المؤلفون: Sahel, Yair Ben, Bryan, John P., Cleary, Brian, Farhi, Samouil L., Eldar, Yonina C.

مصطلحات موضوعية: Computer Science - Computer Vision and Pattern Recognition, Computer Science - Information Theory, Computer Science - Machine Learning, Electrical Engineering and Systems Science - Signal Processing

URL الوصول: http://arxiv.org/abs/2109.14025

المؤلفون: Schapiro, Denis, Yapp, Clarence, Sokolov, Artem, Reynolds, Sheila M., Chen, Yu-An, Sudar, Damir, Xie, Yubin, Muhlich, Jeremy L., Arias-Camison, Raquel, Arena, Sarah, Taylor, Adam J., Nikolov, Milen, Tyler, Madison, Lin, Jia-Ren, Burlingame, Erik A., Network, Human Tumor Atlas, Chang, Young H., Farhi, Samouil L, Thorsson, Vésteinn, Venkatamohan, Nithya, Drewes, Julia L., Pe'er, Dana, Gutman, David A., Herrmann, Markus D., Gehlenborg, Nils, Bankhead, Peter, Roland, Joseph T., Herndon, John M., Snyder, Michael P., Angelo, Michael, Nolan, Garry, Swedlow, Jason R., Schultz, Nikolaus, Merrick, Daniel T., Mazzilli, Sarah A., Cerami, Ethan, Rodig, Scott J., Santagata, Sandro, Sorger, Peter K.

مصطلحات موضوعية: Quantitative Biology - Other Quantitative Biology, Electrical Engineering and Systems Science - Image and Video Processing

URL الوصول: http://arxiv.org/abs/2108.09499

المؤلفون: Park, Cameron Y, Maurer, Katie, Jin, Yinuo, Zhang, Jia Yi, Krishna, Sachi, Abbondanza, Domenic, Mangum, Chanell, Farhi, Samouil L, Wu, Catherine J, Azizi, Elham

المصدر: Regular and Young Investigator Award Abstracts ; page A1374-A1375

الاتاحة: https://doi.org/10.1136/jitc-2024-sitc2024.1232
https://syndication.highwire.org/content/doi/10.1136/jitc-2024-SITC2024.1232

المؤلفون: Wang, Brice, Ma, Tianle, Chen, Theresa, Nguyen, Trinh, Crouse, Ethan, Fleming, Stephen J., Walker, Alison S., Valakh, Vera, Nehme, Ralda, Miller, Evan W., Farhi, Samouil L., Babadi, Mehrtash

المساهمون: National Institute of Mental Health, BroadIgnite, Broad Institute, Stanley Center for Psychiatric Research, Broad Institute, National Institutes of Health, Simons Foundation Autism Research Initiative

المصدر: npj Imaging ; volume 2, issue 1 ; ISSN 2948-197X

الاتاحة: https://doi.org/10.1038/s44303-024-00055-x
https://www.nature.com/articles/s44303-024-00055-x.pdf
https://www.nature.com/articles/s44303-024-00055-x

المؤلفون: Pietiläinen, Olli, Trehan, Aditi, Meyer, Daniel, Mitchell, Jana, Tegtmeyer, Matthew, Valakh, Vera, Gebre, Hilena, Chen, Theresa, Vartiainen, Emilia, Farhi, Samouil L., Eggan, Kevin, McCarroll, Steven A., Nehme, Ralda

المساهمون: Neuroscience Center, Helsinki Institute of Life Science HiLIFE

مصطلحات موضوعية: Glial-cells, Functional-neurons, Rna-seq, Package, Specializations, Differentiation, Bioconductor, System, Family, Roles, Biochemistry, cell and molecular biology

وصف الملف: application/pdf

Relation: Pietiläinen , O , Trehan , A , Meyer , D , Mitchell , J , Tegtmeyer , M , Valakh , V , Gebre , H , Chen , T , Vartiainen , E , Farhi , S L , Eggan , K , McCarroll , S A & Nehme , R 2023 , ' Astrocytic cell adhesion genes linked to schizophrenia correlate with synaptic programs in neurons ' , Cell Reports , vol. 42 , no. 1 , 111988 . https://doi.org/10.1016/j.celrep.2022.111988; ORCID: /0000-0003-4387-1861/work/158617359; http://hdl.handle.net/10138/356984; f6e53c62-72c6-45cf-a185-621892b9d8e8; 000950991900001

الاتاحة: http://hdl.handle.net/10138/356984

المؤلفون: Schapiro, Denis, Sokolov, Artem, Yapp, Clarence, Chen, Yu-An, Muhlich, Jeremy L, Hess, Joshua, Creason, Allison L, Nirmal, Ajit J, Baker, Gregory J, Nariya, Maulik K, Lin, Jia-Ren, Maliga, Zoltan, Jacobson, Connor A, Hodgman, Matthew W, Ruokonen, Juha, Farhi, Samouil L, Abbondanza, Domenic, McKinley, Eliot T, Persson, Daniel, Betts, Courtney, Sivagnanam, Shamilene, Regev, Aviv, Goecks, Jeremy, Coffey, Robert J, Coussens, Lisa M, Santagata, Sandro, Sorger, Peter K

المساهمون: Massachusetts Institute of Technology. Department of Biology

المصدر: Nature

وصف الملف: application/pdf

Relation: Nature Methods; https://hdl.handle.net/1721.1/147096; Schapiro, Denis, Sokolov, Artem, Yapp, Clarence, Chen, Yu-An, Muhlich, Jeremy L et al. 2022. "MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging." Nature Methods, 19 (3).

الاتاحة: https://hdl.handle.net/1721.1/147096

المؤلفون: Bryan, John P, Binan, Loïc, McCann, Cai, Eldar, Yonina C, Farhi, Samouil L, Cleary, Brian

المساهمون: Peng, Hanchuan, National Institutes of Mental Health, Broad Institute and the Israel Science Foundation

المصدر: Bioinformatics ; volume 39, issue 6 ; ISSN 1367-4811

الاتاحة: https://doi.org/10.1093/bioinformatics/btad362
https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad362/50513505/btad362.pdf
https://academic.oup.com/bioinformatics/article-pdf/39/6/btad362/50683421/btad362.pdf

المؤلفون: Berryer, Martin H., Tegtmeyer, Matthew, Binan, Loïc, Valakh, Vera, Nathanson, Anna, Trendafilova, Darina, Crouse, Ethan, Klein, Jenny A., Meyer, Daniel, Pietiläinen, Olli, Rapino, Francesca, Farhi, Samouil L., Rubin, Lee L., McCarroll, Steven A., Nehme, Ralda, Barrett, Lindy E.

المساهمون: National Institutes of Health, Broad Institute

المصدر: iScience ; volume 26, issue 7, page 106995 ; ISSN 2589-0042

الاتاحة: https://doi.org/10.1016/j.isci.2023.106995
https://api.elsevier.com/content/article/PII:S2589004223010726?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2589004223010726?httpAccept=text/plain

المؤلفون: Krishnamoorthy, Lakshmi, Cotruvo, Joseph A, Chan, Jefferson, Kaluarachchi, Harini, Muchenditsi, Abigael, Pendyala, Venkata S, Jia, Shang, Aron, Allegra T, Ackerman, Cheri M, Wal, Mark N Vander, Guan, Timothy, Smaga, Lukas P, Farhi, Samouil L, New, Elizabeth J, Lutsenko, Svetlana, Chang, Christopher J

المصدر: Nature Chemical Biology. 12(8)

مصطلحات موضوعية: Biochemistry and Cell Biology, Biological Sciences, 3T3-L1 Cells, Animals, Copper, Cyclic AMP, Cyclic Nucleotide Phosphodiesterases, Type 3, Dose-Response Relationship, Drug, Lipolysis, Mice, Molecular Structure, Phosphodiesterase 3 Inhibitors, Structure-Activity Relationship, Medicinal and Biomolecular Chemistry, Biochemistry & Molecular Biology, Biochemistry and cell biology, Medicinal and biomolecular chemistry

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4p44070v

المؤلفون: Schapiro, Denis, Yapp, Clarence, Sokolov, Artem, Reynolds, Sheila M., Chen, Yu-An, Sudar, Damir, Xie, Yubin, Muhlich, Jeremy, Arias-Camison, Raquel, Arena, Sarah, Taylor, Adam J., Nikolov, Milen, Tyler, Madison, Lin, Jia-Ren, Burlingame, Erik A., Chang, Young H., Farhi, Samouil L., Thorsson, Vésteinn, Venkatamohan, Nithya, Drewes, Julia L., Pe'er, Dana, Gutman, David A., Herrmann, Markus D., Gehlenborg, Nils, Bankhead, Peter, Roland, Joseph T., Herndon, John M, Snyder, Michael P, Angelo, Michael, Nolan, Garry, Swedlow, Jason R., Schultz, Nikolaus, Merrick, Daniel T., Mazzili, Sarah A., Cerami, Ethan, Rodig, Scott J., Santagata, Sandro, Sorger, Peter K.

المصدر: Schapiro , D , Yapp , C , Sokolov , A , Reynolds , S M , Chen , Y-A , Sudar , D , Xie , Y , Muhlich , J , Arias-Camison , R , Arena , S , Taylor , A J , Nikolov , M , Tyler , M , Lin , J-R , Burlingame , E A , Chang , Y H , Farhi , S L , Thorsson , V , Venkatamohan , N , Drewes , J L , Pe'er , D , Gutman , D A , Herrmann , M D ....

مصطلحات موضوعية: Data publication and archiving, Databases, Image processing, Standards, /dk/atira/pure/subjectarea/asjc/1300/1312, name=Molecular Biology, /dk/atira/pure/subjectarea/asjc/1300/1303, name=Biochemistry, /dk/atira/pure/subjectarea/asjc/1300/1305, name=Biotechnology, /dk/atira/pure/subjectarea/asjc/1300/1307, name=Cell Biology

وصف الملف: application/pdf

الاتاحة: https://discovery.dundee.ac.uk/en/publications/ffde6e1b-13c5-4748-8e2b-a50f0a61b174
https://doi.org/10.1038/s41592-022-01415-4
https://discovery.dundee.ac.uk/ws/files/73028526/2108.09499.pdf
https://arxiv.org/abs/2108.09499v2
http://www.scopus.com/inward/record.url?scp=85126388877&partnerID=8YFLogxK

المؤلفون: Schapiro, Denis, Sokolov, Artem, Yapp, Clarence, Chen, Yu-An, Muhlich, Jeremy L., Hess, Joshua, Creason, Allison L., Nirmal, Ajit J., Baker, Gregory J., Nariya, Maulik K., Lin, Jia-Ren, Maliga, Zoltan, Jacobson, Connor A., Hodgman, Matthew W., Ruokonen, Juha, Farhi, Samouil L., Abbondanza, Domenic, McKinley, Eliot T., Persson, Daniel, Betts, Courtney, Sivagnanam, Shamilene, Regev, Aviv, Goecks, Jeremy, Coffey, Robert J., Coussens, Lisa M., Santagata, Sandro, Sorger, Peter K.

المساهمون: U.S. Department of Health & Human Services | NIH | National Cancer Institute, Ludwig Institute for Cancer Research, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, Damon Runyon Cancer Research Foundation

المصدر: Nature Methods ; volume 19, issue 3, page 311-315 ; ISSN 1548-7091 1548-7105

الاتاحة: http://dx.doi.org/10.1038/s41592-021-01308-y
https://www.nature.com/articles/s41592-021-01308-y.pdf
https://www.nature.com/articles/s41592-021-01308-y

المؤلفون: Favuzzi, Emilia, Huang, Shuhan, Saldi, Giuseppe A., Binan, Loïc, Ibrahim, Leena A., Fernández-Otero, Marian, Cao, Yuqing, Zeine, Ayman, Sefah, Adwoa, Zheng, Karen, Xu, Qing, Khlestova, Elizaveta, Farhi, Samouil L., Bonneau, Richard, Datta, Sandeep Robert, Stevens, Beth, Fishell, Gord

المصدر: Cell ; volume 184, issue 15, page 4048-4063.e32 ; ISSN 0092-8674

الاتاحة: http://dx.doi.org/10.1016/j.cell.2021.06.018
https://api.elsevier.com/content/article/PII:S0092867421007534?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867421007534?httpAccept=text/plain

المؤلفون: Massachusetts Institute of Technology. Department of Biology, Schapiro, Denis, Sokolov, Artem, Yapp, Clarence, Chen, Yu-An, Muhlich, Jeremy L, Hess, Joshua, Creason, Allison L, Nirmal, Ajit J, Baker, Gregory J, Nariya, Maulik K, Lin, Jia-Ren, Maliga, Zoltan, Jacobson, Connor A, Hodgman, Matthew W, Ruokonen, Juha, Farhi, Samouil L, Abbondanza, Domenic, McKinley, Eliot T, Persson, Daniel, Betts, Courtney, Sivagnanam, Shamilene, Regev, Aviv, Goecks, Jeremy, Coffey, Robert J, Coussens, Lisa M, Santagata, Sandro, Sorger, Peter K

المصدر: Nature

مصطلحات الفهرس: Article, http://purl.org/eprint/type/JournalArticle

URL: https://hdl.handle.net/1721.1/147096
10.1038/S41592-021-01308-Y
Nature Methods

المؤلفون: Wang, Huan, Huang, Ruixu, Nelson, Jack, Gao, Ce, Tran, Miles, Yeaton, Anna, Felt, Kristen, Pfaff, Kathleen L, Bowman, Teri, Rodig, Scott J, Wei, Kevin, Goods, Brittany A, Farhi, Samouil L

المصدر: bioRxiv ; ISSN:2692-8205

Relation: https://doi.org/10.1101/2023.12.07.570603; https://pubmed.ncbi.nlm.nih.gov/38106230; https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10723440/

الاتاحة: https://doi.org/10.1101/2023.12.07.570603
https://pubmed.ncbi.nlm.nih.gov/38106230
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10723440/

المؤلفون: Stogsdill, Jeffrey A., Kim, Kwanho, Binan, Loïc, Farhi, Samouil L., Levin, Joshua Z., Arlotta, Paola

المصدر: Nature ; volume 608, issue 7924, page 750-756 ; ISSN 0028-0836 1476-4687

الاتاحة: http://dx.doi.org/10.1038/s41586-022-05056-7
https://www.nature.com/articles/s41586-022-05056-7.pdf
https://www.nature.com/articles/s41586-022-05056-7

المؤلفون: Hwang, William L., Jagadeesh, Karthik A., Guo, Jimmy A., Hoffman, Hannah I., Yadollahpour, Payman, Reeves, Jason W., Mohan, Rahul, Drokhlyansky, Eugene, Van Wittenberghe, Nicholas, Ashenberg, Orr, Farhi, Samouil L., Schapiro, Denis, Divakar, Prajan, Miller, Eric, Zollinger, Daniel R., Eng, George, Schenkel, Jason M., Su, Jennifer, Shiau, Carina, Yu, Patrick, Freed-Pastor, William A., Abbondanza, Domenic, Mehta, Arnav, Gould, Joshua, Lambden, Conner, Porter, Caroline B. M., Tsankov, Alexander, Dionne, Danielle, Waldman, Julia, Cuoco, Michael S., Nguyen, Lan, Delorey, Toni, Phillips, Devan, Barth, Jaimie L., Kem, Marina, Rodrigues, Clifton, Ciprani, Debora, Roldan, Jorge, Zelga, Piotr, Jorgji, Vjola, Chen, Jonathan H., Ely, Zackery, Zhao, Daniel, Fuhrman, Kit, Fropf, Robin, Beechem, Joseph M., Loeffler, Jay S., Ryan, David P., Weekes, Colin D., Ferrone, Cristina R.

المساهمون: Ludwig Institute for Cancer Research, Lustgarten Foundation

المصدر: Nature Genetics ; volume 54, issue 8, page 1178-1191 ; ISSN 1061-4036 1546-1718

الاتاحة: http://dx.doi.org/10.1038/s41588-022-01134-8
https://www.nature.com/articles/s41588-022-01134-8.pdf
https://www.nature.com/articles/s41588-022-01134-8

المؤلفون: Ben Sahel, Yair, Bryan, John P., Cleary, Brian, Farhi, Samouil L., Eldar, Yonina C.

المصدر: IEEE Signal Processing Magazine ; volume 39, issue 2, page 45-57 ; ISSN 1053-5888 1558-0792

الاتاحة: http://dx.doi.org/10.1109/msp.2021.3129995
http://xplorestaging.ieee.org/ielx7/79/9721176/09721184.pdf?arnumber=9721184

المؤلفون: Chien, Miao-Ping, Werley, Christopher A., Farhi, Samouil L., Cohen, Adam E.

المساهمون: Gordon and Betty Moore Foundation

المصدر: Chem. Sci. ; volume 6, issue 3, page 1701-1705 ; ISSN 2041-6520 2041-6539

الاتاحة: http://dx.doi.org/10.1039/c4sc03676j
http://pubs.rsc.org/en/content/articlepdf/2015/SC/C4SC03676J

المؤلفون: Hochbaum, Daniel R, Zhao, Yongxin, Farhi, Samouil L, Werley, Christopher A, Kapoor, Vikrant, Zou, Peng, Kralj, Joel M, Maclaurin, Dougal, Smedemark-Margulies, Niklas, Saulnier, Jessica L, Boulting, Gabriella L, Straub, Christoph, Melkonian, Michael, Wong, Gane Ka-Shu, Harrison, D Jed, Murthy, Venkatesh N, Sabatini, Bernardo L, Campbell, Robert E, Cohen, Adam E, Klapoetke, Nathan Cao, Cho, Yongku, Boyden, Edward

المساهمون: Massachusetts Institute of Technology. Department of Biological Engineering, Massachusetts Institute of Technology. Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology. Media Laboratory, McGovern Institute for Brain Research at MIT, Klapoetke, Nathan Cao, Cho, Yongku, Boyden, Edward

المصدر: PMC

وصف الملف: application/pdf

Relation: http://dx.doi.org/10.1038/nmeth.3000; Nature Methods; http://hdl.handle.net/1721.1/109291; Hochbaum, Daniel R; Zhao, Yongxin; Farhi, Samouil L; Klapoetke, Nathan; Werley, Christopher A; Kapoor, Vikrant; Zou, Peng et al. “All-Optical Electrophysiology in Mammalian Neurons Using Engineered Microbial Rhodopsins.” Nature Methods 11, no. 8 (June 2014): 825–833 © 2014 Rights Managed by Nature Publishing Group; orcid:0000-0002-0419-3351

الاتاحة: http://hdl.handle.net/1721.1/109291

المؤلفون: Adam, Yoav, Kim, J.J., Lou, Shan, Zhao, Y., Xie, M.E., Brinks, D., Wu, H., Mostajo-Radji, M.A., Kheifets, S., Parot Fernández, Vicente José, Chettih, S., Williams, K.J., Gmeiner, B., Farhi, Samouil L., Madisen, Linda, Buchanan, E.K., Kinsella, I., Zhou, D., Paninski, L., Harvey, C.D., Zeng, Hongkui, Arlotta, P., Campbell, Robert E., Cohen, Adam E.

مصطلحات موضوعية: Voltage-sensitive dye imaging, Optical recording, Membrane potentials, 660.28424, Ingeniería

وصف الملف: application/pdf

Relation: Nature, vol. 569, no. 7756 (May 2019), pp. 413-417; https://doi.org/10.1038/s41586-019-1166-7; http://www.scopus.com/inward/record.url?eid=2-s2.0-85065234582&partnerID=MN8TOARS; https://repositorio.uc.cl/handle/11534/43783

الاتاحة: https://repositorio.uc.cl/handle/11534/43783
https://doi.org/10.1038/s41586-019-1166-7
http://www.scopus.com/inward/record.url?eid=2-s2.0-85065234582&partnerID=MN8TOARS