المؤلفون: Hefer, Charles Amadeus

Thesis Advisors: Prof F Joubert, Prof A A Myburg, charles.hefer@up.ac.za

مصطلحات موضوعية: Genomic research projects, Bioinformatics, Dna sequencing technologies, Eucalyptus tree species, UCTD

الاتاحة: http://hdl.handle.net/2263/28833
http://upetd.up.ac.za/thesis/available/etd-10182011-163946/

المؤلفون: Frederick, Joni, Hennessy, Fritha, Horn, Uli, De la Torre Cortes, Pilar, Van den Broek, Marcel, Strych, Ulrich, Willson, Richard, Hefer, Charles Amadeus, Daran, Jean-Marc G., Sewell, Trevor, Otten, Linda G., Brady, Dean

مصطلحات موضوعية: Rhodococci, Gram-positive bacteria, Sequence, Comprehensive description

وصف الملف: application/pdf

Relation: Frederick, J., Hennessy, F., Horn, U. et al. 2020, 'The complete genome sequence of the nitrile biocatalyst Rhodococcus rhodochrous ATCC BAA-870', BMC Genomics, vol. 21, art. 3, pp. 1-19.; 1471-2164 (online); http://hdl.handle.net/2263/74197

الاتاحة: http://hdl.handle.net/2263/74197
https://doi.org/10.1186/s12864-019-6405-7

المؤلفون: Pinard, Desre, Mizrachi, Eshchar, Hefer, Charles Amadeus, Kersting, Anna R., Joubert, Fourie, Douglas, Carl J., Mansfield, Shawn D., Myburg, Alexander Andrew

مصطلحات موضوعية: Carbohydrate active enzymes, Comparative genomics, Transcriptomics, Eucalyptus grandis, Protein domains, Wood formation, Populus trichocarpa

Relation: http://hdl.handle.net/2263/49376; Pinard, D, Mizrachi, E, Hefer, CA, Kersting, AR, Joubert, F, Douglas, CJ, Mansfield, SD & Myburg, AA 2015, 'Comparative analysis of plant carbohydrate active enZymes and their role in xylogenesis', BMC Genomics, vol. 16, art. no. 402, pp. 1-13.

الاتاحة: http://hdl.handle.net/2263/49376
https://doi.org/10.1186/s12864-015-1571-8

المؤلفون: Myburg, Alexander Andrew, Grattapaglia, Dario, Tuskan, Gerald A., Hellsten, Uffe, Hayes, Richard D., Grimwood, Jane, Jenkins, Jerry, Lindquist, Erika, Tice, Hope, Bauer, Diane, Goodstein, David M., Dubchak, Inna, Poliakov, Alexandre, Mizrachi, Eshchar, Kullan, Anand Raj Kumar, Hussey, Steven Grant, Pinard, Desre, Van der Merwe, Karen, Singh, Pooja, Van Jaarsveld, Ida, Silva-Junior, Orzenil B., Togawa, Roberto C., Pappas, Marilia R., Faria, Danielle A., Sansaloni, Carolina P., Petroli, Cesar D., Yang, Xiaohan, Ranjan, Priya, Tschaplinski, Timothy J., Ye, Chu-Yu, Li, Ting, Sterck, Lieven, Vanneste, Kevin, Murat, Florent, Soler, Marcal, Clemente, Helene San, Saidi, Naijib, Cassan-Wang, Hua, Dunand, Christophe, Hefer, Charles Amadeus, Bornberg-Bauer, Erich, Kersting, Anna R., Vining, Kelly, Amarasinghe, Vindhya, Ranik, Martin, Naithani, Sushma, Elser, Justin, Boyd, Alexander E., Liston, Aaron, Spatafora, Joseph W., Dharmwardhana, Palitha, Raja, Rajani, Sullivan, Christopher, Romanel, Elisson, Alves-Ferreira, Marcio, Kulheim, Carsten, Foley, William, Carocha, Victor, Paiva, Jorge, Kudrna, David, Brommonschenkel, Sergio H., Pasquali, Giancarlo, Byrne, Margaret, Rigault, Philippe, Tibbits, Josquin, Spokevicius, Antanas, Jones, Rebecca C., Steane, Dorothy A., Vaillancourt, Rene E., Potts, Brad M., Joubert, Fourie, Barry, Kerrie, Pappas Jr, Georgios J., Strauss, Steven H., Jaiswal, Pankaj, Grima-Pettenati, Jacqueline, Salse, Jerome, Van de Peer, Yves, Rokhsar, Daniel S., Schmutz, Jeremy

مصطلحات موضوعية: Eucalypts, Hardwood trees, Eucalyptus grandis, Diversity

Relation: http://hdl.handle.net/2263/42125; Myburg, AA, Grattapaglia, D, Tuskan, GA, Hellsten, U, Hayes, RD, Grimwood, J, Jenkins, J, Lindquist, E, Tice, H, Bauer, D, Goodstein, DM, Dubchak, I, Poliakov, A, Mizrachi, E, Kullan, ARK, Hussey, SG, Pinard, D, Van der Merwe, K, Singh, P, Van Jaarsveld, I, Silva-Junior, OB, Togawa, RC, Pappas, MR, Faria, DA, Sansaloni, CP, Petroli, CD, Yang, X, Ranjan, P, Tschaplinski, TJ, YE, C-Y, Li, T, Sterck, L, Vanneste, K, Murat, F, Soler, M, Clemente, HS, Saidi, N, Cassan-Wang, H, Dunand, C, Hefer, CA, Bornberg-Bauer, E, Kersting, AR, Vining, K, Amarasinghe, V, Ranik, M, Naithani, S, Elser, J, Boyd, AE, Liston, A, Spatafora, JW, Dharmwardhana, P, Raja, R, Sullivan, C, Romanel, E, Alves-Ferreira, M, Kulheim, C, Foley, W, Carocha, V, Paiva, J, Kudrna, D, Brommonschenkel, SH, Pasquali, G, Byrne, M, Rigault, P, Tibbits, J, Spokevicius, A, Jones, RC, Steane, DA, Vaillancourt, RE, Potts, BM, Joubert, F, Barry, K, Pappas Jr, GJ, Strauss, SH, Jaiswal, P, Grima-Pettenati, J, Salse, J, Van de Peer, Y, Rokhsar, DS & Schmutz, J 2014, 'The genome of Eucalyptus grandis', Nature, vol. 510, pp. 356-362.; 0028--0836 (print); 1476-4687 (online)

الاتاحة: http://hdl.handle.net/2263/42125
https://doi.org/10.1038/nature13308

المؤلفون: Kullan, Anand Raj Kumar, Van Dyk, Maria M., Hefer, Charles Amadeus, Jones, Nicoletta B., Kanzler, Arnulf, Myburg, Alexander Andrew

مصطلحات موضوعية: Growth, Genetic dissection, Wood basic density, Gene expression, Eucalyptus grandis, E. urophylla

وصف الملف: application/pdf; application/vnd.ms-excel

Relation: Kullan et al.: Genetic dissection of growth, wood basic density and gene expression in interspecific backcrosses of Eucalyptus grandis and E. urophylla. BMC Genetics 2012 13:60.; 1471-2156 (online); http://hdl.handle.net/2263/19887

الاتاحة: http://hdl.handle.net/2263/19887
https://doi.org/10.1186/1471-2156-13-60

المؤلفون: Mizrachi, Eshchar, Hefer, Charles Amadeus, Ranik, Martin, Joubert, Fourie, Myburg, Alexander Andrew

مصطلحات موضوعية: Eucalyptus trees, Genetic transcription, Nucleotide sequence, Gene libraries

Relation: http://hdl.handle.net/2263/15884; Mizrachi, E, Hefer, CA, Ranik, M, Joubert F & Myburg, AA 2010, 'De novo assembled expressed gene catalog of a fast-growing Eucalyptus tree produced by Illumina mRNASeq', BMC Genomics, 11: 681. [http://www.biomedcentral.com/bmcgenomics/]

الاتاحة: http://hdl.handle.net/2263/15884
https://doi.org/10.1186/1471-2164-11-681

المؤلفون: Hussey, Steven Grant, Saïdi, Mohammed N., Hefer, Charles Amadeus, Myburg, Alexander Andrew, Grima-Pettenati, Jacqueline

مصطلحات موضوعية: NAC, Transcription factor, Eucalyptus, Evolution, Stress, Wood formation

Relation: http://hdl.handle.net/2263/51287; Hussey, SG, Saidi, MN, Hefer, CA, Myburg, AA & Grima-Pettenati, J 2015, 'Structural, evolutionary and functional analysis of the NAC domain protein family in Eucalyptus', New Phytologist, vol. 206, no. 4, pp. 1337-1350; 0028-646X (print); 1469-8137 (online)

الاتاحة: http://hdl.handle.net/2263/51287
https://doi.org/10.1111/nph.13139

المؤلفون: Mizrachi, Eshchar, Maloney, Victoria J., Silberbauer, Janine Francina, Hefer, Charles Amadeus, Berger, David Kenneth, Mansfield, Shawn D., Myburg, Alexander Andrew

مصطلحات موضوعية: Cellulose, Eucalyptus, Hhemicellulose, Lignin, RNA-seq, Tension wood, Transcriptome, Xylan

Relation: http://hdl.handle.net/2263/51151; Mizrachi, E, Maloney, VJ, Silberbauer, J, Hefer, CA, Berger, DK, Mansfield, SD & Myburg, AA 2015, 'Investigating the molecular underpinnings underlying morphology and changes in carbon partitioning during tension wood formation in Eucalyptus', New Phytologist, vol. 206, no. 4, pp. 1351-1363.; 0028-646X (print); 1469-8137 (online)

الاتاحة: http://hdl.handle.net/2263/51151
https://doi.org/10.1111/nph.13152

المؤلفون: Hefer, Charles Amadeus, Mizrachi, Eshchar, Myburg, Alexander Andrew, Douglas, Carl J., Mansfield, Shawn D.

مصطلحات موضوعية: Eucalyptus grandis, Gene expression, mRNA-Seq, Populus trichocarpa, Secondary cell wall (SCW), Xylem transcriptome

وصف الملف: application/pdf; application/vnd.ms-excel

Relation: Hefer, CA, Mizrachi, E, Myburg, AA, Douglas, CJ & Mansfield, SD 2015, 'Comparative interrogation of the developing xylem transcriptomes of two wood-forming species : populus trichocarpa and Eucalyptus grandis', New Phytologist, vol. 206, no. 4, pp. 1391-1405.; 0028-646X (print); 1469-8137 (online); http://hdl.handle.net/2263/45430

الاتاحة: http://hdl.handle.net/2263/45430
https://doi.org/10.1111/nph.13277

المؤلفون: Van Schalkwyk, Antoinette, Peter, Wenzl, Smit, Sandra, Lopez-Cobollo, Rosa, Kilian, Andrzej, Bishop, Gerard, Hefer, Charles Amadeus, Berger, David Kenneth

مصطلحات موضوعية: Solanum lycopersicum, Bin mapping, Tomato diversity array (DArT) markers, Solanum pennellii, Introgression line (IL), Tomatoes -- Genetics, Gene mapping

Relation: http://hdl.handle.net/2263/19053; Van Schalkwyk, A, Wenzl, P, Smit, S, Lopez-Cobollo, R, Kilian, A, Bishop, G, Hefer, C & Berger, DK, 'Bin mapping of tomato diversity array (DArT) markers to genomic regions of Solanum lycopersicum x Solanum pennellii introgression lines', Theoretical and Applied Genetics, vol. 124, pp. 947–956.; 0040-5752 (print); 1432-2242 (online)

الاتاحة: http://hdl.handle.net/2263/19053
https://doi.org/10.1007/s00122-011-1759-5

المؤلفون: Van Marle-Koster, Este, Hefer, Charles Amadeus, Nel, Louis Hendrik, Groenen, M.A.M.

مصطلحات موضوعية: Native chickens, Microsatellite markers, Genetic variation, Population structure, South Africa

Relation: http://hdl.handle.net/2263/9615; Van Marle-Koster, E, Hefer, CA, Nel, LH, & Groenen, MAM 2008,' Genetic diversity and population structure of locally adapted South African chicken lines : implications for conservation', South African Journal of Animal Science, vol. 38, no. 4, pp. 271-281. [http://www.sasas.co.za/]

الاتاحة: http://hdl.handle.net/2263/9615

المؤلفون: Hefer, Charles Amadeus

المساهمون: Joubert, Fourie, Myburgh, A.A.

مصطلحات موضوعية: Genomic research projects, Bioinformatics, Dna sequencing technologies, Eucalyptus tree species, UCTD

Relation: http://hdl.handle.net/2263/28833; Hefer, CA 2011, Assembly, annotation and polymorphism analysis of a draft transcriptome sequence for a fast-growing Eucalyptus plantation tree, PhD thesis, University of Pretoria, Pretoria, viewed yymmdd < http://hdl.handle.net/2263/28833 >; D11/9/153/ag; http://upetd.up.ac.za/thesis/available/etd-10182011-163946/

الاتاحة: http://hdl.handle.net/2263/28833
http://upetd.up.ac.za/thesis/available/etd-10182011-163946/

المؤلفون: Mafireyi, Godwin

المساهمون: Hefer, Charles Amadeus, Joubert, Fourie

مصطلحات موضوعية: UCTD

Relation: http://hdl.handle.net/2263/72775; Mafireyi, G 2018, A case study for the de novo genome assembly of plant genomes from Illumina short reads, MSc Dissertation, University of Pretoria, Pretoria, viewed yymmdd; S2019

الاتاحة: http://hdl.handle.net/2263/72775