المؤلفون: Nitasha D. Menon, Saugat Poudel, Anand V. Sastry, Kevin Rychel, Richard Szubin, Nicholas Dillon, Hannah Tsunemoto, Yujiro Hirose, Bipin G. Nair, Geetha B. Kumar, Bernhard O. Palsson, Victor Nizet

المصدر: mSystems, Vol 9, Iss 2 (2024)

مصطلحات موضوعية: Acinetobacter baumannii, transcriptional regulation, iModulon, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2379-5077

URL الوصول: https://doaj.org/article/94cc886308844dd1afb7b91c45f6d4d8

المؤلفون: Hannah Tsunemoto, Joseph Sugie, Eray Enustun, Kit Pogliano, Joe Pogliano

المصدر: PLoS ONE, Vol 18, Iss 7, p e0280070 (2023)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0280070&type=printable; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/8ef4fd6c9ecf416f90de66051a66cab2

المؤلفون: Erlinda R. Ulloa, Armin Kousha, Hannah Tsunemoto, Joe Pogliano, Carmelo Licitra, John J. LiPuma, George Sakoulas, Victor Nizet, Monika Kumaraswamy, Stijn van der Veen

المصدر: Infectious Microbes & Diseases, Vol 2, Iss 1, Pp 10-17 (2020)

مصطلحات موضوعية: Infectious and parasitic diseases, RC109-216

وصف الملف: electronic resource

Relation: http://journals.lww.com/10.1097/IM9.0000000000000014; https://doaj.org/toc/2641-5917

URL الوصول: https://doaj.org/article/e139874f187347c2ba38af81490aca61

المؤلفون: Nicholas Dillon, Michelle Holland, Hannah Tsunemoto, Bryan Hancock, Ingrid Cornax, Joe Pogliano, George Sakoulas, Victor Nizet

المصدر: EBioMedicine, Vol 46, Iss , Pp 193-201 (2019)

مصطلحات موضوعية: Medicine, Medicine (General), R5-920

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352396419304839; https://doaj.org/toc/2352-3964

URL الوصول: https://doaj.org/article/f8299bfd792e440396803214831a1bbf

المؤلفون: Michael J. Salazar, Henrique Machado, Nicholas A. Dillon, Hannah Tsunemoto, Richard Szubin, Samira Dahesh, Joseph Pogliano, George Sakoulas, Bernhard O. Palsson, Victor Nizet, Adam M. Feist

المصدر: mSystems, Vol 5, Iss 2 (2020)

مصطلحات موضوعية: Staphylococcus aureus, antibiotic resistance, nafcillin, USA300, adaptive laboratory evolution, drug resistance mechanisms, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2379-5077

URL الوصول: https://doaj.org/article/87e85fc604b34bc8ba13b69e385db06f

المؤلفون: Yara Seif, Jonathan M Monk, Nathan Mih, Hannah Tsunemoto, Saugat Poudel, Cristal Zuniga, Jared Broddrick, Karsten Zengler, Bernhard O Palsson

المصدر: PLoS Computational Biology, Vol 15, Iss 1, p e1006644 (2019)

مصطلحات موضوعية: Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

URL الوصول: https://doaj.org/article/c6f098ce42454bc2b59f14de7f90b918

المؤلفون: Dongxu, Sun, Ruslan, Tsivkovski, Joe, Pogliano, Hannah, Tsunemoto, Kirk, Nelson, Debora, Rubio-Aparicio, Olga, Lomovskaya

المصدر: Antimicrobial agents and chemotherapy. 66(10)

مصطلحات موضوعية: Klebsiella pneumoniae, Carbapenems, Pseudomonas aeruginosa, Escherichia coli, Serine, Penicillin-Binding Proteins, Meropenem, Microbial Sensitivity Tests, beta-Lactams, beta-Lactamases, Anti-Bacterial Agents, Monobactams

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::9752c54a8080f4ae679e65bb7031fccf
https://pubmed.ncbi.nlm.nih.gov/36102663

المؤلفون: Lucy Catteau, Yvan Diaz Iglesias, Hannah Tsunemoto, Joseph Pogliano, Françoise Van Bambeke, Victor Nizet, George Sakoulas

المصدر: International Journal of Antimicrobial Agents. 61:106758

مصطلحات موضوعية: Microbiology (medical), Infectious Diseases, Pharmacology (medical), General Medicine

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::034fbc49c138377949c6b81d99da32d6
https://doi.org/10.1016/j.ijantimicag.2023.106758

المؤلفون: Akanksha Rajput, Hannah Tsunemoto, Anand V. Sastry, Richard Szubin, Kevin Rychel, Siddharth M. Chauhan, Joe Pogliano, Bernhard O. Palsson

المصدر: Nucleic acids research, vol 50, iss 17
Rajput, A, Tsunemoto, H, Sastry, A V, Szubin, R, Rychel, K, Chauhan, S M, Pogliano, J & Palsson, B O 2022, ' Advanced transcriptomic analysis reveals the role of efflux pumps and media composition in antibiotic responses of Pseudomonas aeruginosa ', Nucleic Acids Research, vol. 50, no. 17, pp. 9675-9688 . https://doi.org/10.1093/nar/gkac743

مصطلحات موضوعية: Cystic Fibrosis, Gene Expression Profiling, Biological Sciences, beta-Lactams, Anti-Bacterial Agents, Rare Diseases, Infectious Diseases, Bacterial Proteins, 5.1 Pharmaceuticals, Biofilms, Information and Computing Sciences, Pseudomonas aeruginosa, Genetics, Humans, 2.2 Factors relating to the physical environment, 2.1 Biological and endogenous factors, Pseudomonas Infections, Antimicrobial Resistance, Development of treatments and therapeutic interventions, Aetiology, Infection, Lung, Environmental Sciences, Developmental Biology

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4bae7dfef9c3821742db01d9c03b19c1
https://doi.org/10.1101/2022.04.04.487074

المؤلفون: Akanksha Rajput, Hannah Tsunemoto, Anand V Sastry, Richard Szubin, Kevin Rychel, Joseph Sugie, Joe Pogliano, Bernhard O Palsson

المصدر: Rajput, A, Tsunemoto, H, Sastry, A V, Szubin, R, Rychel, K, Sugie, J, Pogliano, J & Palsson, B O 2022, ' Machine learning from Pseudomonas aeruginosa transcriptomes identifies independently modulated sets of genes associated with known transcriptional regulators ', Nucleic Acids Research, vol. 50, no. 7, pp. 3658-3672 . https://doi.org/10.1093/nar/gkac187
Nucleic acids research, vol 50, iss 7

مصطلحات موضوعية: Cystic Fibrosis, Bacterial, Gene Expression Regulation, Bacterial, Biological Sciences, Machine Learning, Rare Diseases, Gene Expression Regulation, Bacterial Proteins, Information and Computing Sciences, Pseudomonas aeruginosa, Genetics, Escherichia coli, 2.2 Factors relating to the physical environment, Aetiology, Transcriptome, Lung, Environmental Sciences, Biotechnology, Developmental Biology, Transcription Factors

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0393eb3a9d40f50367ae0cfe76df1338
https://orbit.dtu.dk/en/publications/bbe33946-3324-49b6-abdb-2982c2ea4607

المؤلفون: Jason F. Nideffer, Adam B. Shapiro, Joe Pogliano, Hannah Tsunemoto, Eray Enustun, Elizabeth T. Montaño, Kit Pogliano, Joseph Sugie, Alan I. Derman

المصدر: Journal of Bacteriology. 203

مصطلحات موضوعية: DNA synthesis, medicine.drug_class, Antibiotics, DNA replication, Biology, medicine.disease_cause, Microbiology, Thymidylate kinase, In vitro, Mechanism of action, Biochemistry, In vivo, medicine, medicine.symptom, Molecular Biology, Escherichia coli

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::e9d63c9844e150d94c9bd91001f70465
https://doi.org/10.1128/jb.00105-21

المؤلفون: Erlinda R. Ulloa, Armin Kousha, Hannah Tsunemoto, Joe Pogliano, Carmelo Licitra, John J. LiPuma, George Sakoulas, Victor Nizet, Monika Kumaraswamy, Stijn van der Veen

المصدر: Infectious Microbes & Diseases, Vol 2, Iss 1, Pp 10-17 (2020)

مصطلحات موضوعية: Innate immune system, biology, business.industry, medicine, Infectious and parasitic diseases, RC109-216, Achromobacter xylosoxidans, biology.organism_classification, Azithromycin, business, Microbiology, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9ff37fa8d785f1c2be194f2d96a5791f
https://doi.org/10.1097/im9.0000000000000014

المؤلفون: George Sakoulas, Hannah Tsunemoto, Erlinda R. Ulloa, Nicholas Dillon, Victor Nizet, Joe Pogliano

المصدر: The Journal of Infectious Diseases

مصطلحات موضوعية: medicine.drug_class, Klebsiella pneumoniae, Avibactam, Antibiotics, Microbial Sensitivity Tests, beta-Lactamases, Microbiology, Major Articles and Brief Reports, Mice, 03 medical and health sciences, chemistry.chemical_compound, Antibiotic testing, Drug Resistance, Multiple, Bacterial, medicine, Animals, Humans, Immunology and Allergy, avibactam, innate immunity, 030304 developmental biology, platelet, 0303 health sciences, Innate immune system, Carbapenem resistant, biology, 030306 microbiology, business.industry, neutrophil, New Delhi metallo-β-lactamase (NDM), Antimicrobial, biology.organism_classification, non–β-lactam β-lactamase inhibitors, human serum, Immunity, Innate, Anti-Bacterial Agents, Klebsiella Infections, 3. Good health, Mice, Inbred C57BL, Carbapenem-Resistant Enterobacteriaceae, Infectious Diseases, Carbapenems, chemistry, Female, Cathelicidin antimicrobial peptide, Bacterias, business, Azabicyclo Compounds

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::12ee504dcd617b3e6d6e11da6ee338e1
https://doi.org/10.1093/infdis/jiz128

المؤلفون: Akanksha Rajput, Richard Szubin, Hannah Tsunemoto, Kevin Rychel, Joe Pogliano, Anand V. Sastry, Joseph Sugie, Bernhard O. Palsson

مصطلحات موضوعية: Transcriptome, Regulon, Pseudomonas aeruginosa, medicine, Computational biology, Amino acid metabolism, Biology, medicine.disease_cause, Gene, Critical condition

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::655292c68c3837b9562899adde3fd395
https://doi.org/10.1101/2021.07.28.454220

المؤلفون: Elizabeth T, Montaño, Jason F, Nideffer, Joseph, Sugie, Eray, Enustun, Adam B, Shapiro, Hannah, Tsunemoto, Alan I, Derman, Kit, Pogliano, Joe, Pogliano

المصدر: J Bacteriol

مصطلحات موضوعية: DNA, Bacterial, Models, Molecular, Microbial Viability, Molecular Structure, Rhodanine, Protein Conformation, Gene Expression Regulation, Bacterial, Microbial Sensitivity Tests, Gene Expression Regulation, Enzymologic, Anti-Bacterial Agents, Drug Discovery, Escherichia coli, Nucleoside-Phosphate Kinase, Genome, Bacterial, Research Article

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::06db564b97dbc243db4a7dd3876e07a2
https://pubmed.ncbi.nlm.nih.gov/34280002

المؤلفون: Alan I. Derman, Joe Pogliano, Hannah Tsunemoto, Eray Enustun, Joseph Sugie, Kit Pogliano, Elizabeth T. Montaño, Jason F. Nideffer, Adam B. Shapiro

مصطلحات موضوعية: chemistry.chemical_classification, DNA synthesis, medicine.drug_class, Antibiotics, DNA replication, Thymidylate kinase, In vitro, Enzyme, chemistry, Biochemistry, Mechanism of action, In vivo, medicine, medicine.symptom

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::fe881f5f70fdee148d0003f4792c47d5
https://doi.org/10.1101/2021.02.22.432404

المؤلفون: Hannah Tsunemoto, Nicholas Dillon, Anne Lamsa, Adam M. Feist, Victor Nizet, Jonathan M. Monk, Joseph Sugie, Saugat Poudel, Rob Knight, Yara Seif, Joe Pogliano, Alison Vrbanac, Richard Szubin, Connor A. Olson, Pieter C. Dorrestein, Bernhard O. Palsson, Akanksha Rajput, Samira Dahesh, Michael J. Meehan

المصدر: GigaScience, vol 10, iss 1
Rajput, A, Poudel, S, Tsunemoto, H, Meehan, M, Szubin, R, Olson, C A, Seif, Y, Lamsa, A, Dillon, N, Vrbanac, A, Sugie, J, Dahesh, S, Monk, J M, Dorrestein, P C, Knight, R, Pogliano, J, Nizet, V, Feist, A M & Palsson, B O 2021, ' Identifying the effect of vancomycin on health care-associated methicillin-resistant Staphylococcus aureus strains using bacteriological and physiological media ', GigaScience, vol. 10, no. 1, giaa156 . https://doi.org/10.1093/gigascience/giaa156
GigaScience

مصطلحات موضوعية: Methicillin-Resistant Staphylococcus aureus, medicine.drug_class, AcademicSubjects/SCI02254, Antibiotics, Health Informatics, Microbial Sensitivity Tests, Biology, medicine.disease_cause, Data Note, Health care associated, Microbiology, 03 medical and health sciences, Vancomycin, medicine, Humans, 030304 developmental biology, Vancomycin resistance, 0303 health sciences, 030306 microbiology, Prevention, biochemical phenomena, metabolism, and nutrition, Staphylococcal Infections, Methicillin-resistant Staphylococcus aureus, Computer Science Applications, Emerging Infectious Diseases, Infectious Diseases, Staphylococcus aureus, AcademicSubjects/SCI00960, Antimicrobial Resistance, Infection, Delivery of Health Care, medicine.drug

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c17f7d88df6c641c22fb10d22940b67e
https://escholarship.org/uc/item/7fm6w9gt

المؤلفون: Saugat, Poudel, Hannah, Tsunemoto, Yara, Seif, Anand V, Sastry, Richard, Szubin, Sibei, Xu, Henrique, Machado, Connor A, Olson, Amitesh, Anand, Joe, Pogliano, Victor, Nizet, Bernhard O, Palsson

المصدر: Proceedings of the National Academy of Sciences of the United States of America

مصطلحات موضوعية: Staphylococcus aureus, Virulence, Sequence Analysis, RNA, Virulence Factors, Sigma Factor, Gene Expression Regulation, Bacterial, Staphylococcal Infections, Biological Sciences, Microbiology, DNA-Binding Proteins, Repressor Proteins, Bacterial Proteins, transcriptional regulatory network, Gene Regulatory Networks, Transcriptome, metabolism, Metabolic Networks and Pathways

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::3b9caf9a44c081eb249dd12774f9c826
https://pubmed.ncbi.nlm.nih.gov/32616573

المؤلفون: Kgs. Lyngby, Joe Pogliano, Nicholas Dillon, Henrique Machado, Hannah Tsunemoto, Yara Seif, Victor Nizet, Berhnard O. Palsson

المصدر: Access Microbiology. 2

مصطلحات موضوعية: Antibiotic resistance, Chemistry, General Materials Science, Microbiology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::b8d1dbf8112f2f458a0631b2d0f1c449
https://doi.org/10.1099/acmi.ac2020.po1011

المؤلفون: Akanksha Rajput, Saugat Poudel, Hannah Tsunemoto, Michael Meehan, Richard Szubin, Connor A. Olson, Yara Seif, Anne Lamsa, Nicholas Dillon, Alison Vrbanac, Joseph Sugie, Samira Dahesh, Jonathan M. Monk, Pieter C. Dorrestein, Rob Knight, Joe Pogliano, Victor Nizet, Adam M. Feist, Bernhard O. Palsson

مصطلحات موضوعية: Vancomycin resistance, 0303 health sciences, 030306 microbiology, medicine.drug_class, Antibiotics, Biology, medicine.disease_cause, 3. Good health, Microbiology, 03 medical and health sciences, Antibiotic resistance, Staphylococcus aureus, medicine, Vancomycin, 030304 developmental biology, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::549a8af0d027ff2a4678dc870c426419