المؤلفون: Ragnhild Reehorst Lereim, Petra Nytrova, Astrid Guldbrandsen, Eva Kubala Havrdova, Kjell-Morten Myhr, Harald Barsnes, Frode S Berven

المصدر: PLoS ONE, Vol 19, Iss 3, p e0300914 (2024)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0300914&type=printable; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/6f42bd6b46a240189c2680da823bc02c

المؤلفون: Eystein Oveland, Intakhar Ahmad, Ragnhild Reehorst Lereim, Ann Cathrine Kroksveen, Harald Barsnes, Astrid Guldbrandsen, Kjell-Morten Myhr, Lars Bø, Frode S. Berven, Stig Wergeland

المصدر: Scientific Reports, Vol 11, Iss 1, Pp 1-16 (2021)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2045-2322

URL الوصول: https://doaj.org/article/84b83fd96e1d4449be897044b5da5617

المؤلفون: Harald Barsnes, Marc Vaudel, Carlos Horro, Yehia Farag

المصدر: Journal of Proteome Research

مصطلحات موضوعية: Proteomics, Web server, Source code, Computer science, media_common.quotation_subject, interaction, computer.software_genre, Biochemistry, Mass Spectrometry, Technical Note, Web application, Interactive visualization, visualization, media_common, Internet, Data processing, User Friendly, Database, business.industry, Computational Biology, General Chemistry, Visualization, Galaxy, Identification (information), business, computer, data processing, Software

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a0267c4bfa90d7f15c6d75ecc7367b5f
https://doi.org/10.1021/acs.jproteome.1c00678

المؤلفون: Luis Francisco Hernández Sánchez, Bram Burger, Rodrigo Alexander Castro Campos, Stefan Johansson, Pål Rasmus Njølstad, Harald Barsnes, Marc Vaudel

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::65364afb961db52f3b64a6e2c5135b71
https://doi.org/10.1101/2022.09.06.506730

المؤلفون: Astrid Guldbrandsen, Eystein Oveland, Ann Cathrine Kroksveen, Frode S. Berven, Lars Bø, Kjell-Morten Myhr, Stig Wergeland, Ragnhild Reehorst Lereim, Harald Barsnes, Intakhar Ahmad

المصدر: Scientific Reports, Vol 11, Iss 1, Pp 1-16 (2021)
Scientific Reports

مصطلحات موضوعية: Proteomics, Adult, Male, Pathology, medicine.medical_specialty, Encephalomyelitis, Autoimmune, Experimental, Multiple Sclerosis, Proteome, Science, Neuroimmunology, Quantitative proteomics, Legumain, Article, Lesion, Cuprizone, Mice, Young Adult, Hemopexin, medicine, Animals, Humans, Remyelination, Aged, Aged, 80 and over, Multidisciplinary, biology, Complement C1q, Multiple sclerosis, Experimental autoimmune encephalomyelitis, Middle Aged, medicine.disease, Immunohistochemistry, Cellular neuroscience, Protein-protein interaction networks, Frontal Lobe, Cysteine Endopeptidases, medicine.anatomical_structure, Gene Expression Regulation, biology.protein, Diseases of the nervous system, Medicine, Female, Microglia, medicine.symptom, Biomarkers

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c42f68676765d052d733f77c467ec398
https://doaj.org/article/84b83fd96e1d4449be897044b5da5617

المؤلفون: Harald Barsnes, Marc Vaudel, Bram Burger

المصدر: Journal of Proteome Research

مصطلحات موضوعية: Proteomics, 0301 basic medicine, experimental design, Randomization, Computer science, Sample (statistics), randomization, Blocking (statistics), Machine learning, computer.software_genre, Biochemistry, Random Allocation, 03 medical and health sciences, Feature (machine learning), sample handling, Sample handling, 030102 biochemistry & molecular biology, business.industry, blocking, General Chemistry, 030104 developmental biology, batches, Research Design, Perspective, Artificial intelligence, business, computer

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4d812b34d791a1ea9546515a870ceedf
https://doi.org/10.1021/acs.jproteome.0c00536

المؤلفون: Harald Barsnes, Marc Vaudel, Kenneth Verheggen, Helge Ræder, Frode S. Berven, Lennart Martens

المصدر: Mass spectrometry reviews

مصطلحات موضوعية: Proteomics, 0301 basic medicine, Bioinformatics, computer.software_genre, Search engine, 01 natural sciences, Mass Spectrometry, General Biochemistry, Genetics and Molecular Biology, Workflow, Analytical Chemistry, 03 medical and health sciences, Component (UML), Animals, Humans, Database search engine, Shotgun proteomics, Spectroscopy, Information retrieval, Sequence database, Chemistry, 010401 analytical chemistry, Proteins, Condensed Matter Physics, 0104 chemical sciences, Search Engine, Software framework, Identification (information), ComputingMethodologies_PATTERNRECOGNITION, 030104 developmental biology, computer

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4f5a8d1521a717fcfae4c8fe77b1f80b
https://doi.org/10.1002/mas.21543

المؤلفون: Lennart Martens, Yasset Perez-Riverol, Harald Barsnes, Timo Sachsenberg, Niels Hulstaert, Mathias Walzer, Jim Shofstahl

المصدر: J Proteome Res
Journal of Proteome Research
537–542

مصطلحات موضوعية: Proteomics, 0301 basic medicine, Saccharomyces cerevisiae Proteins, Computer science, Interface (Java), Big data, Cloud computing, computer.software_genre, Biochemistry, Article, Workflow, 03 medical and health sciences, Cross-platform, Databases, Protein, 030102 biochemistry & molecular biology, business.industry, Computational Biology, General Chemistry, Modular design, File format, 030104 developmental biology, Scalability, Operating system, business, computer, Software

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a9180999ee90467b92541938fb720f01
https://doi.org/10.1021/acs.jproteome.9b00328

المؤلفون: Ragnhild Reehorst Lereim, Frode S. Berven, Harald Barsnes, Bram Burger

المصدر: European Journal of Mass Spectrometry

مصطلحات موضوعية: Proteomics, chemistry.chemical_classification, 0303 health sciences, Chemistry, General Medicine, Computational biology, Mass spectrometry, Tandem mass tag, Mass Spectrometry, Atomic and Molecular Physics, and Optics, Amino acid, 03 medical and health sciences, 0302 clinical medicine, Small peptide, Isobaric process, Amino Acids, Peptides, 030217 neurology & neurosurgery, Spectroscopy, 030304 developmental biology

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f8dee5c22df4dc9cc31ad59e44871645
https://doi.org/10.1177/1469066719857006

المؤلفون: Bram Burger, Marc Vaudel, Harald Barsnes

المصدر: kxac014
Biostatistics

مصطلحات موضوعية: Statistics and Probability, General Medicine, Statistics, Probability and Uncertainty

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::af5fcb12395f317a24d821a94eac9530
https://pubmed.ncbi.nlm.nih.gov/35536588

المؤلفون: Ann C. Kroksveen, Hilde Garberg, Astrid Guldbrandsen, Ragnhild Reehorst Lereim, Frode S. Berven, Harald Barsnes, Mari Jacobsen

المصدر: Clinical Proteomics
17:33

مصطلحات موضوعية: 0301 basic medicine, Proteomics, Stability test, Clinical Biochemistry, Computational biology, Disease, Multiple sclerosis, 03 medical and health sciences, 0302 clinical medicine, Cerebrospinal fluid, Medicine, Molecular Biology, business.industry, Research, Significant difference, Assay development, General Medicine, Biomarker, medicine.disease, Targeted proteomics, 030104 developmental biology, Parallel reaction monitoring, Molecular Medicine, Biomarker (medicine), business, 030217 neurology & neurosurgery, Neurological diseases

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::89e5c0f11dc7297cac857439ed6809bf
http://europepmc.org/articles/PMC7499868

المؤلفون: Richard Côté, Florian Reisinger, Lennart Martens, Harald Barsnes, Juan Antonio Vizcaino, Henning Hermjakob

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/25/b5/Nucleic_Acids_Res_2010_Jul_1_38(Web_Server_issue)_W155-W160.tar.gz

وصف الملف: application/zip

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.354.9444

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.354.9444

المؤلفون: Juan Antonio Vizcaı́no, Florian Reisinger, Harald Barsnes, Joseph M. Foster, Jonathan Rameseder, Henning Hermjakob, Lennart Martens

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://nar.oxfordjournals.org/content/early/2009/11/11/nar.gkp964.full.pdf.

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.565.5630; http://nar.oxfordjournals.org/content/early/2009/11/11/nar.gkp964.full.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.565.5630
http://nar.oxfordjournals.org/content/early/2009/11/11/nar.gkp964.full.pdf

المؤلفون: Juan Antonio Vizcaíno, Richard Côté, Florian Reisinger, Harald Barsnes, Joseph M. Foster, Jonathan Rameseder, Henning Hermjakob, Lennart Martens

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/1c/7a/Nucleic_Acids_Res_2010_Jan_38(Database_issue)_D736-D742.tar.gz

وصف الملف: application/zip

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.356.8685

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.356.8685

المؤلفون: Bmc Bioinformatics, Harald Barsnes, Svein-ole Mikalsen, Ingvar Eidhammer, Open Access

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/e1/b8/BMC_Bioinformatics_2006_Jan_26_7_42.tar.gz

وصف الملف: application/zip

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.277.567

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.277.567

المؤلفون: Harald Barsnes, Tim Van Den Bossche, Bernhard Y. Renard, Lennart Martens, Kay Schallert, Dirk Benndorf, Peter Dawyndt, Bart Mesuere, Pieter Verschaffelt, Thilo Muth

المصدر: JOURNAL OF PROTEOME RESEARCH
Journal of Proteome Research

مصطلحات موضوعية: 0301 basic medicine, Data Analysis, Proteomics, Data processing, 030102 biochemistry & molecular biology, Downstream (software development), Proteome, CHALLENGES, software, Microbiota, Biology and Life Sciences, General Chemistry, Biochemistry, Data science, Field (computer science), 03 medical and health sciences, Chemistry, 030104 developmental biology, TANDEM, End-to-end principle, Functional annotation, Metaproteomics, metaproteomics, Software, pipelines

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ac156a0dcfc4af46d951619b21eea967
https://biblio.ugent.be/publication/8667510

المؤلفون: Astrid, Guldbrandsen, Yehia Mokhtar, Farag, Ragnhild Reehorst, Lereim, Frode S, Berven, Harald, Barsnes

المصدر: Methods in molecular biology (Clifton, N.J.). 2044

مصطلحات موضوعية: Proteomics, Multiple Sclerosis, Proteome, Alzheimer Disease, Data Mining, Humans, Cerebrospinal Fluid Proteins, Parkinson Disease, Databases, Protein, Peptides, Biomarkers, Mass Spectrometry

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::1a8a9240b423f3ecb7ccf06a16961268
https://pubmed.ncbi.nlm.nih.gov/31432427

المؤلفون: Rohit N. Kulkarni, Steven P. Gygi, Andreas Alvin Purnomo Soetedjo, Adrian Kee Keong Teo, Yngvild Bjørlykke, Helge Ræder, Joanita Binte Jasmen, Larry Sai Weng Loo, Heidrun Vethe, Ivan Achel Valdez, Nicholas Jackson, Harald Barsnes, Joao A. Paulo, Marc Vaudel

المصدر: Stem Cells

مصطلحات موضوعية: 0301 basic medicine, Pluripotent Stem Cells, Proteomics, Hippo signaling pathway, Proteome, Cellular differentiation, Quantitative proteomics, Cell Differentiation, Cell Biology, Computational biology, Biology, Cell fate determination, Article, 03 medical and health sciences, 030104 developmental biology, 0302 clinical medicine, Molecular Medicine, Humans, Stem cell, Induced pluripotent stem cell, Pancreas, 030217 neurology & neurosurgery, Developmental Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bc131314afac52a01a7b5b533725266c
https://pubmed.ncbi.nlm.nih.gov/31828876

المؤلفون: Rohit N. Kulkarni, Vilas Wagh, Sevim Kahraman, Heidrun Vethe, Tomozumi Takatani, Masaji Sakaguchi, Harald Barsnes, Jun Shirakawa, Jiang Hu, Tata Nageswara Rao, Helge Ræder, Manoj K. Gupta, Marc Vaudel, Samir Softic, Yngvild Bjørlykke, Rachael Martinez

المصدر: Stem Cell Reports

مصطلحات موضوعية: 0301 basic medicine, Proteomics, STAT3 Transcription Factor, Neurogenesis, Induced Pluripotent Stem Cells, Biology, Biochemistry, Article, STAT3, 03 medical and health sciences, Mice, 0302 clinical medicine, Directed differentiation, Downregulation and upregulation, EIF4E, Genetics, Animals, cancer, Cell Lineage, Induced pluripotent stem cell, leptin receptor, Gene Editing, Mice, Knockout, Leptin receptor, diabetes, Gene Expression Regulation, Developmental, Proteins, Cell Differentiation, Cell Biology, Fibroblasts, neuronal lineage, pluripotency, Embryonic stem cell, Cell biology, 030104 developmental biology, Eukaryotic Initiation Factor-4E, Protein Biosynthesis, embryonic development, biology.protein, Metabolome, Receptors, Leptin, CRISPR-Cas Systems, 030217 neurology & neurosurgery, Developmental Biology, Signal Transduction

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eeb762259428e5bc63b7650a4f3eb1b9
https://pubmed.ncbi.nlm.nih.gov/33125875

المؤلفون: Peter R. Baker, Harald Barsnes, Jimmy K. Eng, Luis Mendoza, Yasset Perez-Riverol, Martin Eisenacher, Tim Van Den Bossche, Robert J. Chalkley, Jim Shofstahl, Sean L. Seymour, Luis Francisco Hernández Sánchez, Juan Antonio Vizcaíno, Gerhard Mayer, Pierre-Alain Binz, Andrew Collins, Eric W. Deutsch, Emanuele Alpi, Lydie Lane, Eugene A. Kapp, Gerben Menschaert, Karl R. Clauser

مصطلحات موضوعية: 0303 health sciences, Information retrieval, Proteomics Standards Initiative, NeXtProt, Computer science, 030302 biochemistry & molecular biology, FASTA format, Proteomics, File format, Proteogenomics, Mass spectrometry, Metadata, 03 medical and health sciences, Validator, UniProt, 030304 developmental biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7352d902fcd9021bd2a3bc83855d0bde