المؤلفون: Fang-Yuan Shi, Yu Wang, Dong Huang, Yu Liang, Nan Liang, Xiao-Wei Chen, Ge Gao

المصدر: Genomics, Proteomics & Bioinformatics, Vol 21, Iss 3, Pp 662-673 (2023)

مصطلحات موضوعية: Non-coding variant, Expression-modulating variant, Gene regulation, Algorithm, Web server, Biology (General), QH301-705.5, Computer applications to medicine. Medical informatics, R858-859.7

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1672022921002473; https://doaj.org/toc/1672-0229

URL الوصول: https://doaj.org/article/9f5e7e32728b4f548e7fefa6894383ba

المؤلفون: Yang Gao, Zheng-Rui Fan, Fang-Yuan Shi

المصدر: Frontiers in Endocrinology, Vol 14 (2023)

مصطلحات موضوعية: two-sample Mendelian randomization, hypothyroidism, rheumatoid arthritis, variants analysis, causal relationship, Diseases of the endocrine glands. Clinical endocrinology, RC648-665

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fendo.2023.1179656/full; https://doaj.org/toc/1664-2392

URL الوصول: https://doaj.org/article/b66785578e7544ceaab81b105fe5a69f

المؤلفون: Shantanu Jain, Constantina Bakolitsa, Steven E Brenner, Predrag Radivojac, John Moult, Susanna Repo, Roger A Hoskins, Gaia Andreoletti, Daniel Barsky, Ajithavalli Chellapan, Hoyin Chu, Navya Dabbiru, Naveen K Kollipara, Melissa Ly, Andrew J Neumann, Lipika R Pal, Eric Odell, Gaurav Pandey, Robin C Peters-Petrulewicz, Rajgopal Srinivasan, Stephen F Yee, Sri Jyothsna Yeleswarapu, Maya Zuhl, Ogun Adebali, Ayoti Patra, Michael A Beer, Raghavendra Hosur, Jian Peng, Brady M Bernard, Michael Berry, Shengcheng Dong, Alan P Boyle, Aashish Adhikari, Jingqi Chen, Zhiqiang Hu, Robert Wang, Yaqiong Wang, Maximilian Miller, Yanran Wang, Yana Bromberg, Paola Turina, Emidio Capriotti, James J Han, Kivilcim Ozturk, Hannah Carter, Giulia Babbi, Samuele Bovo, Pietro Di Lena, Pier Luigi Martelli, Castrense Savojardo, Rita Casadio, Melissa S Cline, Greet De Baets, Sandra Bonache, Orland Díez, Sara Gutiérrez-Enríquez, Alejandro Fernández, Gemma Montalban, Lars Ootes, Selen Özkan, Natàlia Padilla, Casandra Riera, Xavier De la Cruz, Mark Diekhans, Peter J Huwe, Qiong Wei, Qifang Xu, Roland L Dunbrack, Valer Gotea, Laura Elnitski, Gennady Margolin, Piero Fariselli, Ivan V Kulakovskiy, Vsevolod J Makeev, Dmitry D Penzar, Ilya E Vorontsov, Alexander V Favorov, Julia R Forman, Marcia Hasenahuer, Maria S Fornasari, Gustavo Parisi, Ziga Avsec, Muhammed H Çelik, Thi Yen Duong Nguyen, Julien Gagneur, Fang-Yuan Shi, Matthew D Edwards, Yuchun Guo, Kevin Tian, Haoyang Zeng, David K Gifford, Jonathan Göke, Jan Zaucha, Julian Gough, Graham R S Ritchie, Adam Frankish, Jonathan M Mudge, Jennifer Harrow, Erin L Young, Yao Yu, Chad D Huff, Katsuhiko Murakami, Yoko Nagai, Tadashi Imanishi, Christopher J Mungall, Julius O B Jacobsen, Dongsup Kim, Chan-Seok Jeong, David T Jones, Mulin Jun Li, Violeta Beleva Guthrie, Rohit Bhattacharya, Yun-Ching Chen, Christopher Douville, Jean Fan, Dewey Kim, David Masica, Noushin Niknafs, Sohini Sengupta, Collin Tokheim, Tychele N Turner, Hui Ting Grace Yeo, Rachel Karchin, Sunyoung Shin, Rene Welch, Sunduz Keles, Yue Li, Manolis Kellis, Carles Corbi-Verge, Alexey V Strokach, Philip M Kim, Teri E Klein, Rahul Mohan, Nicholas A Sinnott-Armstrong, Michael Wainberg, Anshul Kundaje, Nina Gonzaludo, Angel C Y Mak, Aparna Chhibber, Hugo Y K Lam, Dvir Dahary, Simon Fishilevich, Doron Lancet, Insuk Lee, Benjamin Bachman, Panagiotis Katsonis, Rhonald C Lua, Stephen J Wilson, Olivier Lichtarge, Rajendra R Bhat, Laksshman Sundaram, Vivek Viswanath, Riccardo Bellazzi, Giovanna Nicora, Ettore Rizzo, Ivan Limongelli, Aziz M Mezlini, Ray Chang, Serra Kim, Carmen Lai, Robert O'Connor, Scott Topper, Jeroen van den Akker, Alicia Y Zhou, Anjali D Zimmer, Gilad Mishne, Timothy R Bergquist, Marcus R Breese, Rafael F Guerrero, Yuxiang Jiang, Nikki Kiga, Biao Li, Matthew Mort, Kymberleigh A Pagel, Vikas Pejaver, Moses H Stamboulian, Janita Thusberg, Sean D Mooney, Nuttinee Teerakulkittipong, Chen Cao, Kunal Kundu, Yizhou Yin, Chen-Hsin Yu, Michael Kleyman, Chiao-Feng Lin, Mary Stackpole, Stephen M Mount, Gökcen Eraslan, Nikola S Mueller, Tatsuhiko Naito, Aliz R Rao, Johnathan R Azaria, Aharon Brodie, Yanay Ofran, Aditi Garg, Debnath Pal, Alex Hawkins-Hooker, Henry Kenlay, John Reid, Eliseos J Mucaki, Peter K Rogan, Jana M Schwarz, David B Searls, Gyu Rie Lee, Chaok Seok, Andreas Krämer, Sohela Shah, ChengLai V Huang, Jack F Kirsch, Maxim Shatsky, Yue Cao, Haoran Chen, Mostafa Karimi, Oluwaseyi Moronfoye, Yuanfei Sun, Yang Shen, Ron Shigeta, Colby T Ford, Conor Nodzak, Aneeta Uppal, Xinghua Shi, Thomas Joseph, Sujatha Kotte, Sadhna Rana, Aditya Rao, V G Saipradeep, Naveen Sivadasan, Uma Sunderam, Mario Stanke, Andrew Su, Ivan Adzhubey, Daniel M Jordan, Shamil Sunyaev, Frederic Rousseau, Joost Schymkowitz, Joost Van Durme, Sean V Tavtigian, Marco Carraro, Manuel Giollo, Silvio C E Tosatto, Orit Adato, Liran Carmel, Noa E Cohen, Tzila Fenesh, Tamar Holtzer, Tamar Juven-Gershon, Ron Unger, Abhishek Niroula, Ayodeji Olatubosun, Jouni Väliaho, Yang Yang, Mauno Vihinen, Mary E Wahl, Billy Chang, Ka Chun Chong, Inchi Hu, Rui Sun, William Ka Kei Wu, Xiaoxuan Xia, Benny C Zee, Maggie H Wang, Meng Wang, Chunlei Wu, Yutong Lu, Ken Chen, Yuedong Yang, Christopher M Yates, Anat Kreimer, Zhongxia Yan, Nir Yosef, Huying Zhao, Zhipeng Wei, Zhaomin Yao, Fengfeng Zhou, Lukas Folkman, Yaoqi Zhou, Roxana Daneshjou, Russ B Altman, Fumitaka Inoue, Nadav Ahituv, Adam P Arkin, Federica Lovisa, Paolo Bonvini, Sarah Bowdin, Stefano Gianni, Elide Mantuano, Velia Minicozzi, Leonore Novak, Alessandra Pasquo, Annalisa Pastore, Maria Petrosino, Rita Puglisi, Angelo Toto, Liana Veneziano, Roberta Chiaraluce, Mad P Ball, Jason R Bobe, George M Church, Valerio Consalvi, David N Cooper, Bethany A Buckley, Molly B Sheridan, Garry R Cutting, Maria Chiara Scaini, Kamil J Cygan, Alger M Fredericks, David T Glidden, Christopher Neil, Christy L Rhine, William G Fairbrother, Aileen Y Alontaga, Aron W Fenton, Kenneth A Matreyek, Lea M Starita, Douglas M Fowler, Britt-Sabina Löscher, Andre Franke, Scott I Adamson, Brenton R Graveley, Joe W Gray, Mary J Malloy, John P Kane, Maria Kousi, Nicholas Katsanis, Max Schubach, Martin Kircher, Paul L F Tang, Pui-Yan Kwok, Richard H Lathrop, Wyatt T Clark, Guoying K Yu, Jonathan H LeBowitz, Francesco Benedicenti, Elisa Bettella, Stefania Bigoni, Federica Cesca, Isabella Mammi, Cristina Marino-Buslje, Donatella Milani, Angela Peron, Roberta Polli, Stefano Sartori, Franco Stanzial, Irene Toldo, Licia Turolla, Maria C Aspromonte, Mariagrazia Bellini, Emanuela Leonardi, Xiaoming Liu, Christian Marshall, W Richard McCombie, Lisa Elefanti, Chiara Menin, M Stephen Meyn, Alessandra Murgia, Kari C Y Nadeau, Susan L Neuhausen, Robert L Nussbaum, Mehdi Pirooznia, James B Potash, Dago F Dimster-Denk, Jasper D Rine, Jeremy R Sanford, Michael Snyder, Atina G Cote, Song Sun, Marta W Verby, Jochen Weile, Frederick P Roth, Ryan Tewhey, Pardis C Sabeti, Joan Campagna, Marwan M Refaat, Julianne Wojciak, Soren Grubb, Nicole Schmitt, Jay Shendure, Amanda B Spurdle, Dimitri J Stavropoulos, Nephi A Walton, Peter P Zandi, Elad Ziv, Wylie Burke, Flavia Chen, Lawrence R Carr, Selena Martinez, Jodi Paik, Julie Harris-Wai, Mark Yarborough, Stephanie M Fullerton, Barbara A Koenig, Gregory McInnes, Dustin Shigaki, John-Marc Chandonia, Mabel Furutsuki, Laura Kasak, Changhua Yu, Rui Chen, Iddo Friedberg, Gad A Getz, Qian Cong, Lisa N Kinch, Jing Zhang, Nick V Grishin, Alin Voskanian, Maricel G Kann, Elizabeth Tran, Nilah M Ioannidis, Jesse M Hunter, Rupa Udani, Binghuang Cai, Alexander A Morgan, Artem Sokolov, Joshua M Stuart, Giovanni Minervini, Alexander M Monzon, Serafim Batzoglou, Atul J Butte, Marc S Greenblatt, Reece K Hart, Ryan Hernandez, Tim J P Hubbard, Scott Kahn, Anne O'Donnell-Luria, Pauline C Ng, John Shon, Joris Veltman, Justin M Zook

المساهمون: Jain, Shantanu, Bakolitsa, Constantina, E Brenner, Steven, Radivojac, Predrag, Moult, John, Repo, Susanna, A Hoskins, Roger, Andreoletti, Gaia, Barsky, Daniel, Chellapan, Ajithavalli, Chu, Hoyin, Dabbiru, Navya, K Kollipara, Naveen, Ly, Melissa, J Neumann, Andrew, R Pal, Lipika, Odell, Eric, Pandey, Gaurav, C Peters-Petrulewicz, Robin, Srinivasan, Rajgopal, F Yee, Stephen, Jyothsna Yeleswarapu, Sri, Zuhl, Maya, Adebali, Ogun, Patra, Ayoti, A Beer, Michael, Hosur, Raghavendra, Peng, Jian, M Bernard, Brady, Berry, Michael, Dong, Shengcheng, P Boyle, Alan, Adhikari, Aashish, Chen, Jingqi, Hu, Zhiqiang, Wang, Robert, Wang, Yaqiong, Miller, Maximilian, Wang, Yanran, Bromberg, Yana, Turina, Paola, Capriotti, Emidio, J Han, Jame, Ozturk, Kivilcim, Carter, Hannah, Babbi, Giulia, Bovo, Samuele, Di Lena, Pietro, Luigi Martelli, Pier, Savojardo, Castrense, Casadio, Rita, S Cline, Melissa, De Baets, Greet, Bonache, Sandra, Díez, Orland, Gutiérrez-Enríquez, Sara, Fernández, Alejandro, Montalban, Gemma, Ootes, Lar, Özkan, Selen, Padilla, Natàlia, Riera, Casandra, De la Cruz, Xavier, Diekhans, Mark, J Huwe, Peter, Wei, Qiong, Xu, Qifang, L Dunbrack, Roland, Gotea, Valer, Elnitski, Laura, Margolin, Gennady, Fariselli, Piero, V Kulakovskiy, Ivan, J Makeev, Vsevolod, D Penzar, Dmitry, E Vorontsov, Ilya, V Favorov, Alexander, R Forman, Julia, Hasenahuer, Marcia, S Fornasari, Maria, Parisi, Gustavo, Avsec, Ziga, H Çelik, Muhammed, Yen Duong Nguyen, Thi, Gagneur, Julien, Shi, Fang-Yuan, D Edwards, Matthew, Guo, Yuchun, Tian, Kevin, Zeng, Haoyang, K Gifford, David, Göke, Jonathan, Zaucha, Jan, Gough, Julian, S Ritchie, Graham R, Frankish, Adam, M Mudge, Jonathan, Harrow, Jennifer, L Young, Erin, Yu, Yao

مصطلحات موضوعية: genetic variant, missense mutation, protein stability

Relation: info:eu-repo/semantics/altIdentifier/pmid/38389099; volume:22; issue:22;25(1):53.; firstpage:1; lastpage:46; numberofpages:46; journal:GENOME BIOLOGY; https://hdl.handle.net/11573/1703621; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85185859716

الاتاحة: https://hdl.handle.net/11573/1703621
https://doi.org/10.1186/s13059-023-03113-6

المؤلفون: Fang-Yuan Shi, Jin-Xing Li, Gu Liu, Liu-Ying Wang, Min Zhang

المصدر: International Journal of Remote Sensing. 43:3655-3670

مصطلحات موضوعية: General Earth and Planetary Sciences

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::9fd63362c36b3399fe529bf2c2f6371b
https://doi.org/10.1080/01431161.2022.2077153

المؤلفون: Zhi-han CHEN (陈志翰), Lin YANG (杨霖), Guo-rui YAN (闫国瑞), Qi LIU (刘琪), Jiao-jiao CAO (曹娇娇), Fang-yuan SHI (时方圆), Zhi-fang XU (徐枝芳), Yi GUO (郭义), Xiao-wei LIN (林小伟)

المصدر: World Journal of Acupuncture - Moxibustion.

مصطلحات موضوعية: Complementary and alternative medicine

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::fe2fcc1a12a7b7a1dfe5ddb7eeb07a99
https://doi.org/10.1016/j.wjam.2023.05.002

المؤلفون: Yang Gao, Zheng-Rui Fan, Fang-Yuan Shi

مصطلحات موضوعية: Endocrinology, Reproduction, Cell Metabolism, two-sample Mendelian randomization, hypothyroidism, rheumatoid arthritis, variants analysis, causal relationship

Relation: https://figshare.com/articles/dataset/Table_1_Hypothyroidism_and_rheumatoid_arthritis_a_two-sample_Mendelian_randomization_study_xlsx/23260949

الاتاحة: https://doi.org/10.3389/fendo.2023.1179656.s002
https://figshare.com/articles/dataset/Table_1_Hypothyroidism_and_rheumatoid_arthritis_a_two-sample_Mendelian_randomization_study_xlsx/23260949

المؤلفون: Yang Gao, Zheng-Rui Fan, Fang-Yuan Shi

مصطلحات موضوعية: Endocrinology, Reproduction, Cell Metabolism, two-sample Mendelian randomization, hypothyroidism, rheumatoid arthritis, variants analysis, causal relationship

Relation: https://figshare.com/articles/dataset/DataSheet_1_Hypothyroidism_and_rheumatoid_arthritis_a_two-sample_Mendelian_randomization_study_docx/23260946

الاتاحة: https://doi.org/10.3389/fendo.2023.1179656.s001
https://figshare.com/articles/dataset/DataSheet_1_Hypothyroidism_and_rheumatoid_arthritis_a_two-sample_Mendelian_randomization_study_docx/23260946

المؤلفون: Miao Ding, Qingsong Wang, Ge Gao, Yujie Sun, Yichao Zhao, Wen Li, Huayu Zhao, Dongyi Xu, Mei Hou, Lan Liu, Jianguo Ji, Jun Li, Fang-Yuan Shi, Yingfang Liu, Xiuzhen Bai, Jingyan Liu, Rong Guo

المصدر: Nature Cell Biology. 21:1273-1285

مصطلحات موضوعية: DNA End-Joining Repair, Carcinogenesis, DNA damage, Chromosomal translocation, medicine.disease_cause, Translocation, Genetic, Mice, 03 medical and health sciences, chemistry.chemical_compound, 0302 clinical medicine, Intermediate Filament Proteins, Nuclear Matrix-Associated Proteins, medicine, Animals, Chromosomes, Human, Humans, DNA Breaks, Double-Stranded, Nuclear Matrix, Nuclear protein, 030304 developmental biology, 0303 health sciences, Carcinoma, Cell Biology, DNA repair protein XRCC4, Lamin Type A, Cell biology, DNA-Binding Proteins, DNA Repair Enzymes, HEK293 Cells, chemistry, 030220 oncology & carcinogenesis, DNA, Lamin

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f9d0374ee32f478465e008ab4570e4f2
https://doi.org/10.1038/s41556-019-0388-0

المؤلفون: Fang-Yuan Shi, Yu Wang, Yu Liang, Ge Gao

مصطلحات موضوعية: Computational Mathematics, Phenotype, Databases, Factual, Database, Computer science, Genetics, Humans, computer.software_genre, Molecular Biology, Biochemistry, computer

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::27300e18f225a8313ddaccc494d0282b
https://doi.org/10.1101/2021.02.24.432622

المؤلفون: Fang-Yuan Shi, Yu Wang, Dong Huang, Yu Liang, Nan Liang, Xiao-Wei Chen, Ge Gao

المصدر: Genomics, proteomicsbioinformatics.

مصطلحات موضوعية: Computational Mathematics, Genetics, Molecular Biology, Biochemistry

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::196724225623dc9920a512ca2423ea01
https://pubmed.ncbi.nlm.nih.gov/34890839

المؤلفون: Xiang-Gui Li, Fang-Yuan Shi, Shu-Cun Li

المصدر: International Journal of Nonlinear Sciences and Numerical Simulation. 19:239-249

مصطلحات موضوعية: Physics, Applied Mathematics, Numerical analysis, Computational Mechanics, General Physics and Astronomy, Statistical and Nonlinear Physics, 01 natural sciences, 010305 fluids & plasmas, chemistry.chemical_compound, symbols.namesake, chemistry, Mechanics of Materials, Modeling and Simulation, 0103 physical sciences, symbols, 010306 general physics, Engineering (miscellaneous), Nonlinear Schrödinger equation, Derivative (chemistry), Mathematical physics

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::8c38f4e2d68e793ad2893a9f3edf1707
https://doi.org/10.1515/ijnsns-2016-0184

المؤلفون: Si-Jin Cheng, Fang-Yuan Shi, Huan Liu, Yang Ding, Shuai Jiang, Ge Gao

المساهمون: State Key Laboratory of Protein and Plant Gene Research,School of Life Sciences,Center for Bioinformatics,Peking University,Beijing 100871,People', s Republic of China

المصدر: 万方

مصطلحات موضوعية: Genetic variants annotation Loss-of-function variants Penetrance Web server

Relation: 2016年第三届全国功能基因组学学术峰会论文集百迈克研究院. 2016, 41-41.; 1928347; http://hdl.handle.net/20.500.11897/480692

الاتاحة: https://hdl.handle.net/20.500.11897/480692

المؤلفون: Fang-Yuan Shi, Ge Gao, Si-Jin Cheng, Shuai Jiang, Yang Ding

المصدر: Journal of genetics and genomics = Yi chuan xue bao. 45(7)

مصطلحات موضوعية: 0301 basic medicine, Internet, Binding Sites, Genotype, Genome, Human, Genetic Variation, Genomics, Context (language use), Molecular Sequence Annotation, Computational biology, Biology, DNA binding site, 03 medical and health sciences, Annotation, 030104 developmental biology, Genetics, Humans, Human genome, Identification (biology), 1000 Genomes Project, Molecular Biology, Sequence (medicine), Transcription Factors

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::02e260097b88f767f89e2572065af38e
https://pubmed.ncbi.nlm.nih.gov/30054217

المؤلفون: Qiang Sun, Fang-yuan Shi, Jing-hui Fang, Guang-yu Fan

المصدر: DEStech Transactions on Materials Science and Engineering.

مصطلحات موضوعية: Data collection, business.industry, Computer science, Network packet, Computer Science::Networking and Internet Architecture, Life time, Energy consumption, business, Wireless sensor network, Hop (networking), Computer network

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::8460fb8a7c4efcef03013d8983471145
https://doi.org/10.12783/dtmse/amst2016/11341

المؤلفون: Nan Liang, Si-Jin Cheng, Ge Gao, Shuai Jiang, Fang-Yuan Shi, Yang Ding, Huan Liu

المصدر: Nucleic Acids Research

مصطلحات موضوعية: 0301 basic medicine, Phenylketonurias, Context (language use), Genomics, Biology, Genome, 03 medical and health sciences, 0302 clinical medicine, Genetic variation, Genetics, Humans, 1000 Genomes Project, Genome, Human, Genetic Variation, High-Throughput Nucleotide Sequencing, Epistasis, Genetic, Molecular Sequence Annotation, 030104 developmental biology, Mutation, Mutation (genetic algorithm), Methods Online, Epistasis, Software, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::65ac247a4c3d9f2e8237a75121951c73
https://doi.org/10.1093/nar/gkx041

المؤلفون: Si-Jin Cheng, Fang-Yuan Shi, Huan Liu, Yang Ding, Shuai Jiang, Nan Liang, Ge Gao

المصدر: Nucleic Acids Research; 6/2/2017, Vol. 45 Issue 10, p1-8, 8p

المؤلفون: Xing Tang, Fang-Yuan Shi, Ge Gao, Mei Hou, Fenglin Liu, Feng Tian

المصدر: BMC Genomics

مصطلحات موضوعية: 0301 basic medicine, Web server, Interactive design, Annotation, Computational biology, Biology, computer.software_genre, Long noncoding RNAs, 03 medical and health sciences, User-Computer Interface, 0302 clinical medicine, Genetics, Humans, LncRNAs, computer.programming_language, Abstraction (linguistics), Internet, business.industry, Repertoire, GRASP, Proteins, Pipeline (software), JSON, 030104 developmental biology, 030220 oncology & carcinogenesis, Nucleic Acid Conformation, The Internet, RNA, Long Noncoding, User interface, Web service, business, Transcriptome, computer, Software, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b10d514e24adde139c72e28707f44d02