المؤلفون: Sherry, NL, Horan, KA, Ballard, SA, Gonҫalves da Silva, A, Gorrie, CL, Schultz, MB, Stevens, K, Valcanis, M, Sait, ML, Stinear, TP, Howden, BP, Seemann, T

Relation: NHMRC/1196103; pii: 10.1038/s41467-022-35713-4; Sherry, N. L., Horan, K. A., Ballard, S. A., Gonҫalves da Silva, A., Gorrie, C. L., Schultz, M. B., Stevens, K., Valcanis, M., Sait, M. L., Stinear, T. P., Howden, B. P. & Seemann, T. (2023). An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance. Nat Commun, 14 (1), pp.60-. https://doi.org/10.1038/s41467-022-35713-4.; http://hdl.handle.net/11343/327250

الاتاحة: http://hdl.handle.net/11343/327250

المؤلفون: Higgs, C, Kumar, LS, Stevens, K, Strachan, J, Korman, T, Horan, K, Daniel, D, Russell, M, Mcdevitt, CA, Sherry, NL, Stinear, TP, Howden, BP, Gorrie, CL

المساهمون: Tamma, PD

Relation: NHMRC/1149991; NHMRC/1196103; Higgs, C., Kumar, L. S., Stevens, K., Strachan, J., Korman, T., Horan, K., Daniel, D., Russell, M., Mcdevitt, C. A., Sherry, N. L., Stinear, T. P., Howden, B. P. & Gorrie, C. L. (2023). Comparison of contemporary invasive and non-invasive Streptococcus pneumoniae isolates reveals new insights into circulating anti-microbial resistance determinants. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 67 (11), https://doi.org/10.1128/aac.00785-23.; http://hdl.handle.net/11343/339031

الاتاحة: http://hdl.handle.net/11343/339031

المؤلفون: Lacey, JA, Marcato, AJ, Chisholm, RH, Campbell, P, Zachreson, C, Price, DJ, James, TB, Morris, JM, Gorrie, CL, McDonald, M, Bowen, AC, Giffard, PM, Holt, DC, Currie, BJ, Carapetis, JR, Andrews, RM, Davies, MR, Geard, N, McVernon, J, Tong, SYC

Relation: NHMRC/1117140; NHMRC/1145033; pii: S2666-5247(23)00068-X; Lacey, J. A., Marcato, A. J., Chisholm, R. H., Campbell, P., Zachreson, C., Price, D. J., James, T. B., Morris, J. M., Gorrie, C. L., McDonald, M., Bowen, A. C., Giffard, P. M., Holt, D. C., Currie, B. J., Carapetis, J. R., Andrews, R. M., Davies, M. R., Geard, N., McVernon, J. & Tong, S. Y. C. (2023). Evaluating the role of asymptomatic throat carriage of Streptococcus pyogenes in impetigo transmission in remote Aboriginal communities in Northern Territory, Australia: a retrospective genomic analysis. LANCET MICROBE, 4 (7), pp.e524-e533. https://doi.org/10.1016/S2666-5247(23)00068-X.; http://hdl.handle.net/11343/332856

الاتاحة: http://hdl.handle.net/11343/332856

المؤلفون: Higgs, C, Kumar, LS, Stevens, K, Strachan, J, Sherry, NL, Horan, K, Zhang, J, Stinear, TP, Howden, BP, Gorrie, CL

Relation: NHMRC/1149991; Higgs, C., Kumar, L. S., Stevens, K., Strachan, J., Sherry, N. L., Horan, K., Zhang, J., Stinear, T. P., Howden, B. P. & Gorrie, C. L. (2023). Population structure, serotype distribution and antibiotic resistance of Streptococcus pneumoniae causing invasive disease in Victoria, Australia. MICROBIAL GENOMICS, 9 (7), https://doi.org/10.1099/mgen.0.001070.; http://hdl.handle.net/11343/338939

الاتاحة: http://hdl.handle.net/11343/338939

المؤلفون: Higgs, C, Sherry, NL, Seemann, T, Horan, K, Walpola, H, Kinsella, P, Bond, K, Williamson, DA, Marshall, C, Kwong, JC, Grayson, ML, Stinear, TP, Gorrie, CL, Howden, BP

Relation: NHMRC/1093468; NHMRC/1142613; NHMRC/1149991; NHMRC/1196103; pii: 10.1038/s41467-022-28156-4; Higgs, C., Sherry, N. L., Seemann, T., Horan, K., Walpola, H., Kinsella, P., Bond, K., Williamson, D. A., Marshall, C., Kwong, J. C., Grayson, M. L., Stinear, T. P., Gorrie, C. L. & Howden, B. P. (2022). Optimising genomic approaches for identifying vancomycin-resistant Enterococcus faecium transmission in healthcare settings. NATURE COMMUNICATIONS, 13 (1), https://doi.org/10.1038/s41467-022-28156-4.; http://hdl.handle.net/11343/301934

الاتاحة: http://hdl.handle.net/11343/301934

المؤلفون: Sherry, NL, Gorrie, CL, Kwong, JC, Higgs, C, Stuart, RL, Marshall, C, Ballard, SA, Sait, M, Korman, TM, Slavin, MA, Lee, RS, Graham, M, Leroi, M, Worth, LJ, Chan, HT, Seemann, T, Grayson, ML, Howden, BP

Relation: NHMRC/1105905; pii: S2666-6065(22)00061-X; Sherry, N. L., Gorrie, C. L., Kwong, J. C., Higgs, C., Stuart, R. L., Marshall, C., Ballard, S. A., Sait, M., Korman, T. M., Slavin, M. A., Lee, R. S., Graham, M., Leroi, M., Worth, L. J., Chan, H. T., Seemann, T., Grayson, M. L. & Howden, B. P. (2022). Multi-site implementation of whole genome sequencing for hospital infection control: A prospective genomic epidemiological analysis. LANCET REGIONAL HEALTH-WESTERN PACIFIC, 23, https://doi.org/10.1016/j.lanwpc.2022.100446.; http://hdl.handle.net/11343/306918

الاتاحة: http://hdl.handle.net/11343/306918

المؤلفون: Lung, TWF, Charytonowicz, D, Beaumont, KG, Shah, SS, Sridhar, SH, Gorrie, CL, Mu, A, Hofstaedter, CE, Varisco, D, McConville, TH, Drikic, M, Fowler, B, Urso, A, Shi, W, Fucich, D, Annavajhala, MK, Khan, IN, Oussenko, I, Francoeur, N, Smith, ML, Stockwell, BR, Lewis, IA, Hachani, A, Baskota, SU, Uhlemann, A-C, Ahn, D, Ernst, RK, Howden, BP, Sebra, R, Prince, A

Relation: NHMRC/1196103; pii: S1550-4131(22)00097-3; Lung, T. W. F., Charytonowicz, D., Beaumont, K. G., Shah, S. S., Sridhar, S. H., Gorrie, C. L., Mu, A., Hofstaedter, C. E., Varisco, D., McConville, T. H., Drikic, M., Fowler, B., Urso, A., Shi, W., Fucich, D., Annavajhala, M. K., Khan, I. N., Oussenko, I., Francoeur, N. ,. Prince, A. (2022). Klebsiella pneumoniae induces host metabolic stress that promotes tolerance to pulmonary infection. CELL METABOLISM, 34 (5), pp.761-+. https://doi.org/10.1016/j.cmet.2022.03.009.; http://hdl.handle.net/11343/308738

الاتاحة: http://hdl.handle.net/11343/308738

المؤلفون: Gorrie, CL, Mirceta, M, Wick, RR, Judd, LM, Lam, MMC, Gomi, R, Abbott, IJ, Thomson, NR, Strugnell, RA, Pratt, NF, Garlick, JS, Watson, KM, Hunter, PC, Pilcher, DV, McGloughlin, SA, Spelman, DW, Wyres, KL, Jenney, AWJ, Holt, KE

Relation: NHMRC/1061409; NHMRC/1043822; pii: 10.1038/s41467-022-30717-6; Gorrie, C. L., Mirceta, M., Wick, R. R., Judd, L. M., Lam, M. M. C., Gomi, R., Abbott, I. J., Thomson, N. R., Strugnell, R. A., Pratt, N. F., Garlick, J. S., Watson, K. M., Hunter, P. C., Pilcher, D. V., McGloughlin, S. A., Spelman, D. W., Wyres, K. L., Jenney, A. W. J. & Holt, K. E. (2022). Genomic dissection of Klebsiella pneumoniae infections in hospital patients reveals insights into an opportunistic pathogen. NATURE COMMUNICATIONS, 13 (1), https://doi.org/10.1038/s41467-022-30717-6.; http://hdl.handle.net/11343/316136

الاتاحة: http://hdl.handle.net/11343/316136

المؤلفون: Gorrie, CL, Da Silva, AG, Ingle, DJ, Higgs, C, Seemann, T, Stinear, TP, Williamson, DA, Kwong, JC, Grayson, ML, Sherry, NL, Howden, BP

Relation: NHMRC/1093468; NHMRC/1105905; NHMRC/1142613; NHMRC/1149991; pii: S2666-5247(21)00149-X; Gorrie, C. L., Da Silva, A. G., Ingle, D. J., Higgs, C., Seemann, T., Stinear, T. P., Williamson, D. A., Kwong, J. C., Grayson, M. L., Sherry, N. L. & Howden, B. P. (2021). Key parameters for genomics-based real-time detection and tracking of multidrug-resistant bacteria: a systematic analysis. LANCET MICROBE, 2 (11), pp.E575-E583. https://doi.org/10.1016/S2666-5247(21)00149-X.; http://hdl.handle.net/11343/283344

الاتاحة: http://hdl.handle.net/11343/283344

المؤلفون: Wyres, KL, Hawkey, J, Mirceta, M, Judd, LM, Wick, RR, Gorrie, CL, Pratt, NF, Garlick, JS, Watson, KM, Pilcher, DV, McGloughlin, SA, Abbott, IJ, Macesic, N, Spelman, DW, Jenney, AWJ, Holt, KE

Relation: NHMRC/1043822; pii: 10.1186/s12879-021-06386-z; Wyres, K. L., Hawkey, J., Mirceta, M., Judd, L. M., Wick, R. R., Gorrie, C. L., Pratt, N. F., Garlick, J. S., Watson, K. M., Pilcher, D. V., McGloughlin, S. A., Abbott, I. J., Macesic, N., Spelman, D. W., Jenney, A. W. J. & Holt, K. E. (2021). Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients. BMC INFECTIOUS DISEASES, 21 (1), https://doi.org/10.1186/s12879-021-06386-z.; http://hdl.handle.net/11343/287436

الاتاحة: http://hdl.handle.net/11343/287436

المؤلفون: Li, L, Higgs, C, Turner, AM, Nong, Y, Gorrie, CL, Sherry, NL, Dyet, KH, Seemann, T, Williamson, DA, Stinear, TP, Howden, BP, Carter, GP

Relation: NHMRC/1105905; NHMRC/1160745; NHMRC/1185213; Li, L., Higgs, C., Turner, A. M., Nong, Y., Gorrie, C. L., Sherry, N. L., Dyet, K. H., Seemann, T., Williamson, D. A., Stinear, T. P., Howden, B. P. & Carter, G. P. (2021). Daptomycin Resistance Occurs Predominantly in vanA-Type Vancomycin-Resistant Enterococcus faecium in Australasia and Is Associated With Heterogeneous and Novel Mutations. FRONTIERS IN MICROBIOLOGY, 12, https://doi.org/10.3389/fmicb.2021.749935.; http://hdl.handle.net/11343/296646

الاتاحة: http://hdl.handle.net/11343/296646

المؤلفون: Taiaroa, G, Matalavea, B, Tafuna'i, M, Lacey, JA, Price, DJ, Isaia, L, Leaupepe, H, Viali, S, Lee, D, Gorrie, CL, Williamson, DA, Jack, S

Relation: NHMRC/1123854; pii: S2666-6065(20)30081-X; Taiaroa, G., Matalavea, B., Tafuna'i, M., Lacey, J. A., Price, D. J., Isaia, L., Leaupepe, H., Viali, S., Lee, D., Gorrie, C. L., Williamson, D. A. & Jack, S. (2021). Scabies and impetigo in Samoa: A school-based clinical and molecular epidemiological study. LANCET REGIONAL HEALTH-WESTERN PACIFIC, 6, https://doi.org/10.1016/j.lanwpc.2020.100081.; http://hdl.handle.net/11343/280436

الاتاحة: http://hdl.handle.net/11343/280436

المؤلفون: Turner, AM, Lee, JYH, Gorrie, CL, Howden, BP, Carter, GP

Relation: NHMRC/1185213; NHMRC/1105905; Turner, A. M., Lee, J. Y. H., Gorrie, C. L., Howden, B. P. & Carter, G. P. (2021). Genomic Insights Into Last-Line Antimicrobial Resistance in Multidrug-Resistant Staphylococcus and Vancomycin-Resistant Enterococcus . FRONTIERS IN MICROBIOLOGY, 12, https://doi.org/10.3389/fmicb.2021.637656.; http://hdl.handle.net/11343/277956

الاتاحة: http://hdl.handle.net/11343/277956

المؤلفون: Tamma, PD, Higgs, C, Kumar, LS, Stevens, K, Strachan, J, Korman, T, Horan, K, Daniel, D, Russell, M, Mcdevitt, CA, Sherry, NL, Stinear, TP, Howden, BP, Gorrie, CL

مصطلحات الفهرس: Journal Article

URL: http://hdl.handle.net/11343/339031
NHMRC/1149991
NHMRC/1196103

المؤلفون: Williamson, DA, Chow, EPF, Gorrie, CL, Seemann, T, Ingle, DJ, Higgins, N, Easton, M, Taiaroa, G, Grad, YH, Kwong, JC, Fairley, CK, Chen, MY, Howden, BP

Relation: NHMRC/1105905; NHMRC/1123854; NHMRC/1142613; NHMRC/1149991; NHMRC/1147735; pii: 10.1038/s41467-019-12053-4; Williamson, D. A., Chow, E. P. F., Gorrie, C. L., Seemann, T., Ingle, D. J., Higgins, N., Easton, M., Taiaroa, G., Grad, Y. H., Kwong, J. C., Fairley, C. K., Chen, M. Y. & Howden, B. P. (2019). Bridging of Neisseria gonorrhoeae lineages across sexual networks in the HIV pre-exposure prophylaxis era. NATURE COMMUNICATIONS, 10 (1), https://doi.org/10.1038/s41467-019-12053-4.; http://hdl.handle.net/11343/250246

الاتاحة: http://hdl.handle.net/11343/250246

المؤلفون: Sherry, NL, Lane, CR, Kwong, JC, Schultz, M, Sait, M, Stevens, K, Ballard, S, da Silva, AG, Seemann, T, Gorrie, CL, Stinear, TP, Williamson, DA, Brett, J, van Diemen, A, Easton, M, Howden, BP

المساهمون: Diekema, DJ

Relation: NHMRC/1008549; NHMRC/1093468; NHMRC/1105905; NHMRC/1123854; NHMRC/1142613; NHMRC/1149991; pii: JCM.00573-19; Sherry, N. L., Lane, C. R., Kwong, J. C., Schultz, M., Sait, M., Stevens, K., Ballard, S., da Silva, A. G., Seemann, T., Gorrie, C. L., Stinear, T. P., Williamson, D. A., Brett, J., van Diemen, A., Easton, M. & Howden, B. P. (2019). Genomics for Molecular Epidemiology and Detecting Transmission of Carbapenemase-Producing Enterobacterales in Victoria, Australia, 2012 to 2016. JOURNAL OF CLINICAL MICROBIOLOGY, 57 (9), https://doi.org/10.1128/JCM.00573-19.; http://hdl.handle.net/11343/248387

الاتاحة: http://hdl.handle.net/11343/248387

المؤلفون: Gorrie, CL, Mirceta, M, Wick, RR, Judd, LM, Wyres, KL, Thomson, NR, Strugnell, RA, Pratt, NF, Garlick, JS, Watson, KM, Hunter, PC, McGloughlin, SA, Spelman, DW, Jenney, AWJ, Holt, KE

Relation: NHMRC/1061409; NHMRC/1043822; pii: 4798841; Gorrie, C. L., Mirceta, M., Wick, R. R., Judd, L. M., Wyres, K. L., Thomson, N. R., Strugnell, R. A., Pratt, N. F., Garlick, J. S., Watson, K. M., Hunter, P. C., McGloughlin, S. A., Spelman, D. W., Jenney, A. W. J. & Holt, K. E. (2018). Antimicrobial-Resistant Klebsiella pneumoniae Carriage and Infection in Specialized Geriatric Care Wards Linked to Acquisition in the Referring Hospital. CLINICAL INFECTIOUS DISEASES, 67 (2), pp.161-170. https://doi.org/10.1093/cid/ciy027.; http://hdl.handle.net/11343/270698

الاتاحة: http://hdl.handle.net/11343/270698

المؤلفون: Lam, MMC, Wick, RR, Wyres, KL, Gorrie, CL, Judd, LM, Jenney, AWJ, Brisse, S, Holt, KE

Relation: NHMRC/1061409; NHMRC/1043822; http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000445970000001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=d4d813f4571fa7d6246bdc0dfeca3a1c; ARTN 000196; Lam, M. M. C., Wick, R. R., Wyres, K. L., Gorrie, C. L., Judd, L. M., Jenney, A. W. J., Brisse, S. & Holt, K. E. (2018). Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations. MICROBIAL GENOMICS, 4 (9), https://doi.org/10.1099/mgen.0.000196.; http://hdl.handle.net/11343/222415

الاتاحة: http://hdl.handle.net/11343/222415
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000445970000001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=d4d813f4571fa7d6246bdc0dfeca3a1c

المؤلفون: Wick, RR, Judd, LM, Gorrie, CL, Holt, KE

المساهمون: Phillippy, AM

Relation: NHMRC/1043822; NHMRC/1061409; pii: PCOMPBIOL-D-17-00068; Wick, R. R., Judd, L. M., Gorrie, C. L. & Holt, K. E. (2017). Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads. PLOS COMPUTATIONAL BIOLOGY, 13 (6), https://doi.org/10.1371/journal.pcbi.1005595.; http://hdl.handle.net/11343/222417

الاتاحة: http://hdl.handle.net/11343/222417

المؤلفون: Wick, RR, Judd, LM, Gorrie, CL, Holt, KE

Relation: NHMRC/1061409; http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000431155600005&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=d4d813f4571fa7d6246bdc0dfeca3a1c; ARTN 000132; Wick, R. R., Judd, L. M., Gorrie, C. L. & Holt, K. E. (2017). Completing bacterial genome assemblies with multiplex MinION sequencing. MICROBIAL GENOMICS, 3 (10), https://doi.org/10.1099/mgen.0.000132.; http://hdl.handle.net/11343/222414

الاتاحة: http://hdl.handle.net/11343/222414
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000431155600005&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=d4d813f4571fa7d6246bdc0dfeca3a1c