المؤلفون: Makiko Kosugi, Shuji Ohtani, Kojiro Hara, Atsushi Toyoda, Hiroyo Nishide, Shin-Ichiro Ozawa, Yuichiro Takahashi, Yasuhiro Kashino, Sakae Kudoh, Hiroyuki Koike, Jun Minagawa

المصدر: Frontiers in Plant Science, Vol 15 (2024)

مصطلحات موضوعية: photosynthesis, far-red (FR) light, Antarctica, light harvesting complex, draft genome assembly and annotation, RNA-seq, Plant culture, SB1-1110

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpls.2024.1409116/full; https://doaj.org/toc/1664-462X

URL الوصول: https://doaj.org/article/3ff66e221bde4f35a877794dbbfa2657

المؤلفون: Rutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven T. Bolleman, Evan Bolton, Raoul J. P. Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, Kevin B. Cohen, Eric W. Deutsch, Jesualdo T. Fernández-Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yuki Naito, Takeru Nakazato, Jeremy Nguyen-Xuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosinach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron Taylor, Mark Thompson, Ikuo Uchiyama, Bruno Vieira, Chih-Hsuan Wei, Mark Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, Toshihisa Takagi

المصدر: F1000Research, Vol 9 (2020)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://f1000research.com/articles/9-136/v1; https://doaj.org/toc/2046-1402

URL الوصول: https://doaj.org/article/6d102248ecd24affbea7a5223da6573a

المؤلفون: Tomoyuki Shikata, Fumio Takahashi, Hiroyo Nishide, Shuji Shigenobu, Yasuhiro Kamei, Setsuko Sakamoto, Kouki Yuasa, Yoshitaka Nishiyama, Yasuhiro Yamasaki, Ikuo Uchiyama

المصدر: Frontiers in Microbiology, Vol 10 (2019)

مصطلحات موضوعية: aureochrome, cryptochrome, harmful algae, NADPH-oxidase, phytochrome, pigment biosynthesis, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fmicb.2019.01764/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/9553459f01414c26bd98d9e17808a139

المؤلفون: Atsushi Hoshino, Vasanthan Jayakumar, Eiji Nitasaka, Atsushi Toyoda, Hideki Noguchi, Takehiko Itoh, Tadasu Shin-I, Yohei Minakuchi, Yuki Koda, Atsushi J. Nagano, Masaki Yasugi, Mie N. Honjo, Hiroshi Kudoh, Motoaki Seki, Asako Kamiya, Toshiyuki Shiraki, Piero Carninci, Erika Asamizu, Hiroyo Nishide, Sachiko Tanaka, Kyeung-Il Park, Yasumasa Morita, Kohei Yokoyama, Ikuo Uchiyama, Yoshikazu Tanaka, Satoshi Tabata, Kazuo Shinozaki, Yoshihide Hayashizaki, Yuji Kohara, Yutaka Suzuki, Sumio Sugano, Asao Fujiyama, Shigeru Iida, Yasubumi Sakakibara

المصدر: Nature Communications, Vol 7, Iss 1, Pp 1-10 (2016)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/1ea90c15312b469099849ef61890215f

المؤلفون: Hirokazu Chiba, Hiroyo Nishide, Ikuo Uchiyama

المصدر: PLoS ONE, Vol 10, Iss 4, p e0122802 (2015)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC4395280?pdf=render; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/fdc2d4b503f54e69b6e09c710c21e7f8

المؤلفون: Hiroyo Nishide, Ikuo Uchiyama, Iwane Suzuki, Masahiko Ikeuchi, Minoru Kanehisa, Norio Murata, Tatsuo Omata, Tomoki Miwa

المصدر: Genome Informatics. 2000, 11:235

المؤلفون: Makiko Kosugi, Shuji Ohtani, Kojiro Hara, Atsushi Toyoda, Hiroyo Nishide, Shin-Ichiro Ozawa, Yuichiro Takahashi, Yasuhiro Kashino, Sakae Kudoh, Hiroyuki Koike, Jun Minagawa

مصطلحات موضوعية: Botany, Plant Biology, Plant Systematics and Taxonomy, Plant Cell and Molecular Biology, Plant Developmental and Reproductive Biology, Plant Pathology, Plant Physiology, Plant Biology not elsewhere classified, photosynthesis, far-red (FR) light, Antarctica, light harvesting complex, draft genome assembly and annotation, RNA-seq, green algae, phylogenetic analysis

Relation: https://figshare.com/articles/dataset/DataSheet_1_Characterization_of_the_far-red_light_absorbing_light-harvesting_chlorophyll_a_b_binding_complex_a_derivative_of_the_distinctive_Lhca_gene_family_in_green_algae_docx/26000362

الاتاحة: https://doi.org/10.3389/fpls.2024.1409116.s001
https://figshare.com/articles/dataset/DataSheet_1_Characterization_of_the_far-red_light_absorbing_light-harvesting_chlorophyll_a_b_binding_complex_a_derivative_of_the_distinctive_Lhca_gene_family_in_green_algae_docx/26000362

المؤلفون: Tomoyuki Shikata, Fumio Takahashi, Hiroyo Nishide, Shuji Shigenobu, Yasuhiro Kamei, Setsuko Sakamoto, Kouki Yuasa, Yoshitaka Nishiyama, Yasuhiro Yamasaki, Ikuo Uchiyama

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, aureochrome, cryptochrome, harmful algae, NADPH-oxidase, phytochrome, pigment biosynthesis, transcriptome, transporter

Relation: https://figshare.com/articles/presentation/Presentation_1_RNA-Seq_Analysis_Reveals_Genes_Related_to_Photoreception_Nutrient_Uptake_and_Toxicity_in_a_Noxious_Red-Tide_Raphidophyte_Chattonella_antiqua_pptx/9199703

الاتاحة: https://doi.org/10.3389/fmicb.2019.01764.s005
https://figshare.com/articles/presentation/Presentation_1_RNA-Seq_Analysis_Reveals_Genes_Related_to_Photoreception_Nutrient_Uptake_and_Toxicity_in_a_Noxious_Red-Tide_Raphidophyte_Chattonella_antiqua_pptx/9199703

المؤلفون: Hiroyo Nishide, Jian Ren Shen, Natsuko Inoue-Kashino, Minoru Kumazawa, Yasuhiro Kashino, Takeshi Nakano, Ikuo Uchiyama, Kentaro Ifuku, Ryo Nagao

المصدر: Physiologia Plantarum. 174

مصطلحات موضوعية: Diatoms, Phylogenetic tree, biology, Endosymbiosis, Physiology, Chlorophyll A, Lineage (evolution), Light-Harvesting Protein Complexes, Cell Biology, Plant Science, General Medicine, Xanthophylls, Haptophyta, biology.organism_classification, Photosystem I, chemistry.chemical_compound, Diatom, chemistry, Algae, Evolutionary biology, Genetics, Fucoxanthin, Chlorophyll Binding Proteins, Phylogeny

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::13eea71f1248655d8ec4b7ca34ff1bf4
https://doi.org/10.1111/ppl.13598

المؤلفون: Hiroyo Nishide, Kentaro Ifuku, Minoru Kumazawa, Ikuo Uchiyama, Takeshi Nakano, Natsuko Inoue-Kashino, Ryo Nagao, Yasuhiro Kashino, Jian Ren Shen

مصطلحات موضوعية: Subfamily, Diatom, biology, Algae, Endosymbiosis, Evolutionary biology, Lineage (evolution), Red algae, Haptophyta, biology.organism_classification, Photosystem I

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::9ef10f622d263bbe577af7c410469295
https://doi.org/10.1101/2021.09.06.459020

المؤلفون: Hiroyo Nishide, Ken-ichi T. Suzuki, Takashi Yamamoto, Miyuki Suzuki, Midori Iida, Yuto Sakane, Ikuo Uchiyama, Satoshi Fujii

المصدر: Genes to cells : devoted to molecularcellular mechanismsREFERENCES. 25(7)

مصطلحات موضوعية: Male, Genotype, Xenopus, Computational biology, Biology, Frameshift mutation, Workflow, 03 medical and health sciences, Germline mutation, INDEL Mutation, Genetics, CRISPR, Animals, Frameshift Mutation, Gene, Genotyping, Genetic Association Studies, 030304 developmental biology, Gene Library, Gene Editing, 0303 health sciences, High-Throughput Nucleotide Sequencing, Cell Biology, Amplicon, Phenotype, Mutation (genetic algorithm), Female, CRISPR-Cas Systems, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::100d03a6ecc4ebffb6d410de4cac0ec4
https://pubmed.ncbi.nlm.nih.gov/32323394

المؤلفون: Takatomo Fujisawa, Shujiro Okuda, Rutger A. Vos, Yuki Naito, Benedict Paten, Toshihisa Takagi, Atsushi Fukushima, Issaku Yamada, Kouji Kozaki, Atsuko Yamaguchi, Shin Kawano, Jeremy Nguyen-Xuan, Toshiaki Katayama, Tudor Groza, Takeru Nakazato, Tazro Ohta, Toshiaki Tokimatsu, Akira R. Kinjo, Tsuyosi Tabata, Bruno Vieira, Kotone Itaya, Eric W. Deutsch, Evan E Bolton, Kenjiro Kosaki, Yasunori Yamamoto, Sadahiro Kumagai, Soichi Ogishima, Pjotr Prins, Mark Wilkinson, Núria Queralt-Rosinach, Colin Hercus, Philip Prathipati, Alexander Garcia, Hidemasa Bono, Shuichi Kawashima, Jerven Bolleman, Yuki Moriya, Chih-Hsuan Wei, Ryota Yamanaka, Masaaki Matsubara, Akiyasu C. Yoshizawa, Jesualdo Tomás Fernández-Breis, Naoki Nishida, Thomas Lütteke, Hiroyo Nishide, Jin-Dong Kim, Kees Burger, Kevin Bretonnel Cohen, Nobuyuki P. Aoki, Kozo Nishida, Joe Miyamoto, Michel Dumontier, Robert Hoehndorf, Attayeb Mohsen, Peter Amstutz, Nick Juty, Raoul J. P. Bonnal, Kieron Taylor, Hiroyuki Mishima, Naohisa Goto, Masaaki Kotera, Tatsuya Kushida, Hiroshi Mori, Ikuo Uchiyama, Takeshi Kawashima, Kazutoshi Yoshitake, Jean-Luc Perret, Kazuharu Arakawa, Jee-Hyub Kim, Daisuke Shinmachi, Shinya Suzuki, Mark Thompson, Terue Takatsuki, Erick Antezana, Hongyan Wu, Gang Fu, Hirokazu Chiba

المساهمون: Institute of Data Science, RS: FSE Studio Europa Maastricht, RS: FSE DACS IDS

المصدر: F1000Research, 9. F1000 Research Ltd.
F1000Research

مصطلحات موضوعية: 0301 basic medicine, Computer science, Bioinformatics, Clinical Sciences, Oncology and Carcinogenesis, Ontology (information science), computer.software_genre, Semantics, General Biochemistry, Genetics and Molecular Biology, Biological Science Disciplines, Workflows, 03 medical and health sciences, Databases, 0302 clinical medicine, Web Services, Genetics, Data Mining, General Pharmacology, Toxicology and Pharmaceutics, Semantic Web, Visualization, Biological data, Metadata, General Immunology and Microbiology, Ontology, Computational Biology, Reproducibility of Results, Articles, General Medicine, Linked data, Opinion Article, Data science, 030104 developmental biology, Workflow, Networking and Information Technology R&D (NITRD), BioHackathon, Biochemistry and Cell Biology, Web service, computer, 030217 neurology & neurosurgery, Linked Open Data

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::69bc30c9d74c1248bb68af22746ba6f9
https://cris.maastrichtuniversity.nl/en/publications/f3a06590-62bd-47fc-bf50-b89db8f73b70

المؤلفون: Minoru Kumazawa, Hiroyo Nishide, Ryo Nagao, Natsuko Inoue-Kashino, Jian-Ren Shen, Takeshi Nakano, Ikuo Uchiyama, Yasuhiro Kashino, Kentaro Ifuku

المصدر: Physiologia Plantarum; Jan/Feb2022, Vol. 174 Issue 1, p1-19, 19p

مصطلحات موضوعية: CARBON cycle, MOLECULAR phylogeny, RED algae, NAVICULA, PHOTOSYSTEMS, DIATOMS, CARRIER proteins, PRYMNESIOPHYCEAE

المؤلفون: Masaki Kato, Hiroyo Nishide, Hirokazu Chiba, Ikuo Uchiyama, Motohiro Mihara

المصدر: Nucleic Acids Research

مصطلحات موضوعية: Genomics, Biology, computer.software_genre, Genome, 03 medical and health sciences, User-Computer Interface, 0302 clinical medicine, Genome, Archaeal, Sequence Homology, Nucleic Acid, Databases, Genetic, Genetics, SPARQL, Cluster Analysis, Database Issue, RDF, 030304 developmental biology, Comparative genomics, 0303 health sciences, Phylogenetic tree, Database, computer.file_format, Taxon, Table (database), Genome, Fungal, computer, Genome, Protozoan, 030217 neurology & neurosurgery, Genome, Bacterial, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::26d0728da6581aade493d68b1b948b50
https://pubmed.ncbi.nlm.nih.gov/30462302

المؤلفون: Tomoyuki Shikata, Fumio Takahashi, Hiroyo Nishide, Shuji Shigenobu, Yasuhiro Kamei, Setsuko Sakamoto, Kouki Yuasa, Yoshitaka Nishiyama, Yasuhiro Yamasaki, Ikuo Uchiyama

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, aureochrome, cryptochrome, harmful algae, NADPH-oxidase, phytochrome, pigment biosynthesis, transcriptome, transporter

Relation: https://figshare.com/articles/dataset/Table_1_RNA-Seq_Analysis_Reveals_Genes_Related_to_Photoreception_Nutrient_Uptake_and_Toxicity_in_a_Noxious_Red-Tide_Raphidophyte_Chattonella_antiqua_DOCX/9199706

الاتاحة: https://doi.org/10.3389/fmicb.2019.01764.s006
https://figshare.com/articles/dataset/Table_1_RNA-Seq_Analysis_Reveals_Genes_Related_to_Photoreception_Nutrient_Uptake_and_Toxicity_in_a_Noxious_Red-Tide_Raphidophyte_Chattonella_antiqua_DOCX/9199706

المؤلفون: Tomoyuki Shikata, Fumio Takahashi, Hiroyo Nishide, Shuji Shigenobu, Yasuhiro Kamei, Setsuko Sakamoto, Kouki Yuasa, Yoshitaka Nishiyama, Yasuhiro Yamasaki, Ikuo Uchiyama

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, aureochrome, cryptochrome, harmful algae, NADPH-oxidase, phytochrome, pigment biosynthesis, transcriptome, transporter

Relation: https://figshare.com/articles/dataset/Data_Sheet_2_RNA-Seq_Analysis_Reveals_Genes_Related_to_Photoreception_Nutrient_Uptake_and_Toxicity_in_a_Noxious_Red-Tide_Raphidophyte_Chattonella_antiqua_xlsx/9199694

الاتاحة: https://doi.org/10.3389/fmicb.2019.01764.s002
https://figshare.com/articles/dataset/Data_Sheet_2_RNA-Seq_Analysis_Reveals_Genes_Related_to_Photoreception_Nutrient_Uptake_and_Toxicity_in_a_Noxious_Red-Tide_Raphidophyte_Chattonella_antiqua_xlsx/9199694

المؤلفون: Tomoyuki Shikata, Fumio Takahashi, Hiroyo Nishide, Shuji Shigenobu, Yasuhiro Kamei, Setsuko Sakamoto, Kouki Yuasa, Yoshitaka Nishiyama, Yasuhiro Yamasaki, Ikuo Uchiyama

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, aureochrome, cryptochrome, harmful algae, NADPH-oxidase, phytochrome, pigment biosynthesis, transcriptome, transporter

Relation: https://figshare.com/articles/dataset/Data_Sheet_-1_RNA-Seq_Analysis_Reveals_Genes_Related_to_Photoreception_Nutrient_Uptake_and_Toxicity_in_a_Noxious_Red-Tide_Raphidophyte_Chattonella_antiqua_xlsx/9199691

الاتاحة: https://doi.org/10.3389/fmicb.2019.01764.s001
https://figshare.com/articles/dataset/Data_Sheet_-1_RNA-Seq_Analysis_Reveals_Genes_Related_to_Photoreception_Nutrient_Uptake_and_Toxicity_in_a_Noxious_Red-Tide_Raphidophyte_Chattonella_antiqua_xlsx/9199691

المؤلفون: Goh Onistuka, Hiroyo Nishide, Mineo Yamaguchi, Setsuko Sakamoto, Tomoyuki Shikata, Shigeru Matsunaga

المصدر: Limnology and Oceanography. 60:1251-1264

مصطلحات موضوعية: Light intensity, Karenia mikimotoi, biology, Chattonella, Botany, Dinoflagellate, Aquatic Science, Flagellate, Heterocapsa circularisquama, Raphidophyte, Oceanography, biology.organism_classification, Heterosigma akashiwo

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::c8d728b2790b83bc2c23746f8a9f8329
https://doi.org/10.1002/lno.10095

المؤلفون: Hiroyo Nishide, Ikuo Uchiyama, Motohiro Mihara, Hirokazu Chiba

المصدر: Nucleic Acids Research

مصطلحات موضوعية: Multiple sequence alignment, Database, Genomics, Sequence alignment, Biology, computer.software_genre, Genome, Protein Structure, Tertiary, Set (abstract data type), Genome, Microbial, ComputingMethodologies_PATTERNRECOGNITION, Databases, Genetic, Genetics, Database Issue, Animals, Humans, Table (database), Cluster analysis, Sequence Alignment, computer, Reference genome

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::563ca20bb1ce0ce3f09a52a5989ad57d
https://doi.org/10.1093/nar/gku1152

المؤلفون: Akira R. Kinjo, Tatsuya Kushida, Hiroshi Mori, Shuichi Kawashima, Mark Wilkinson, Takeshi Kawashima, Mark Thompson, Leyla Garcia, Shin Kawano, Kazuharu Arakawa, Shujiro Okuda, Jerven Bolleman, Shinobu Okamoto, Toshihisa Takagi, Yusuke Komiyama, Emi Hattori, Hiroyo Nishide, Jin-Dong Kim, Toshiaki Tokimatsu, Kiyoko F. Aoki-Kinoshita, Tazro Ohta, Francesco Strozzi, Toshiaki Katayama, Daisuke Shinmachi, Karin Verspoor, Masaaki Kotera, Matthew Paul Campbell, Shinya Suzuki, Yue Wang, Katsuhiko Murakami, Simon Jupp, Sarala M. Wimalaratne, Issaku Yamada, Erick Antezana, Atsuko Yamaguchi, Kotone Itaya, Masaki Banno, Hirokazu Chiba, Alex Kalderimis, Joachim Baran, Andrea Splendiani, Masayuki Yarimizu, Soichi Ogishima, Yuki Moriya, Hongyan Wu, Robert Hoehndorf, Maori Ito, Toyofumi Fujiwara, Masaaki Matsubara, Gos Micklem, Peter J. A. Cock, Fumihiro Kato, Jesualdo Tomás Fernández-Breis, Yasunori Yamamoto, Takatomo Fujisawa, Hidemasa Bono, Takeru Nakazato, Yasset Perez-Riverol, Yosuke Nishimura, Junichi Takehara, Hiromasa Ono, Sayaka Mizutani, Nozomi Yamamoto, James Malone, Michel Dumontier, Simon Kocbek, Hideya Kawaji, Robert Buels, Pascale Gaudet, Shoko Kawamoto, Kevin Bretonnel Cohen, Daniel G. Jamieson, Ikuo Uchiyama, Nick Juty, Raoul J. P. Bonnal, Satoshi Mizuno

المصدر: F1000Research. 8:1677

مصطلحات موضوعية: 0301 basic medicine, 030102 biochemistry & molecular biology, General Immunology and Microbiology, Computer science, Service discovery, General Medicine, computer.file_format, Semantic interoperability, computer.software_genre, General Biochemistry, Genetics and Molecular Biology, Data sharing, World Wide Web, 03 medical and health sciences, 030104 developmental biology, SPARQL, General Pharmacology, Toxicology and Pharmaceutics, RDF, computer, Semantic Web, Data integration, RDF query language, computer.programming_language

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::e4bd1aa743151a92ccac41879dc38646
https://doi.org/10.12688/f1000research.18238.1