المؤلفون: Garcia-Gonzalez, Natalia, Comas, Joan Colom, Harris, Hugh M. B., Strain, Conall, Stanton, Catherine, Hill, Colin, Corsetti, Aldo, Gahan, Cormac G. M.

المساهمون: Horizon 2020 Framework Programme, Ministero dell’Istruzione, dell’Università e della Ricerca, Science Foundation Ireland

المصدر: Frontiers in Microbiology ; volume 13 ; ISSN 1664-302X

الاتاحة: http://dx.doi.org/10.3389/fmicb.2022.832513
https://www.frontiersin.org/articles/10.3389/fmicb.2022.832513/full

المؤلفون: Perez, Marta, Ntemiri, Alexandra, Tan, Huizi, Harris, Hugh M B, Roager, Henrik Munch, Ribière, Céline, O'Toole, Paul W

المصدر: Perez , M , Ntemiri , A , Tan , H , Harris , H M B , Roager , H M , Ribière , C & O'Toole , P W 2021 , ' A synthetic consortium of 100 gut commensals modulates the composition and function in a colon model of the microbiome of elderly subjects ' , Gut Microbes , vol. 13 , no. 1 , e1919464 . https://doi.org/10.1080/19490976.2021.1919464

مصطلحات موضوعية: /dk/atira/pure/core/keywords/TheFacultyOfScience, Faculty of Science, Gut microbiome, Synthetic microbiome, Consortium, Antibiotics, Alpha-diversity, Elderly, Branched chain amino acids, BCAA

وصف الملف: application/pdf

الاتاحة: https://curis.ku.dk/portal/da/publications/a-synthetic-consortium-of-100-gut-commensals-modulates-the-composition-and-function-in-a-colon-model-of-the-microbiome-of-elderly-subjects(e43245e3-3b6d-4edf-8005-496cd8ffb5ca).html
https://doi.org/10.1080/19490976.2021.1919464
https://curis.ku.dk/ws/files/269513070/Perez_et_al_Gut_Microbes_2021_Vol_13_1_e1919464.pdf

المؤلفون: Harris, Hugh M. B., Hill, Colin

المساهمون: Science Foundation Ireland

المصدر: Frontiers in Microbiology ; volume 11 ; ISSN 1664-302X

الاتاحة: http://dx.doi.org/10.3389/fmicb.2020.604048
https://www.frontiersin.org/articles/10.3389/fmicb.2020.604048/full

المؤلفون: Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O'Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G., Lebeer, Sarah

مصطلحات موضوعية: article, Text, ddc:570, Lactobacillaceae -- lactobacillus -- Pediococcus -- Leuconostocaceae -- Revised Taxonomy

Relation: International Journal of Systematic and Evolutionary Microbiology -- Int J Syst Evol Microbiol -- 1466-5026 -- 1466-5034 -- 1465-2102 -- 2002336-4 -- 2056611-6 -- http://ijs.microbiologyresearch.org/content/journal/ijsem -- http://www.bibliothek.uni-regensburg.de/ezeit/?2056611; https://doi.org/10.1099/ijsem.0.004107; https://www.openagrar.de/receive/openagrar_mods_00058525; https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00028864/W2962.pdf; https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.004107

الاتاحة: https://doi.org/10.1099/ijsem.0.004107
https://www.openagrar.de/receive/openagrar_mods_00058525
https://www.openagrar.de/servlets/MCRFileNodeServlet/openagrar_derivate_00028864/W2962.pdf
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.004107

المؤلفون: Hurley, Eimear, Barrett, Maurice P. J., Kinirons, Martin, Whelton, Helen, Ryan, C. Anthony, Stanton, Catherine, Harris, Hugh M. B., O'Toole, Paul W.

مصطلحات موضوعية: Early childhood caries, Dentine, Saliva, Microbiota, Children

وصف الملف: application/pdf; application/zip

Relation: https://bmcoralhealth.biomedcentral.com/articles/10.1186/s12903-018-0693-1; Hurley, E., Barrett, M.P., Kinirons, M., Whelton, H., Ryan, C.A., Stanton, C., Harris, H.M. and O’Toole, P.W., 2019. Comparison of the salivary and dentinal microbiome of children with severe-early childhood caries to the salivary microbiome of caries-free children. BMC oral health, 19(1), (14 pp.) DOI:10.1186/s12903-018-0693-1; 14; BMC Oral Health; http://hdl.handle.net/10468/7682; 19

الاتاحة: http://hdl.handle.net/10468/7682
https://doi.org/10.1186/s12903-018-0693-1

المؤلفون: Hurley, Eimear, Mullins, David, Barrett, Maurice P. J., O'Shea, Carol Anne, Kinirons, Martin, Ryan, C. Anthony, Stanton, Catherine, Whelton, Helen, Harris, Hugh M. B., O'Toole, Paul W.

مصطلحات موضوعية: Microbiota, Vagina, Skin, Mother, Transmission, Oral cavity, Saliva, Newborn, Infant

وصف الملف: application/pdf

Relation: info:eu-repo/grantAgreement/SFI/SFI Research Centres/12/RC/2273/IE/Alimentary Pharmabiotic Centre (APC) - Interfacing Food & Medicine/; 1599652; Hurley, E., Mullins, D., Barrett, M.P., O’Shea, C.A., Kinirons, M., Ryan, C.A., Stanton, C., Whelton, H., Harris, H.M. and O’Toole, P.W., 2019. The microbiota of the mother at birth and its influence on the emerging infant oral microbiota from birth to 1 year of age: a cohort study. Journal of Oral Microbiology, 11(1), (1599652). DOI:10.1080/20002297.2019.1599652; 19; Journal of Oral Microbiology; http://hdl.handle.net/10468/9104; 11

الاتاحة: http://hdl.handle.net/10468/9104
https://doi.org/10.1080/20002297.2019.1599652

المؤلفون: Harris, Hugh M. B., Ale, Elisa C., Reinheimer, Jorge A., Binetti, Ana G., O'Toole, Paul W.

مصطلحات موضوعية: Lactobacillus fermentum, Exopolysaccharides (EPS), Gene clusters, Genome

وصف الملف: application/pdf

Relation: https://mra.asm.org/content/7/18/e01072-18; e01072-18; Harris, H.M., Ale, E.C., Reinheimer, J.A., Binetti, A.G. and O’Toole, P.W., 2018. Draft Genome Sequence of Lactobacillus fermentum Lf2, an Exopolysaccharide-Producing Strain Isolated from Argentine Cheese. Microbiol Resour Announc, 7(18): e01072-18. DOI:10.1128/mra.01072-18; 18; Microbiology Resource Announcements; http://hdl.handle.net/10468/8279

الاتاحة: http://hdl.handle.net/10468/8279
https://doi.org/10.1128/mra.01072-18

المؤلفون: Salvetti, Elisa, Harris, Hugh M. B., Felis, Giovanna E., O'Toole, Paul W.

المساهمون: Björkroth, Johanna

المصدر: Applied and Environmental Microbiology ; volume 84, issue 17 ; ISSN 0099-2240 1098-5336

الاتاحة: http://dx.doi.org/10.1128/aem.00993-18
https://journals.asm.org/doi/pdf/10.1128/AEM.00993-18

المؤلفون: Salvetti, Elisa, Harris, Hugh M. B., Felis, Giovanna E., O'Toole, Paul W.

المصدر: Applied and Environmental Microbiology ; volume 84, issue 20 ; ISSN 0099-2240 1098-5336

الاتاحة: http://dx.doi.org/10.1128/aem.02052-18
https://journals.asm.org/doi/pdf/10.1128/AEM.02052-18

المؤلفون: Sun, Zhihong, Harris, Hugh M. B, Mccann, Angela, Guo, Chenyi, Argimón, Silvia, Zhang, Wenyi, Yang, Xianwei, Jeffery, Ian B, Cooney, Jakki C, Kagawa, Todd F, Liu, Wenjun, Song, Yuqin, Wrobel, Agnieszka, Rasinkangas, Pia, Parkhill, Julian, Rea, Mary C, O'Sullivan, Orla, Ritari, Jarmo, Douillard, François P, Paul Ross, R, Yang, Ruifu, Briner, Alexandra E, de Vos, Willem M, Barrangou, Rodolphe, Klaenhammer, Todd R, Caufield, Page W, Cui, Yujun, Zhang, Heping, O'Toole, Paul W., SALVETTI, Elisa, FELIS, Giovanna

المساهمون: Sun, Zhihong, Harris, Hugh M. B, Mccann, Angela, Guo, Chenyi, Argimón, Silvia, Zhang, Wenyi, Yang, Xianwei, Jeffery, Ian B, Cooney, Jakki C, Kagawa, Todd F, Liu, Wenjun, Song, Yuqin, Salvetti, Elisa, Wrobel, Agnieszka, Rasinkangas, Pia, Parkhill, Julian, Rea, Mary C, O'Sullivan, Orla, Ritari, Jarmo, Douillard, François P, Paul Ross, R, Yang, Ruifu, Briner, Alexandra E, Felis, Giovanna, de Vos, Willem M, Barrangou, Rodolphe, Klaenhammer, Todd R, Caufield, Page W, Cui, Yujun, Zhang, Heping, O'Toole, Paul W.

مصطلحات موضوعية: Lactobacillus, comparative genomics, biotechnology

وصف الملف: ELETTRONICO

Relation: info:eu-repo/semantics/altIdentifier/pmid/26415554; info:eu-repo/semantics/altIdentifier/wos/WOS:000363020800006; volume:6; firstpage:1; lastpage:13; numberofpages:13; journal:NATURE COMMUNICATIONS; http://hdl.handle.net/11562/927705; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84942895870; http://www.nature.com/ncomms/2015/150929/ncomms9322/full/ncomms9322.html

الاتاحة: http://hdl.handle.net/11562/927705
https://doi.org/10.1038/ncomms9322
http://www.nature.com/ncomms/2015/150929/ncomms9322/full/ncomms9322.html

المؤلفون: O'Donnell, Michelle M., Harris, Hugh M. B., Ross, R. Paul, O'Toole, Paul W.

مصطلحات موضوعية: Diet, Herbivore, Hindgut, Microbiota, Monogastric, Ruminant

وصف الملف: application/pdf; application/vnd.openxmlformats-officedocument.wordprocessingml.document

Relation: info:eu-repo/grantAgreement/SFI/SFI Principal Investigator Programme (PI)/07/IN.1/B1780/IE/Functional genomics of two commensal lactobacilli from humans and animals/; e509; O'Donnell, M. M., Harris, H. M. B., Ross, R. P. and O'Toole, P. W. (2017) 'Core fecal microbiota of domesticated herbivorous ruminant, hindgut fermenters, and monogastric animals', Microbiology Open, e509 (11pp). doi:10.1002/mbo3.509; 11; Microbiology Open; http://hdl.handle.net/10468/4895

الاتاحة: http://hdl.handle.net/10468/4895
https://doi.org/10.1002/mbo3.509

المؤلفون: Cousin, Fabien J., Lynch, Denise B., Victoria, Chuat, Bourin, Maxence J. B., Casey, Pat G., Dalmasso, Marion, Harris, Hugh M. B., McCann, Angela, O'Toole, Paul W.

مصطلحات موضوعية: L. salivarius, Megaplasmid, Lactobacillus, RNA-seq, Non-coding RNA

وصف الملف: application/pdf

Relation: info:eu-repo/grantAgreement/SFI/SFI Research Centres/12/RC/2273/IE/Alimentary Pharmabiotic Centre (APC) - Interfacing Food & Medicine/; https://mgen.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000126; 000126; Cousin, F.J., Lynch, D.B., Chuat, V., Bourin, M.J., Casey, P.G., Dalmasso, M., Harris, H.M., McCann, A. and O’toole, P.W., 2017. A long and abundant non-coding RNA in Lactobacillus salivarius. Microbial genomics, 3(9). (000126). DOI:10.1099/mgen.0.000126; 14; Microbial Genomics; http://hdl.handle.net/10468/9116

الاتاحة: http://hdl.handle.net/10468/9116
https://doi.org/10.1099/mgen.0.000126

المؤلفون: Sun, Zhihong, Harris, Hugh M. B., McCann, Angela, Guo, Chenyi, Argimon, Silvia, Zhang, Wenyi, Yang, Xianwei, Jeffery, Ian B., Cooney, Jakki C., Kagawa, Todd F., Liu, Wenjun, Song, Yuqin, Salvetti, Elisa, Wrobel, Agnieszka, Rasinkangas, Pia, Parkhill, Julian, Rea, Mary C., O'Sullivan, Orla, Ritari, Jarmo, Douillard, Francois P., Ross, R. Paul, Yang, Ruifu, Briner, Alexandra E., Felis, Giovanna E., de Vos, Willem M., Barrangou, Rodolphe, Klaenhammer, Todd R., Caufield, Page W., Cui, Yujun, Zhang, Heping, O'Toole, Paul W.

المساهمون: Research Programs Unit, Departments of Faculty of Veterinary Medicine, Veterinary Biosciences, Willem Meindert Vos de / Principal Investigator, de Vos & Salonen group

مصطلحات موضوعية: LACTIC-ACID BACTERIA, CRISPR-CAS SYSTEMS, MULTIPLE SEQUENCE ALIGNMENT, GLYCOSIDE HYDROLASE FAMILY, GRAM-POSITIVE BACTERIA, PHYLOGENETIC ANALYSIS, GENUS LACTOBACILLUS, MOLECULAR-CLONING, PROTEIN, PROBIOTICS, Veterinary science

وصف الملف: application/pdf

Relation: Work in laboratories of P.W.O'T. and P.W.C. was supported by an R01 award from the US National Institute of Dental and Craniofacial Research (R01DE019455). P.W.O'T. was also supported by Science Foundation Ireland through Principal Investigator Award 07-IN.1-B1780, and by a Centre award to the Alimentary Pharmabiotic Centre (grant number SFI/12/RC/2273). Work in Huhhot was supported by the National Natural Science Foundation of China (grant code 31430066), and in Beijing by the State Key Development Program for Basic Research of China (grant code 2015CB554202). Work in Helsinki was supported by the Academy of Finland (Grants 141140 and 252123 to W.M.deV. and F.P.D.) and the European Research Council (Advanced Grant 250172 to W.M.deV.). We also acknowledge Dr Fabien Cousin for his useful advice on the most up-to-date Lactobacillus species reclassifications.; Sun , Z , Harris , H M B , McCann , A , Guo , C , Argimon , S , Zhang , W , Yang , X , Jeffery , I B , Cooney , J C , Kagawa , T F , Liu , W , Song , Y , Salvetti , E , Wrobel , A , Rasinkangas , P , Parkhill , J , Rea , M C , O'Sullivan , O , Ritari , J , Douillard , F P , Ross , R P , Yang , R , Briner , A E , Felis , G E , de Vos , W M , Barrangou , R , Klaenhammer , T R , Caufield , P W , Cui , Y , Zhang , H & O'Toole , P W 2015 , ' Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera ' , Nature Communications , vol. 6 , 8322 . https://doi.org/10.1038/ncomms9322; http://hdl.handle.net/10138/165265; 236dbcd4-1d87-45dd-bac1-1911d219b6c3; 84942895870; 000363020800006

الاتاحة: http://hdl.handle.net/10138/165265

المؤلفون: O. Sheridan, Paul, Martin, Jennifer C., Lawley, Trevor D., Browne, Hilary P., Harris, Hugh M. B., Bernalier, Annick, Duncan, Sylvia H., O'Toole, Paul W., P. Scott, Karen, J. Flint, Harry

المساهمون: Rowett Institute of Nutrition and Health, University of Aberdeen, The Wellcome Trust Sanger Institute Cambridge, Department of Microbiology & Alimentary Pharmabiotic Centre, University College Cork (UCC), Microbiologie Environnement Digestif Santé (MEDIS), INRA Clermont-Ferrand-Theix-Université Clermont Auvergne 2017-2020 (UCA 2017-2020 )

المصدر: ISSN: 2057-5858.

مصطلحات موضوعية: carbohydrate, comparative genomics, gut microbiota, obligate anaerobe, roseburia, glucide, génomique comparative, microbiote digestif, lachnospiraceae, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology

Relation: hal-01604326; https://hal.archives-ouvertes.fr/hal-01604326; https://hal.archives-ouvertes.fr/hal-01604326/document; https://hal.archives-ouvertes.fr/hal-01604326/file/SHERIDAN_MicrobialGenomics_2016_1.pdf; PRODINRA: 385324; WOS: 000431153400001

الاتاحة: https://hal.archives-ouvertes.fr/hal-01604326
https://hal.archives-ouvertes.fr/hal-01604326/document
https://hal.archives-ouvertes.fr/hal-01604326/file/SHERIDAN_MicrobialGenomics_2016_1.pdf
https://doi.org/10.1099/mgen.0.000043

المؤلفون: O'Donnell, Michelle M., Harris, Hugh M. B., O'Toole, Paul W., Ross, R. Paul

المصدر: Genome Announcements ; volume 2, issue 1 ; ISSN 2169-8287

الاتاحة: http://dx.doi.org/10.1128/genomea.01155-13
https://journals.asm.org/doi/pdf/10.1128/genomeA.01155-13

المؤلفون: Neville, B. Anne, Sheridan, Paul O., Harris, Hugh M. B., Coughlan, Simone, Flint, Harry J., Duncan, Sylvia H., Jeffery, Ian B., Claesson, Marcus J., Ross, R. Paul, Scott, Karen P., O'Toole, Paul W.

المساهمون: Ahmed, Niyaz

المصدر: PLoS ONE ; volume 8, issue 7, page e68919 ; ISSN 1932-6203

الاتاحة: http://dx.doi.org/10.1371/journal.pone.0068919
http://dx.plos.org/10.1371/journal.pone.0068919

المؤلفون: Tottey, William, Denonfoux, Jeremie, Jaziri, Faouzi, Parisot, Nicolas, Missaoui, Mohiedine, Hill, David, Borrel, Guillaume, Peyretaillade, Eric, Alric, Monique, Harris, Hugh M. B., Jeffery, Ian B., Claesson, Marcus J., O'Toole, Paul W., Peyret, Pierre, Brugère, Jean-François

المساهمون: Liles, Mark R.

المصدر: PLoS ONE ; volume 8, issue 5, page e62544 ; ISSN 1932-6203

الاتاحة: http://dx.doi.org/10.1371/journal.pone.0062544
http://dx.plos.org/10.1371/journal.pone.0062544

المؤلفون: Borrel, Guillaume, Harris, Hugh M. B., Parisot, Nicolas, Gaci, Nadia, Tottey, William, Mihajlovski, Agnès, Deane, Jennifer, Gribaldo, Simonetta, Bardot, Olivier, Peyretaillade, Eric, Peyret, Pierre, O'Toole, Paul W., Brugère, Jean-François

المصدر: Genome Announcements ; volume 1, issue 4 ; ISSN 2169-8287

الاتاحة: http://dx.doi.org/10.1128/genomea.00453-13
https://journals.asm.org/doi/pdf/10.1128/genomeA.00453-13

المؤلفون: Power, Susan E., Harris, Hugh M. B., Bottacini, Francesca, Ross, R. Paul, O'Toole, Paul W., Fitzgerald, Gerald F.

المصدر: Genome Announcements ; volume 1, issue 6 ; ISSN 2169-8287

الاتاحة: http://dx.doi.org/10.1128/genomea.01070-13
https://journals.asm.org/doi/pdf/10.1128/genomeA.01070-13

المؤلفون: Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O'Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G., Lebeer, Sarah

مصطلحات موضوعية: Lacticaseibacillus casei, Lacticaseibacillus, Bacteria, Lactobacillales, Lactobacillaceae, Firmicutes, Biodiversity, Bacilli, Taxonomy

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7130067f1e9e6d371dcb106c90d98298