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1Academic Journal
المؤلفون: Théophile Niault, Ariel Talavera, Eric Le Cam, Sonia Baconnais, Ole Skovgaard, Florian Fournes, Léa Wagner, Hedvig Tamman, Andrew Thompson, Dannele Echemendia-Blanco, Noa Guzzi, Abel Garcia-Pino, Didier Mazel, Marie-Eve Val
المصدر: Nature Communications, Vol 16, Iss 1, Pp 1-16 (2025)
مصطلحات موضوعية: Science
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2041-1723
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2Academic Journal
المؤلفون: Florian Fournes, Marie-Eve Val, Ole Skovgaard, Didier Mazel
المصدر: Frontiers in Microbiology, Vol 9 (2018)
مصطلحات موضوعية: megaplasmids, chromids, repABC, iterons, replication initiation, Microbiology, QR1-502
وصف الملف: electronic resource
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المؤلفون: Egill Richard, Baptiste Darracq, Eloi Littner, Claire Vit, Clémence Whiteway, Julia Bos, Florian Fournes, Geneviève Garriss, Valentin Conte, Delphine Lapaillerie, Vincent Parissi, François Rousset, Ole Skovgaard, David Bikard, Eduardo P. C. Rocha, Didier Mazel, Céline Loot
المساهمون: Plasticité du Génome Bactérien - Bacterial Genome Plasticity (PGB), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Ecole Doctorale Complexité du Vivant (ED515), Sorbonne Université (SU), Génomique évolutive des Microbes / Microbial Evolutionary Genomics, Direction générale de l'Armement (DGA), Microbiologie Fondamentale et Pathogénicité (MFP), Université Bordeaux Segalen - Bordeaux 2-Centre National de la Recherche Scientifique (CNRS), Viral DNA Integration and Chromatin Dynamics Network (DyNAVir), Université Bordeaux Segalen - Bordeaux 2-Centre National de la Recherche Scientifique (CNRS)-Université Bordeaux Segalen - Bordeaux 2-Centre National de la Recherche Scientifique (CNRS), Biologie de Synthèse - Synthetic biology, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Department of Science, Systems and Models, Roskilde Universitet [Roskilde], This work was supported by the Institut Pasteur, the Centre National de la Recherche Scientifique (CNRS-UMR 3525), the Fondation pour la Recherche Médicale (FRM Grant No. EQU202103012569), the ANR Chromintevol (ANR-21-CE12-0002-01), the French Government’s Investissement d’Avenir program Laboratoire d’Excellence ‘Integrative Biology of Emerging Infectious Diseases’ [ANR-10-LABX-62-IBEID], the Ministère de l’Enseignement Supérieur et de la Recherche and the Direction Générale de l’Armement (DGA), We thank Jun Teramoto and Akihiko Kondo for sharing their construct for base-editing. We thank Marc Monot, Laurence Ma, Juliana Pipoli Da Fonseca and Thomas Cocklaer from the Biomics platform, C2RT, Institut Pasteur, Paris, France, ANR-21-CE12-0002,Chromintevol,Etude de l'impact des intégrons chromosiques sur l'évolution des bactéries(2021), ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010)
مصطلحات موضوعية: sitespecific recombination, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, mobile elements, genetic stability, bacterial evolution and plasticity, genome organization, [SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology, toxin-antitoxin cassettes, sedentary chromosomal integron
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المؤلفون: Claire Vit, Xavier Eyer, Vincent Parissi, Florian Fournes, Egill Richard, Didier Mazel, Clemence Whiteway, Céline Loot, Delphine Lapaillerie
المساهمون: Plasticité du Génome Bactérien - Bacterial Genome Plasticity (PGB), Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), École Doctorale Bio Sorbonne Paris Cité [Paris] (ED BioSPC), Université Sorbonne Paris Cité (USPC)-Université de Paris (UP), Institut de Cancérologie Strasbourg (ICANS), Vrije Universiteit Brussel (VUB), Hôpital Lariboisière-Fernand-Widal [APHP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Microbiologie cellulaire et moléculaire et pathogénicité (MCMP), Université Bordeaux Segalen - Bordeaux 2-Centre National de la Recherche Scientifique (CNRS), This work was supported by the French Government’s Investissement d’Avenir program Laboratoire d’Excellence ‘Integrative Biology of Emerging Infectious Diseases’ [ANR-10-LABX-62- IBEID] and ‘Fondation pour la Recherche Médicale’, ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), Faculty of Sciences and Bioengineering Sciences, Department of Bio-engineering Sciences, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), École Doctorale Bio Sorbonne Paris Cité [Paris] (ED562 - BioSPC), Université Sorbonne Paris Cité (USPC)-Université Paris Cité (UPCité), Microbiologie Fondamentale et Pathogénicité (MFP), Institut Pasteur, Centre National de la Recherche Scientifique, the French Government’s Investissement d’Avenir program Laboratoire d’Excellence Integrative Biology of Emerging Infectious Diseases [ANR-10-LABX-62- IBEID], Fondation pour la Recherche Médicale and Ecole Doctorale Complexité du Vivant. Funding for open access charge: Institut Pasteur, We would like to thank Evelyne Krin for providing the N16961 recA mutant and Sandra Arroyo-Beck and Marcos Manero for their experimental help. We also thank Jason Bland for helpful reading of the manuscript and all the lab members for helpful discussion., Author contributions: C.L., D.M. and V.P. designed the research. C.L., C.V., E.R., F.F., C.W., X.E. and D.L. performed the experiments. C.L. and C.V. wrote the draft of the manuscript. All authors read, amended the manuscript, and approved its final version.
المصدر: Nucleic Acids Research
Nucleic Acids Research, 2021, 49 (10), pp.5654-5670. ⟨10.1093/nar/gkab412⟩مصطلحات موضوعية: MESH: Integrases, AcademicSubjects/SCI00010, [SDV]Life Sciences [q-bio], Genome Integrity, Repair and Replication, Integron, medicine.disease_cause, Integrons/genetics, Integrons, Plasmid, SOS response, Vibrio cholerae, Recombination, Genetic, Genetics, MESH: Gene Expression Regulation, Bacterial, 0303 health sciences, Rec A Recombinases/genetics, biology, MESH: Escherichia coli, [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE], Recombination, Genetic/genetics, MESH: Integrons, Integrase, MESH: Rec A Recombinases, Adaptive selection, MESH: Recombination, Genetic, Gene Transfer, Horizontal, Integrases/genetics, Chromosomes, 03 medical and health sciences, Vibrio cholerae/genetics, Escherichia coli, medicine, 030304 developmental biology, Integrases, 030306 microbiology, Chromosomes/genetics, Gene Transfer, Horizontal/genetics, Gene Expression Regulation, Bacterial, Gene Expression Regulation, Bacterial/genetics, biochemical phenomena, metabolism, and nutrition, bacterial infections and mycoses, biology.organism_classification, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, MESH: Gene Transfer, Horizontal, Rec A Recombinases, Transformation (genetics), Escherichia coli/metabolism, biology.protein, bacteria, MESH: Chromosomes, MESH: Vibrio cholerae, Bacteria
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المؤلفون: Maria-Vittoria Mazzuoli, Marie-Eve Val, Florian Fournes, Francisco de Lemos Martins, Didier Mazel
المساهمون: Plasticité du Génome Bactérien - Bacterial Genome Plasticity (PGB), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Research was funded by the Institut Pasteur, the Institut National de la Santé et de la Recherche Médicale (INSERM) and the Centre National de la Recherche Scientifique [CNRS-UMR 3525], French Government's Investissement d’Avenir program, Laboratoire d’Excellence ‘Integrative Biology of Emerging Infectious Diseases’ [ANR-10-LABX-62-IBEID], French National Research Agency [ANR-14-CE10-0007], Pasteur-Paris University (PPU) International PhD Program (to F.dL.M.). Funding for open access charge: French National Research Agency [ANR-14-CE10-0007]., ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), ANR-14-CE10-0007,MAGISBAC,Génèse et maintenance des chromosomes secondaire bactériens(2014), Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)
المصدر: Nucleic Acids Research
Nucleic Acids Research, 2018, 46 (19), pp.10145-10156. ⟨10.1093/nar/gky790⟩
Nucleic Acids Research, Oxford University Press, 2018, 46 (19), pp.10145-10156. ⟨10.1093/nar/gky790⟩مصطلحات موضوعية: 0301 basic medicine, MESH: DNA, Bacterial / genetics, Plasma protein binding, Genome Integrity, Repair and Replication, MESH: Base Sequence, chemistry.chemical_compound, Plasmid, MESH: DNA Methylation, Vibrio cholerae, Regulation of gene expression, Genetics, MESH: Bacterial Proteins / genetics, MESH: Gene Expression Regulation, Bacterial, MESH: Molecular Chaperones / genetics, MESH: Chromosomes, Bacterial / genetics, MESH: Molecular Chaperones / metabolism, Chromosomes, Bacterial, MESH: Vibrio cholerae / genetics, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, DNA methylation, MESH: Replication Origin, MESH: DNA Copy Number Variations, MESH: DNA, Bacterial / metabolism, Plasmids, Protein Binding, DNA Replication, DNA, Bacterial, MESH: Genome, Bacterial / genetics, DNA Copy Number Variations, MESH: DNA Replication, Replication Origin, Biology, 03 medical and health sciences, Bacterial Proteins, MESH: Protein Binding, MESH: Bacterial Proteins / metabolism, [SDV.GEN]Life Sciences [q-bio]/Genetics, Base Sequence, fungi, DNA replication, Chromosome, MESH: Plasmids / genetics, Gene Expression Regulation, Bacterial, DNA Methylation, biology.organism_classification, Vibrio, 030104 developmental biology, chemistry, nervous system, Genome, Bacterial, DNA, Molecular Chaperones
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المؤلفون: Peter L. Graumann, Dhruba K. Chattoraj, Druckerei Stückle, Zoya M. Petrushenko, Ramon A van der Valk, Philippe Rousseau, Andrew Travers, François Cornet, Stephen D. Bell, Viridiana Herrera, Jocelyne Vreede, Charles J. Dorman, Jörg Soppa, Georgi Muskhelishvili, Sonja Julia Messerschmidt, Valentin V. Rybenkov, Luise A.K. Kleine Borgmann, Estelle Crozat, Satz Mengensatzproduktion, Rachel Y. Samson, Remus T. Dame, Florian Fournes, Jyoti K. Jha, Hang Zhao, Revathy Ramachandran, Frédéric Crémazy, Torsten Waldminghaus
المصدر: Journal of Molecular Microbiology and Biotechnology. 24:I-IV
مصطلحات موضوعية: Molecular Biology, Applied Microbiology and Biotechnology, Microbiology, Biotechnology
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المؤلفون: Estelles Crozat, Catherine Tardin, Laurence Salomé, François Cornet, Carine Pages, Florian Fournes, Philippe Rousseau
المصدر: Proceedings of the National Academy of Sciences of the United States of America. 113(28)
مصطلحات موضوعية: 0301 basic medicine, Genetics, Recombination, Genetic, Multidisciplinary, Chromosomal translocation, Biology, Neisseria gonorrhoeae, Chromosome segregation, Recombinases, 03 medical and health sciences, chemistry.chemical_compound, 030104 developmental biology, chemistry, Bacterial Proteins, Genomic island, Commentaries, biology.protein, Recombinase, Translocase, Mobile genetic elements, Recombination, DNA
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المصدر: Microbiology Spectrum. 2
مصطلحات موضوعية: Microbiology (medical), Cell division, Physiology, Biology, Chromosomes, Recombinases, Serine, Plasmid, Genetics, Crossing Over, Genetic, Replicon, Homologous Recombination, chemistry.chemical_classification, General Immunology and Microbiology, Ecology, Resolution (electron density), Cell Biology, 3. Good health, Infectious Diseases, Enzyme, chemistry, DNA, Circular, Homologous recombination, Recombination, Plasmids
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المساهمون: Laboratoire de microbiologie et génétique moléculaires (LMGM), Centre de Biologie Intégrative (CBI), Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
المصدر: Plasmid biology
Plasmid biology, pp.251-273, 2014مصطلحات موضوعية: 0303 health sciences, 03 medical and health sciences, 030306 microbiology, [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS, 030304 developmental biology
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