المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/journal_contribution/This_file_contains_S1_S9_Figs_/25280907

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.s001
https://figshare.com/articles/journal_contribution/This_file_contains_S1_S9_Figs_/25280907

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

المصدر: PLoS ONE, Vol 19, Iss 2 (2024)

مصطلحات موضوعية: Medicine, Science

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10890740/?tool=EBI; https://doaj.org/toc/1932-6203; https://doaj.org/article/8bb7f499477a403895462b3bb1c85a9a

الاتاحة: https://doaj.org/article/8bb7f499477a403895462b3bb1c85a9a

المؤلفون: Dorothée Ledoux, Isabelle Veissier, Bruno Meunier, Valérie Gelin, Christophe Richard, Hélène Kiefer, Hélène Jammes, Gilles Foucras, Alice de Boyer des Roches

المصدر: Scientific Reports, Vol 13, Iss 1, Pp 1-18 (2023)

مصطلحات موضوعية: Medicine, Science

Relation: https://doi.org/10.1038/s41598-023-27884-x; https://doaj.org/toc/2045-2322; https://doaj.org/article/603af57c8bb340e8bf687599a8db3cf1

الاتاحة: https://doi.org/10.1038/s41598-023-27884-x
https://doaj.org/article/603af57c8bb340e8bf687599a8db3cf1

المؤلفون: Miriama Štiavnická, Aurélie Chaulot-Talmon, Jean‑Philippe Perrier, Petr Hošek, David A. Kenny, Patrick Lonergan, Hélène Kiefer, Sean Fair

مصطلحات موضوعية: Biological sciences, male fertility, dairy industry, DNA methylation, epigenetics, RRBS, spermatozoa

Relation: https://figshare.com/articles/journal_contribution/Sperm_DNA_methylation_patterns_at_discrete_CpGs_and_genes_involved_in_embryonic_development_are_related_to_bull_fertility/22769366

الاتاحة: https://doi.org/10.34961/researchrepository-ul.22769366.v1
https://figshare.com/articles/journal_contribution/Sperm_DNA_methylation_patterns_at_discrete_CpGs_and_genes_involved_in_embryonic_development_are_related_to_bull_fertility/22769366

المؤلفون: Eveline M. Ibeagha-Awemu, Hélène Kiefer, Stephanie McKay, George E. Liu

المصدر: Frontiers in Genetics, Vol 13 (2022)

مصطلحات موضوعية: livestock, DNA/RNA methylation, histone tail modifications, production, reproduction, nutrition, Genetics, QH426-470

Relation: https://www.frontiersin.org/articles/10.3389/fgene.2022.942747/full; https://doaj.org/toc/1664-8021; https://doaj.org/article/41fc2ff797d74bb6b08fc21287368e84

الاتاحة: https://doi.org/10.3389/fgene.2022.942747
https://doaj.org/article/41fc2ff797d74bb6b08fc21287368e84

المؤلفون: Eli Sellem, Sylvain Marthey, Andrea Rau, Luc Jouneau, Aurelie Bonnet, Chrystelle Le Danvic, Benoît Guyonnet, Hélène Kiefer, Hélène Jammes, Laurent Schibler

المصدر: Epigenetics & Chromatin, Vol 14, Iss 1, Pp 1-18 (2021)

مصطلحات موضوعية: Sperm epigenetics, SncRNAs, Bovine, MiRNA, PiRNA, TRFs, Genetics, QH426-470

Relation: https://doi.org/10.1186/s13072-021-00397-5; https://doaj.org/toc/1756-8935; https://doaj.org/article/be1b23cb97584a5ea5a6c2d35bf680e0

الاتاحة: https://doi.org/10.1186/s13072-021-00397-5
https://doaj.org/article/be1b23cb97584a5ea5a6c2d35bf680e0

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/dataset/This_table_lists_the_chromosomal_locations_of_the_SNPs_that_have_been_pre-selected_by_Random_Forest_as_well_as_the_associated_genotypes_for_each_individual_/25280916

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.s004
https://figshare.com/articles/dataset/This_table_lists_the_chromosomal_locations_of_the_SNPs_that_have_been_pre-selected_by_Random_Forest_as_well_as_the_associated_genotypes_for_each_individual_/25280916

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/dataset/This_table_lists_the_standardized_methylation_values_for_each_bull_in_the_cohort_for_the_CpGs_that_were_pre-selected_by_Random_Forest_/25280913

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.s003
https://figshare.com/articles/dataset/This_table_lists_the_standardized_methylation_values_for_each_bull_in_the_cohort_for_the_CpGs_that_were_pre-selected_by_Random_Forest_/25280913

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/dataset/This_table_lists_the_standardized_and_batch_corrected_sncRNA_values_for_each_bull_in_the_cohort_for_the_sncRNAs_that_were_pre-selected_by_Random_Forest_/25280919

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.s005
https://figshare.com/articles/dataset/This_table_lists_the_standardized_and_batch_corrected_sncRNA_values_for_each_bull_in_the_cohort_for_the_sncRNAs_that_were_pre-selected_by_Random_Forest_/25280919

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/dataset/This_table_lists_the_semen_samples_information_on_their_origin_and_processing_and_the_filed_fertility_corresponding_to_the_bulls_/25280910

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.s002
https://figshare.com/articles/dataset/This_table_lists_the_semen_samples_information_on_their_origin_and_processing_and_the_filed_fertility_corresponding_to_the_bulls_/25280910

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/figure/Data_filtering_strategy_/25280925

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.g001
https://figshare.com/articles/figure/Data_filtering_strategy_/25280925

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/figure/Multiple_factor_analysis_highlights_the_contributions_of_SNPs_CpGs_and_sncRNAs_to_bull_fertility_/25280928

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.g002
https://figshare.com/articles/figure/Multiple_factor_analysis_highlights_the_contributions_of_SNPs_CpGs_and_sncRNAs_to_bull_fertility_/25280928

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/dataset/This_table_lists_the_names_of_the_777_features_that_maximise_the_AUC_in_the_Neural_Networks_Cforest_and_Logistic_Lasso_analyses_that_were_used_for_the_functional_annotation_/25280922

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.s006
https://figshare.com/articles/dataset/This_table_lists_the_names_of_the_777_features_that_maximise_the_AUC_in_the_Neural_Networks_Cforest_and_Logistic_Lasso_analyses_that_were_used_for_the_functional_annotation_/25280922

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/figure/Predictive_accuracy_of_bull_fertility_and_optimal_number_of_features_for_the_different_methods_/25280934

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.g004
https://figshare.com/articles/figure/Predictive_accuracy_of_bull_fertility_and_optimal_number_of_features_for_the_different_methods_/25280934

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/figure/Correlation_structure_among_CpG_and_sncRNA_features_/25280931

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.g003
https://figshare.com/articles/figure/Correlation_structure_among_CpG_and_sncRNA_features_/25280931

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/figure/The_features_selected_are_specific_to_each_method_/25280937

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.g005
https://figshare.com/articles/figure/The_features_selected_are_specific_to_each_method_/25280937

المؤلفون: Valentin Costes, Eli Sellem, Sylvain Marthey, Chris Hoze, Aurélie Bonnet, Laurent Schibler, Hélène Kiefer, Florence Jaffrezic

مصطلحات موضوعية: Cell Biology, Genetics, Ecology, Developmental Biology, Cancer, sperm small non, sperm dna methylation, important economic trait, enable precise predictions, artificial insemination decreases, semen parameters studied, semen parameters measured, semen functional parameters, 11 semen parameters, less relevant features, contrasting fertility levels, multiple factor analysis, mirnas targeted genes, identify infertile bulls, four methodologies mentioned, omics data integration, bull fertility variation, identify subfertile bulls, subfertile semen, four methodologies, omics data, bull fertility, liarde bulls, selected features, male fertility

Relation: https://figshare.com/articles/figure/Functional_analyses_of_selected_features_/25280940

الاتاحة: https://doi.org/10.1371/journal.pone.0298623.g006
https://figshare.com/articles/figure/Functional_analyses_of_selected_features_/25280940

المؤلفون: Hélène Kiefer, Jean-Philippe Perrier

مصطلحات موضوعية: sperm, bull, DNA methylation, epigenetics

Relation: 10344/8664; https://figshare.com/articles/journal_contribution/DNA_methylation_in_bull_spermatozoa_evolutionary_impacts_interindividual_variability_and_contribution_to_the_embryo/19820671

الاتاحة: https://figshare.com/articles/journal_contribution/DNA_methylation_in_bull_spermatozoa_evolutionary_impacts_interindividual_variability_and_contribution_to_the_embryo/19820671

المؤلفون: Jean-Philippe Perrier, David A. Kenny, Aurélie Chaulot-Talmon, Colin J. Byrne, Eli Sellem, Luc Jouneau, Anne Aubert-Frambourg, Laurent Schibler, Hélène Jammes, Patrick Lonergan, Seán Fair, Hélène Kiefer

مصطلحات موضوعية: Bovine, puberty, spermatozoa, DNA methylation

Relation: 10344/9244; https://figshare.com/articles/journal_contribution/Accelerating_onset_of_puberty_through_modification_of_early_life_nutrition_induces_modest_but_persistent_changes_in_bull_sperm_DNA_methylation_profiles_post-puberty/19820797

الاتاحة: https://figshare.com/articles/journal_contribution/Accelerating_onset_of_puberty_through_modification_of_early_life_nutrition_induces_modest_but_persistent_changes_in_bull_sperm_DNA_methylation_profiles_post-puberty/19820797

المؤلفون: Eli Sellem, Sylvain Marthey, Andrea Rau, Luc Jouneau, Aurelie Bonnet, Jean-Philippe Perrier, Sébastien Fritz, Chrystelle Le Danvic, Mekki Boussaha, Hélène Kiefer, Hélène Jammes, Laurent Schibler

المصدر: Epigenetics & Chromatin, Vol 13, Iss 1, Pp 1-28 (2020)

مصطلحات موضوعية: sncRNA, miRNA, isomiR, piRNA, tRNA, Sperm, Genetics, QH426-470

Relation: http://link.springer.com/article/10.1186/s13072-020-00340-0; https://doaj.org/toc/1756-8935; https://doaj.org/article/fe0470cbdb744a6e9df67cf41af2eede

الاتاحة: https://doi.org/10.1186/s13072-020-00340-0
https://doaj.org/article/fe0470cbdb744a6e9df67cf41af2eede