/10037/16612 .; PeerJ; Khider, M., Hansen, H., Hjerde, E, Johansen, J.A. & Willassen, N.P. (2018). Exploring the transcriptome of luxI- and ΔainS mutants and the impact of N-3-oxo-hexanoyl-L- and N-3-hydroxy- decanoyl-L-homoserine lactones on biofilm formation in Aliivibrio salmonicida . PeerJ , 7:e6845. https://doi.org/10.7717/peerj.6845; FRIDAID 1694684; peerj.com/articles/6845/; https://hdl.handle.net/10037/15310

الاتاحة: https://hdl.handle.net/10037/15310