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1Academic Journal
المؤلفون: Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R, Lee, Alexandra J, Kacsoh, Balint Z, Crocker, Alex W, Lewis, Kimberley A, Georghiou, George, Nguyen, Huy N, Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S, Dalkıran, Alperen, Cetin Atalay, Rengul, Zhang, Chengxin, Hurto, Rebecca L, Freddolino, Peter L, Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernández, José M, Gemovic, Branislava, Perovic, Vladimir R, Davidović, Radoslav S, Sumonja, Neven, Veljkovic, Nevena, Asgari, Ehsaneddin, Mofrad, Mohammad RK, Profiti, Giuseppe, Savojardo, Castrense, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Kahanda, Indika, Thurlby, Natalie, McHardy, Alice C, Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex A, Antczak, Magdalena, Fabris, Fabio, Wass, Mark N, Hou, Jie, Cheng, Jianlin, Wang, Zheng, Romero, Alfonso E, Paccanaro, Alberto, Yang, Haixuan, Goldberg, Tatyana, Zhao, Chenguang, Holm, Liisa, Törönen, Petri, Medlar, Alan J, Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Chi, Po-Han, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter W, Dessimoz, Christophe, Vidulin, Vedrana, Dzeroski, Saso, Sillitoe, Ian, Das, Sayoni, Lees, Jonathan Gill, Jones, David T, Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Warwick Vesztrocy, Alex, Rodriguez, Jose Manuel, Tress, Michael L, Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel B, Reeb, Jonas, Ritchie, David W, Aridhi, Sabeur, Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Koo, Da Chen Emily, Bonneau, Richard, Gligorijević, Vladimir, Barot, Meet, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico
المصدر: Genome Biology. 20(1)
مصطلحات موضوعية: Human Genome, Networking and Information Technology R&D (NITRD), Genetics, Generic health relevance, Animals, Biofilms, Candida albicans, Drosophila melanogaster, Genome, Bacterial, Genome, Fungal, Humans, Locomotion, Memory, Long-Term, Molecular Sequence Annotation, Pseudomonas aeruginosa, Protein function prediction, Long-term memory, Biofilm, Critical assessment, Community challenge, Environmental Sciences, Biological Sciences, Information and Computing Sciences, Bioinformatics
وصف الملف: application/pdf
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2Academic Journal
المؤلفون: Artemova, Svetlana, von Schenck, Ursula, Fa, Rui, Stoessel, Daniel, Nowparast Rostami, Hadiseh, Madiot, Pierre-Ephrem, Januel, Jean-Marie, Pagonis, Daniel, Landelle, Caroline, Gallouche, Meghann, Cancé, Christophe, Olive, Frederic, Moreau-Gaudry, Alexandre, Prieur, Sigurd, Bosson, Jean-Luc
المساهمون: Centre Hospitalier Universitaire CHU Grenoble (CHUGA), Translational Innovation in Medicine and Complexity / Recherche Translationnelle et Innovation en Médecine et Complexité - UMR 5525 (TIMC), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP), Université Grenoble Alpes (UGA), Life Science Analytics Elsevier, Elsevier Health Analytics, ANR-19-P3IA-0003,MIAI,MIAI @ Grenoble Alpes(2019)
المصدر: ISSN: 2044-6055 ; BMJ Open ; https://hal.science/hal-04449022 ; BMJ Open, 2023, BMJ OPEN, 13 (8), pp.e070929. ⟨10.1136/bmjopen-2022-070929⟩ ; https://journals.bmj.com/home.
مصطلحات موضوعية: PREVENTIVE MEDICINE, REGISTRIES, Risk management, STATISTICS & RESEARCH METHODS, MESH: Cohort Studies, Computer Simulation, Datasets as Topic, Iatrogenic Disease, Length of Stay, Machine Learning, Risk Assessment, [INFO]Computer Science [cs]
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3Academic Journal
المؤلفون: Stoessel, Daniel, Fa, Rui, Artemova, Svetlana, von Schenck, Ursula, Nowparast Rostami, Hadiseh, Madiot, Pierre-Ephrem, Landelle, Caroline, Olive, Fréderic, Foote, Alison, Moreau-Gaudry, Alexandre, Bosson, Jean-Luc
المصدر: BMC Medical Informatics and Decision Making ; volume 23, issue 1 ; ISSN 1472-6947
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4Dissertation/ Thesis
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5Academic Journal
المؤلفون: Hai-ping Zhang, Zi-liang Yu, Bing-bing Wu, Fa-rui Sun
المصدر: Journal of Orthopaedic Surgery and Research, Vol 15, Iss 1, Pp 1-10 (2020)
مصطلحات موضوعية: PENK, Osteosarcoma, PI3K, Akt, Migration, Orthopedic surgery, RD701-811, Diseases of the musculoskeletal system, RC925-935
وصف الملف: electronic resource
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6Academic Journal
المؤلفون: Xu, Di-Mei, Chai, Fa-Rui, Liang, Xu-Fang, Lu, Ke
المساهمون: the National Natural Science Foundation of China, the Key Research & Development Program of Hubei Province
المصدر: Functional & Integrative Genomics ; volume 24, issue 2 ; ISSN 1438-793X 1438-7948
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7Academic Journal
المؤلفون: Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R., Lee, Alexandra J., Kacsoh, Balint Z., Crocker, Alex W., Lewis, Kimberley A., Georghiou, George, Nguyen, Huy N., Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S., Dalkiran, Alperen, Atalay, Rengul Cetin, Zhang, Chengxin, Hurto, Rebecca L., Freddolino, Peter L., Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernandez, Jose M., Gemovic, Branislava, Perovic, Vladimir R., Davidovic, Radoslav S., Sumonja, Neven, Veljkovic, Nevena, Asgari, Ehsaneddin, Mofrad, Mohammad R. K., Profiti, Giuseppe, Savojardo, Castrense, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Kahanda, Indika, Thurlby, Natalie, McHardy, Alice C., Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex A., Antczak, Magdalena, Fabris, Fabio, Wass, Mark N., Hou, Jie, Cheng, Jianlin, Wang, Zheng, Romero, Alfonso E., Paccanaro, Alberto, Yang, Haixuan, Goldberg, Tatyana, Zhao, Chenguang, Holm, Liisa, Törönen, Petri, Medlar, Alan J., Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Chi, Po-Han, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter W., Dessimoz, Christophe, Vidulin, Vedrana, Dzeroski, Saso, Sillitoe, Ian, Das, Sayoni, Lees, Jonathan Gill, Jones, David T., Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Vesztrocy, Alex Warwick, Rodriguez, Jose Manuel, Tress, Michael L., Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel B., Reeb, Jonas, Ritchie, David W., Aridhi, Sabeur, Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Koo, Da Chen Emily, Bonneau, Richard, Gligorijevic, Vladimir, Barot, Meet, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico, Falda, Marco, Berselli, Michele, Tosatto, Silvio C. E., Carraro, Marco, Piovesan, Damiano, Rehman, Hafeez Ur, Mao, Qizhong, Zhang, Shanshan, Vucetic, Slobodan, Black, Gage S., Jo, Dane, Suh, Erica, Dayton, Jonathan B., Larsen, Dallas J., Omdahl, Ashton R., McGuffin, Liam J., Brackenridge, Danielle A., Babbitt, Patricia C., Yunes, Jeffrey M., Fontana, Paolo, Zhang, Feng, Zhu, Shanfeng, You, Ronghui, Zhang, Zihan, Dai, Suyang, Yao, Shuwei, Tian, Weidong, Cao, Renzhi, Chandler, Caleb, Amezola, Miguel, Johnson, Devon, Chang, Jia-Ming, Liao, Wen-Hung, Liu, Yi-Wei, Pascarelli, Stefano, Frank, Yotam, Hoehndorf, Robert, Kulmanov, Maxat, Boudellioua, Imane, Politano, Gianfranco, Di Carlo, Stefano, Benso, Alfredo, Hakala, Kai, Ginter, Filip, Mehryary, Farrokh, Kaewphan, Suwisa, Bjorne, Jari, Moen, Hans, Tolvanen, Martti E. E., Salakoski, Tapio, Kihara, Daisuke, Jain, Aashish, Smuc, Tomislav, Altenhoff, Adrian, Ben-Hur, Asa, Rost, Burkhard, Brenner, Steven E., Orengo, Christine A., Jeffery, Constance J., Bosco, Giovanni, Hogan, Deborah A., Martin, Maria J., O'Donovan, Claire, Mooney, Sean D., Greene, Casey S., Radivojac, Predrag, Friedberg, Iddo
المساهمون: Computational genomics, Institute of Biotechnology, Bioinformatics, Genetics, Helsinki Institute of Life Science HiLIFE, Discovery Research Group/Prof. Hannu Toivonen
مصطلحات موضوعية: Protein function prediction, Long-term memory, Biofilm, Critical assessment, Community challenge, CANDIDA-ALBICANS, ONTOLOGY, IDENTIFICATION, GENERATION, LIBRARY, Medical biotechnology
وصف الملف: application/pdf
Relation: The work of IF was funded, in part, by the National Science Foundation award DBI-1458359. The work of CSG and AJL was funded, in part, by the National Science Foundation award DBI-1458390 and GBMF 4552 from the Gordon and Betty Moore Foundation. The work of DAH and KAL was funded, in part, by the National Science Foundation award DBI-1458390, National Institutes of Health NIGMS P20 GM113132, and the Cystic Fibrosis Foundation CFRDP STANTO19R0. The work of AP, HY, AR, and MT was funded by BBSRC grants BB/K004131/1, BB/F00964X/1 and BB/M025047/1, Consejo Nacional de Ciencia y Tecnologia Paraguay (CONACyT) grants 14-INV-088 and PINV15-315, and NSF Advances in BioInformatics grant 1660648. The work of JC was partially supported by an NIH grant (R01GM093123) and two NSF grants (DBI 1759934 and IIS1763246). ACM acknowledges the support by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy -EXC 2155 "RESIST" - Project ID 39087428. DK acknowledges the support from the National Institutes of Health (R01GM123055) and the National Science Foundation (DMS1614777, CMMI1825941). PB acknowledges the support from the National Institutes of Health (R01GM60595). GB and BZK acknowledge the support from the National Science Foundation (NSF 1458390) and NIH DP1MH110234. FS was funded by the ERC StG 757700 "HYPER-INSIGHT" and by the Spanish Ministry of Science, Innovation and Universities grant BFU2017-89833-P. FS further acknowledges the funding from the Severo Ochoa award to the IRB Barcelona. TS was funded by the Centre of Excellence project "BioProspecting of Adriatic Sea", co-financed by the Croatian Government and the European Regional Development Fund (KK.01.1.1.01.0002). The work of SK was funded by ATT Tieto kayttoon grant and Academy of Finland. JB and HM acknowledge the support of the University of Turku, the Academy of Finland and CSC -IT Center for Science Ltd. TB and SM were funded by the NIH awards UL1 TR002319 and U24 TR002306. The work of CZ and ZW was funded by the National Institutes of Health R15GM120650 to ZW and start-up funding from the University of Miami to ZW. The work of PWR was supported by the National Cancer Institute of the National Institutes of Health under Award Number U01CA198942. PR acknowledges NSF grant DBI-1458477. PT acknowledges the support from Helsinki Institute for Life Sciences. The work of AJM was funded by the Academy of Finland (No. 292589). The work of FZ and WT was funded by the National Natural Science Foundation of China (31671367, 31471245, 91631301) and the National Key Research and Development Program of China (2016YFC1000505, 2017YFC0908402]. CS acknowledges the support by the Italian Ministry of Education, University and Research (MIUR) PRIN 2017 project 2017483NH8. SZ is supported by the National Natural Science Foundation of China (No. 61872094 and No. 61572139) and Shanghai Municipal Science and Technology Major Project (No. 2017SHZDZX01). PLF and RLH were supported by the National Institutes of Health NIH R35-GM128637 and R00-GM097033. JG, DTJ, CW, DC, and RF were supported by the UK Biotechnology and Biological Sciences Research Council (BB/N019431/1, BB/L020505/1, and BB/L002817/1) and Elsevier. The work of YZ and CZ was funded in part by the National Institutes of Health award GM083107, GM116960, and AI134678; the National Science Foundation award DBI1564756; and the Extreme Science and Engineering Discovery Environment (XSEDE) award MCB160101 and MCB160124.; Zhou , N , Jiang , Y , Bergquist , T R , Lee , A J , Kacsoh , B Z , Crocker , A W , Lewis , K A , Georghiou , G , Nguyen , H N , Hamid , M N , Davis , L , Dogan , T , Atalay , V , Rifaioglu , A S , Dalkiran , A , Atalay , R C , Zhang , C , Hurto , R L , Freddolino , P L , Zhang , Y , Bhat , P , Supek , F , Fernandez , J M , Gemovic , B , Perovic , V R , Davidovic , R S , Sumonja , N , Veljkovic , N , Asgari , E , Mofrad , M R K , Profiti , G , Savojardo , C , Martelli , P L , Casadio , R , Boecker , F , Schoof , H , Kahanda , I , Thurlby , N , McHardy , A C , Renaux , A , Saidi , R , Gough , J , Freitas , A A , Antczak , M , Fabris , F , Wass , M N , Hou , J , Cheng , J , Wang , Z , Romero , A E , Paccanaro , A , Yang , H , Goldberg , T , Zhao , C , Holm , L , Törönen , P , Medlar , A J , Zosa , E , Borukhov , I , Novikov , I , Wilkins , A , Lichtarge , O , Chi , P-H , Tseng , W-C , Linial , M , Rose , P W , Dessimoz , C , Vidulin , V , Dzeroski , S , Sillitoe , I , Das , S , Lees , J G , Jones , D T , Wan , C , Cozzetto , D , Fa , R , Torres , M , Vesztrocy , A W , Rodriguez , J M , Tress , M L , Frasca , M , Notaro , M , Grossi , G , Petrini , A , Re , M , Valentini , G , Mesiti , M , Roche , D B , Reeb , J , Ritchie , D W , Aridhi , S , Alborzi , S Z , Devignes , M-D , Koo , D C E , Bonneau , R , Gligorijevic , V , Barot , M , Fang , H , Toppo , S , Lavezzo , E , Falda , M , Berselli , M , Tosatto , S C E , Carraro , M , Piovesan , D , Rehman , H U , Mao , Q , Zhang , S , Vucetic , S , Black , G S , Jo , D , Suh , E , Dayton , J B , Larsen , D J , Omdahl , A R , McGuffin , L J , Brackenridge , D A , Babbitt , P C , Yunes , J M , Fontana , P , Zhang , F , Zhu , S , You , R , Zhang , Z , Dai , S , Yao , S , Tian , W , Cao , R , Chandler , C , Amezola , M , Johnson , D , Chang , J-M , Liao , W-H , Liu , Y-W , Pascarelli , S , Frank , Y , Hoehndorf , R , Kulmanov , M , Boudellioua , I , Politano , G , Di Carlo , S , Benso , A , Hakala , K , Ginter , F , Mehryary , F , Kaewphan , S , Bjorne , J , Moen , H , Tolvanen , M E E , Salakoski , T , Kihara , D , Jain , A , Smuc , T , Altenhoff , A , Ben-Hur , A , Rost , B , Brenner , S E , Orengo , C A , Jeffery , C J , Bosco , G , Hogan , D A , Martin , M J , O'Donovan , C , Mooney , S D , Greene , C S , Radivojac , P & Friedberg , I 2019 , ' The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens ' , Genome Biology , vol. 20 , no. 1 , 244 . https://doi.org/10.1186/s13059-019-1835-8; ORCID: /0000-0003-2482-0663/work/68617657; http://hdl.handle.net/10138/309448; bbcc4816-628a-4e90-8797-a902971e0328; 000498615000001
الاتاحة: http://hdl.handle.net/10138/309448
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8Academic Journal
المؤلفون: Wan, Cen, Cozzetto, Domenico, Fa, Rui, Jones, David T.
المساهمون: Porollo, Alexey, Biotechnology and Biological Sciences Research Council, Elsevier
المصدر: PLOS ONE ; volume 14, issue 7, page e0209958 ; ISSN 1932-6203
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9Academic Journal
المؤلفون: Fa, Rui, Cozzetto, Domenico, Wan, Cen, Jones, David T.
المساهمون: Kurgan, Lukasz, Elsevier Foundation
المصدر: PLOS ONE ; volume 13, issue 6, page e0198216 ; ISSN 1932-6203
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10Academic Journal
المؤلفون: Merryweather-Clarke, Alison, Tipping, Alex, Lamikanra, Abigail, Fa, Rui, Abu-Jamous, Basel, Tsang, Hoi, Carpenter, Lee, Robson, Kathryn, Nandi, Asoke, Roberts, David
مصطلحات موضوعية: Erythropoiesis, Transcriptome, hiPSC, SMART and Bi-CoPaM
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11Academic Journal
المؤلفون: Merryweather-Clarke, Alison T., Tipping, Alex J., Lamikanra, Abigail A., Fa, Rui, Abu-Jamous, Basel, Tsang, Hoi Pat, Carpenter, Lee, Robson, Kathryn J. H., Nandi, Asoke K., Roberts, David J.
المساهمون: Health Services and Delivery Research (HS&DR) Programme, National Institute for Health Research (NIHR), UK, NIHR-RP-PG-0310National Institute for Health Research (NIHR), UK, NIHR-RP-PG-National Institute for Health Research (NIHR), UK, National Health Service Blood and Transplant (NHSBT) and National Institute for Health Research (NIHR), UK, National Health Service Blood and Transplant (NHSBT), National Institute for Health Biomedical Research Centre Programme at Oxford and by National Institute for Health Research (NIHR), UK
المصدر: BMC Genomics ; volume 17, issue 1 ; ISSN 1471-2164
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12Conference
المؤلفون: Abu-Jamous, Basel, Fa, Rui, Nandi, A.K., Roberts, David
المصدر: EUSIPCO, European Signal Processing Conference, Lisbon, Portugal, 2014
Relation: https://doi.org/; https://doi.org/10.5281/zenodo.43915; oai:zenodo.org:43915
الاتاحة: https://doi.org/10.5281/zenodo.43915
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13Conference
المؤلفون: Carli, Marco, De Bernardinis, Virginia, Fa, Rui, Nandi, A.K.
المصدر: EUSIPCO, European Signal Processing Conference, Lisbon, Portugal, 2014
Relation: https://doi.org/; https://doi.org/10.5281/zenodo.43776; oai:zenodo.org:43776
الاتاحة: https://doi.org/10.5281/zenodo.43776
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14Conference
المؤلفون: Abu-Jamous, Basel, Fa, Rui, Nandi, A.K.
المصدر: EUSIPCO, European Signal Processing Conference, Marrakech, Morocco, 2013
Relation: https://doi.org/; https://doi.org/10.5281/zenodo.43378; oai:zenodo.org:43378
الاتاحة: https://doi.org/10.5281/zenodo.43378
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15Conference
المؤلفون: Abu-Jamous, Basel, Fa, Rui, Nandi, A.K.
المصدر: EUSIPCO, European Signal Processing Conference, Bucharest, Romania, 2012
Relation: https://doi.org/; https://doi.org/10.5281/zenodo.42846; oai:zenodo.org:42846
الاتاحة: https://doi.org/10.5281/zenodo.42846
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16Conference
المؤلفون: Abu-Jamous, Basel, Fa, Rui, Nandi, A.K., Roberts, David
المصدر: EUSIPCO, European Signal Processing Conference, Bucharest, Romania, 2012
Relation: https://doi.org/; https://doi.org/10.5281/zenodo.42847; oai:zenodo.org:42847
الاتاحة: https://doi.org/10.5281/zenodo.42847
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17Conference
المؤلفون: Fa, Rui, Nandi, A.K.
المصدر: EUSIPCO, European Signal Processing Conference, Bucharest, Romania, 2012
Relation: https://doi.org/; https://doi.org/10.5281/zenodo.52450; oai:zenodo.org:52450
الاتاحة: https://doi.org/10.5281/zenodo.52450
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18Academic Journal
المؤلفون: Abu-Jamous, Basel, Fa, Rui, Roberts, David J., Nandi, Asoke K.
المصدر: BMC Bioinformatics ; volume 16, issue 1 ; ISSN 1471-2105
الاتاحة: http://dx.doi.org/10.1186/s12859-015-0614-0
http://link.springer.com/article/10.1186/s12859-015-0614-0/fulltext.html
http://link.springer.com/content/pdf/10.1186/s12859-015-0614-0.pdf
http://link.springer.com/content/pdf/10.1186/s12859-015-0614-0
https://link.springer.com/content/pdf/10.1186/s12859-015-0614-0.pdf -
19Academic Journal
المؤلفون: Abu-Jamous, Basel, Fa, Rui, Roberts, David J., Nandi, Asoke
مصطلحات موضوعية: ribosome biogenesis, stress response, co-expression, co-regulation, genome-wide analysis, budding yeast, Bi-CoPaM
وصف الملف: application/pdf
Relation: BMC Bioinformatics; http://www.biomedcentral.com/content/pdf/1471-2105-15-322.pdf; 15; CONVID_23886949
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20Academic Journal
المؤلفون: Fa, Rui, Roberts, David J., Nandi, Asoke K.
المساهمون: Gómez, Sergio
المصدر: PLoS ONE ; volume 9, issue 4, page e94141 ; ISSN 1932-6203