المؤلفون: Yan, Tianyang, Palmer, Andrew B, Geiszler, Daniel J, Polasky, Daniel A, Boatner, Lisa M, Burton, Nikolas R, Armenta, Ernest, Nesvizhskii, Alexey I, Backus, Keriann M

المصدر: Analytical Chemistry. 94(9)

مصطلحات موضوعية: Alkynes, Azides, Catalysis, Click Chemistry, Copper, Cycloaddition Reaction, Cysteine, Humans, Tandem Mass Spectrometry, Analytical Chemistry, Other Chemical Sciences

URL الوصول: https://escholarship.org/uc/item/6k65721j

المؤلفون: Geiszler, Daniel J., Polasky, Daniel A., Yu, Fengchao, Nesvizhskii, Alexey I.

المساهمون: U.S. Department of Health & Human Services | National Institutes of Health

المصدر: Nature Communications ; volume 14, issue 1 ; ISSN 2041-1723

الاتاحة: http://dx.doi.org/10.1038/s41467-023-39828-0
https://www.nature.com/articles/s41467-023-39828-0.pdf
https://www.nature.com/articles/s41467-023-39828-0

المؤلفون: Polasky, Daniel A., Geiszler, Daniel J., Yu, Fengchao, Li, Kai, Teo, Guo Ci, Nesvizhskii, Alexey I.

المصدر: Molecular & Cellular Proteomics ; volume 22, issue 5, page 100538 ; ISSN 1535-9476

الاتاحة: http://dx.doi.org/10.1016/j.mcpro.2023.100538
https://api.elsevier.com/content/article/PII:S1535947623000488?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1535947623000488?httpAccept=text/plain

المؤلفون: Polasky, Daniel, Geiszler, Daniel, Yu, Fengchao, Nesvizhskii, Alexey

Relation: https://doi.org/10.5281/zenodo.5164997; https://doi.org/10.5281/zenodo.5834131; oai:zenodo.org:5834131

الاتاحة: https://doi.org/10.5281/zenodo.5834131

المؤلفون: Polasky, Daniel A., Geiszler, Daniel J., Yu, Fengchao, Nesvizhskii, Alexey I.

المساهمون: National Institutes of Health

المصدر: Molecular & Cellular Proteomics ; volume 21, issue 3, page 100205 ; ISSN 1535-9476

الاتاحة: http://dx.doi.org/10.1016/j.mcpro.2022.100205
https://api.elsevier.com/content/article/PII:S1535947622000135?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S1535947622000135?httpAccept=text/plain

المؤلفون: Polasky, Daniel, Geiszler, Daniel, Yu, Fengchao, Nesvizhskii, Alexey

Relation: https://doi.org/10.5281/zenodo.5164997; https://doi.org/10.5281/zenodo.5164998; oai:zenodo.org:5164998

الاتاحة: https://doi.org/10.5281/zenodo.5164998

المؤلفون: Polasky, Daniel, Geiszler, Daniel, Yu, Fengchao, Nesvizhskii, Alexey

Relation: https://doi.org/10.5281/zenodo.5164997; https://doi.org/10.5281/zenodo.5789424; oai:zenodo.org:5789424

الاتاحة: https://doi.org/10.5281/zenodo.5789424

المؤلفون: Geiszler, Daniel J., Kong, Andy T., Avtonomov, Dmitry M., Yu, Fengchao, Leprevost, Felipe da Veiga, Nesvizhskii, Alexey I.

المساهمون: National Institutes of Health

المصدر: Molecular & Cellular Proteomics ; volume 20, page 100018 ; ISSN 1535-9476

الاتاحة: http://dx.doi.org/10.1074/mcp.tir120.002216
https://api.elsevier.com/content/article/PII:S153594762035132X?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S153594762035132X?httpAccept=text/plain
https://syndication.highwire.org/content/doi/10.1074/mcp.TIR120.002216

المؤلفون: Clark, David J., Dhanasekaran, Saravana M., Petralia, Francesca, Pan, Jianbo, Song, Xiaoyu, Hu, Yingwei, da Veiga Leprevost, Felipe, Reva, Boris, Lih, Tung-Shing M., Chang, Hui-Yin, Ma, Weiping, Huang, Chen, Ricketts, Christopher J., Chen, Lijun, Krek, Azra, Li, Yize, Rykunov, Dmitry, Li, Qing Kay, Chen, Lin S., Ozbek, Umut, Vasaikar, Suhas, Wu, Yige, Yoo, Seungyeul, Chowdhury, Shrabanti, Wyczalkowski, Matthew A., Ji, Jiayi, Schnaubelt, Michael, Kong, Andy, Sethuraman, Sunantha, Avtonomov, Dmitry M., Ao, Minghui, Colaprico, Antonio, Cao, Song, Cho, Kyung-Cho, Kalayci, Selim, Ma, Shiyong, Liu, Wenke, Ruggles, Kelly, Calinawan, Anna, Gümüş, Zeynep H., Geiszler, Daniel, Kawaler, Emily, Teo, Guo Ci, Wen, Bo, Zhang, Yuping, Keegan, Sarah, Li, Kai, Chen, Feng, Edwards, Nathan, Pierorazio, Phillip M.

المصدر: Cell ; volume 180, issue 1, page 207 ; ISSN 0092-8674

الاتاحة: https://doi.org/10.1016/j.cell.2019.12.026
https://api.elsevier.com/content/article/PII:S0092867419313881?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867419313881?httpAccept=text/plain

المؤلفون: Geiszler, Daniel J, Polasky, Daniel A, Fengchao Yu, Nesvizhskii, Alexey I

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36639cfc45336015a45e1b388d7f28cc

المؤلفون: Clark, David J., Dhanasekaran, Saravana M., Petralia, Francesca, Pan, Jianbo, Song, Xiaoyu, Hu, Yingwei, da Veiga Leprevost, Felipe, Reva, Boris, Lih, Tung-Shing M., Chang, Hui-Yin, Ma, Weiping, Huang, Chen, Ricketts, Christopher J., Chen, Lijun, Krek, Azra, Li, Yize, Rykunov, Dmitry, Li, Qing Kay, Chen, Lin S., Ozbek, Umut, Vasaikar, Suhas, Wu, Yige, Yoo, Seungyeul, Chowdhury, Shrabanti, Wyczalkowski, Matthew A., Ji, Jiayi, Schnaubelt, Michael, Kong, Andy, Sethuraman, Sunantha, Avtonomov, Dmitry M., Ao, Minghui, Colaprico, Antonio, Cao, Song, Cho, Kyung-Cho, Kalayci, Selim, Ma, Shiyong, Liu, Wenke, Ruggles, Kelly, Calinawan, Anna, Gümüş, Zeynep H., Geiszler, Daniel, Kawaler, Emily, Teo, Guo Ci, Wen, Bo, Zhang, Yuping, Keegan, Sarah, Li, Kai, Chen, Feng, Edwards, Nathan, Pierorazio, Phillip M.

المساهمون: NIH, National Cancer Institute’s, Clinical Proteomic Tumor Analysis Consortium

المصدر: Cell ; volume 179, issue 4, page 964-983.e31 ; ISSN 0092-8674

الاتاحة: http://dx.doi.org/10.1016/j.cell.2019.10.007
https://api.elsevier.com/content/article/PII:S0092867419311237?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867419311237?httpAccept=text/plain

المؤلفون: Burton, Nikolas R., Polasky, Daniel A., Shikwana, Flowreen, Ofori, Samuel, Yan, Tianyang, Geiszler, Daniel J., Veiga Leprevost, Felipe da, Nesvizhskii, Alexey I., Backus, Keriann M.

المساهمون: National Cancer Institute, Defense Advanced Research Projects Agency, Arnold and Mabel Beckman Foundation, Tobacco-Related Disease Research Program

المصدر: Journal of the American Chemical Society ; volume 145, issue 39, page 21303-21318 ; ISSN 0002-7863 1520-5126

الاتاحة: http://dx.doi.org/10.1021/jacs.3c05797
https://pubs.acs.org/doi/pdf/10.1021/jacs.3c05797

المؤلفون: Ozlu, Nurhan, Geiszler, Daniel J.

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::ad8f20cd8a28117619248df91772c6ce

المؤلفون: Burton, Nikolas, Polasky, Daniel, Shikwanna, Flowreen, Ofori, Samuel, Yan, Tianyang, Geiszler, Daniel, da Veiga Leprevost, Felipe, Nesvizhskii, Alexey, Backus, Keriann

المساهمون: Arnold and Mabel Beckman Foundation, National Cancer Institute, National Institutes of Health

الاتاحة: http://dx.doi.org/10.26434/chemrxiv-2023-n8h29
https://chemrxiv.org/engage/api-gateway/chemrxiv/assets/orp/resource/item/63f9522232cd591f126f3f6b/original/a-solid-phase-compatible-silane-based-cleavable-linker-enables-custom-isobaric-quantitative-chemoproteomics.pdf

المؤلفون: Burton, Nikolas, Polasky, Daniel, Shikwanna, Flowreen, Ofori, Samuel, Yan, Tianyang, Geiszler, Daniel, da Veiga Leprevost, Felipe, Nesvizhskii, Alexey, Backus, Keriann

المساهمون: Arnold and Mabel Beckman Foundation, National Cancer Institute, National Institutes of Health

الاتاحة: http://dx.doi.org/10.26434/chemrxiv-2023-n8h29-v3
https://chemrxiv.org/engage/api-gateway/chemrxiv/assets/orp/resource/item/6413cbe72bfb3dc251e54ae2/original/enhancing-multiplexed-cysteine-chemoproteomics-by-uniting-frag-pipe-with-solid-phase-compatible-dialkoxydiphenylsilane-reagents.pdf

المؤلفون: Polasky, Daniel, Geiszler, Daniel, Yu, Fengchao, Li, Kai, Teo, Guo Ci, Nesvizhskii, Alexey

Relation: https://doi.org/10.5281/zenodo.7186867; https://doi.org/10.5281/zenodo.7186868; oai:zenodo.org:7186868

الاتاحة: https://doi.org/10.5281/zenodo.7186868

المؤلفون: Geiszler, Daniel J., Kong, Andy T., Avtonomov, Dmitry M., Yu, Fengchao, Leprevost, Felipe V., Nesvizhskii, Alexey I.

المصدر: Molecular & Cellular Proteomics : MCP

مصطلحات موضوعية: False discovery rate, Proteomics, RT, retention time, Computer science, Cell, EGS, ethylene glycolbis(succinimidylsuccinate), PTMs, post-translational modifications, Tandem mass tag, Tandem mass spectrometry, Biochemistry, Analytical Chemistry, open search, chemistry.chemical_compound, Mice, Open searching, PTM, Post-translational modification, Mass-tolerant search, Localization, Spectral similarity, Retention time, SS, spectral similarity, Peptide synthesis, Databases, Protein, chemistry.chemical_classification, Technological Innovation and Resources, SNR, signal-to-noise remainder, LUAD, lung adenocarcinoma, PSM, peptide-spectrum match, Amino acid, medicine.anatomical_structure, UCEC, uterine corpus endometrial carcinoma, Data analysis, PNNL, Pacific Northwest National Laboratory, FDR, false discovery rate, PTM, CCRCC, clear cell renal cell carcinoma, Computational biology, FFPE, formalin-fixed and paraffin-embedded, JHU, Johns Hopkins University, medicine, Animals, Humans, Shotgun proteomics, Molecular Biology, BI, Broad Institute, TMT, tandem mass tag, Automatic summarization, CAA, chloroacetamide, CPTAC, Clinical Proteomics Tumor Analysis Consortium, QC, quality control, Post translational, chemistry, MS, mass spectrometry, Peptides, IAA, iodoacetamide, Retention time, Protein Processing, Post-Translational, Cysteine

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::adaab954dae3eb538974a83cbaf67519
https://pubmed.ncbi.nlm.nih.gov/33568339

المؤلفون: Yan, Tianyang, Palmer, Andrew, Geiszler, Daniel, Polansky, Dan, Armenta, Ernest, Nesvizhskii, Alexey, Backus, Keriann

المساهمون: Arnold and Mabel Beckman Foundation, V Foundation for Cancer Research, Jonsson Comprehensive Cancer Center, Tobacco-Related Disease Research Program, National Institute of General Medical Sciences, National Cancer Institute

الاتاحة: http://dx.doi.org/10.33774/chemrxiv-2021-4b291
https://chemrxiv.org/engage/api-gateway/chemrxiv/assets/orp/resource/item/616252a235b406642b0ebbf2/original/enhancing-cysteine-chemoproteomic-coverage-through-systematic-assessment-of-click-chemistry-product-fragmentation.pdf

المؤلفون: Yu, Fengchao, Teo, Guo Ci, Kong, Andy T., Haynes, Sarah E., Avtonomov, Dmitry M., Geiszler, Daniel J., Nesvizhskii, Alexey I.

المصدر: Nature Communications; 8/13/2020, Vol. 11 Issue 1, p1-9, 9p

مصطلحات موضوعية: PEPTIDES, DAUGHTER ions, POST-translational modification, PROTEOMICS, SEARCH engines, MEDLINE, IDENTIFICATION

المؤلفون: Geiszler, Daniel

المساهمون: Nesvizhskii, Alexey, Hakansson, Kristina I, Karnovsky, Alla, Mills, Ryan Edward, Rao, Arvind

مصطلحات موضوعية: bioinformatics, proteomics, mass spectrometry, post-translational modifications, computational biology, Computer Science, Molecular, Cellular and Developmental Biology, Chemistry, Science (General), Engineering, Health Sciences, Science

وصف الملف: application/pdf

Relation: https://hdl.handle.net/2027.42/174422; https://dx.doi.org/10.7302/6153; orcid:0000-0002-7691-8534; Geiszler, Daniel; 0000-0002-7691-8534

الاتاحة: https://hdl.handle.net/2027.42/174422
https://doi.org/10.7302/6153