المؤلفون: Antti Kiviaho, Sini K. Eerola, Heini M. L. Kallio, Maria K. Andersen, Miina Hoikka, Aliisa M. Tiihonen, Iida Salonen, Xander Spotbeen, Alexander Giesen, Charles T. A. Parker, Sinja Taavitsainen, Olli Hantula, Mikael Marttinen, Ismaïl Hermelo, Mazlina Ismail, Elise Midtbust, Maximilian Wess, Wout Devlies, Abhibhav Sharma, Sebastian Krossa, Tomi Häkkinen, Ebrahim Afyounian, Katy Vandereyken, Sam Kint, Juha Kesseli, Teemu Tolonen, Teuvo L. J. Tammela, Trond Viset, Øystein Størkersen, Guro F. Giskeødegård, Morten B. Rye, Teemu Murtola, Andrew Erickson, Leena Latonen, G. Steven Bova, Ian G. Mills, Steven Joniau, Johannes V. Swinnen, Thierry Voet, Tuomas Mirtti, Gerhardt Attard, Frank Claessens, Tapio Visakorpi, Kirsi J. Rautajoki, May-Britt Tessem, Alfonso Urbanucci, Matti Nykter

المصدر: Nature Communications, Vol 15, Iss 1, Pp 1-16 (2024)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/1ebb45b1d7aa49d7b63f03831144be68

المؤلفون: Riikka Nurminen, Ebrahim Afyounian, Niina Paunu, Riku Katainen, Mari Isomäki, Anssi Nurminen, Mauro Scaravilli, Jenni Tolppanen, Vidal Fey, Anni Kivinen, Pauli Helén, Niko Välimäki, Juha Kesseli, Lauri A. Aaltonen, Hannu Haapasalo, Matti Nykter, Kirsi J. Rautajoki

المصدر: Scientific Reports, Vol 14, Iss 1, Pp 1-12 (2024)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2045-2322

URL الوصول: https://doaj.org/article/3f05e1aae8db4dccab392f0bae132f55

المؤلفون: Leena Latonen, Ebrahim Afyounian, Antti Jylhä, Janika Nättinen, Ulla Aapola, Matti Annala, Kati K. Kivinummi, Teuvo T. L. Tammela, Roger W. Beuerman, Hannu Uusitalo, Matti Nykter, Tapio Visakorpi

المصدر: Nature Communications, Vol 9, Iss 1, Pp 1-13 (2018)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/61f749925834414ebb92c52acbc5d9a6

المؤلفون: Ebrahim Afyounian, Matti Annala, Matti Nykter

المصدر: BMC Bioinformatics, Vol 18, Iss 1, Pp 1-10 (2017)

مصطلحات موضوعية: Somatic copy number analysis, Loss of heterozygosity, Segmentation, Whole-genome sequencing, Cancer, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: http://link.springer.com/article/10.1186/s12859-017-1626-8; https://doaj.org/toc/1471-2105

URL الوصول: https://doaj.org/article/0363e9fdafdb44cd8f8443729afc584f

المؤلفون: Felix Krueger, Frankie James, Phil Ewels, Ebrahim Afyounian, Michael Weinstein, Benjamin Schuster-Boeckler, Gert Hulselmans, sclamons

Relation: https://github.com/FelixKrueger/TrimGalore/tree/0.6.8; https://doi.org/10.5281/zenodo.5127898; https://doi.org/10.5281/zenodo.7579519; oai:zenodo.org:7579519

الاتاحة: https://doi.org/10.5281/zenodo.7579519

المؤلفون: Felix Krueger, Frankie James, Phil Ewels, Ebrahim Afyounian, Michael Weinstein, Benjamin Schuster-Boeckler, Gert Hulselmans, sclamons

Relation: https://github.com/FelixKrueger/TrimGalore/tree/0.6.9; https://doi.org/10.5281/zenodo.5127898; https://doi.org/10.5281/zenodo.7581188; oai:zenodo.org:7581188

الاتاحة: https://doi.org/10.5281/zenodo.7581188

المؤلفون: Felix Krueger, Frankie James, Phil Ewels, Ebrahim Afyounian, Michael Weinstein, Benjamin Schuster-Boeckler, Gert Hulselmans, sclamons

Relation: https://github.com/FelixKrueger/TrimGalore/tree/0.6.10; https://doi.org/10.5281/zenodo.5127898; https://doi.org/10.5281/zenodo.7598955; oai:zenodo.org:7598955

الاتاحة: https://doi.org/10.5281/zenodo.7598955

المؤلفون: Meeri Pekkarinen, Kristiina Nordfors, Joonas Uusi-Mäkelä, Ville Kytölä, Minna Rauhala, Henna Urhonen, Laura Huhtala, Sergei Häyrynen, Ebrahim Afyounian, Olli Yli-Harja, Wei Zhang, Pauli Helen, Olli Lohi, Hannu Haapasalo, Joonas Haapasalo, Matti Nykter, Juha Kesseli, Kirsi J. Rautajoki

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::4e2cef75fb586a2de01dd728e0345d99
https://doi.org/10.1101/2022.03.14.483566

المؤلفون: Tuomo Virtanen, Ebrahim Afyounian, Riikka Nurminen, Teuvo Tammela, Tapio Visakorpi, Juha Kesseli, Kirsi Rautajoki, Matti Nykter

المصدر: Cancer Research. 83:4720-4720

مصطلحات موضوعية: Cancer Research, Oncology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::395ade1a48942535a3db7717350ed9a2
https://doi.org/10.1158/1538-7445.am2023-4720

المؤلفون: Antti Kiviaho, Heini M. Kallio, Sini K. Eerola, Elisa M. Vuorinen, Tomi Häkkinen, Sinja Taavitsainen, Ebrahim Afyounian, Teemu Tolonen, Juha Kesseli, Alfonso Urbanucci, Kirsi J. Rautajoki, Teuvo L. Tammela, Tapio Visakorpi, Matti Nykter

المصدر: Cancer Research. 83:5644-5644

مصطلحات موضوعية: Cancer Research, Oncology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::ec55c086978267b5fa64aee0f66d0c0d
https://doi.org/10.1158/1538-7445.am2023-5644

المؤلفون: Meeri Pekkarinen, Kristiina Nordfors, Joonas Uusi-Mäkelä, Ville Kytölä, Minna Rauhala, Henna Urhonen, Sergei Häyrynen, Ebrahim Afyounian, Olli Yli-Harja, Wei Zhang, Pauli Helen, Olli Lohi, Hannu Haapasalo, Joonas Haapasalo, Matti Nykter, Juha Kesseli, Kirsi Granberg

المصدر: Neuro-Oncology. 24:vii123-vii123

مصطلحات موضوعية: Cancer Research, Oncology, Neurology (clinical)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::05837fec13ee274cddfa1abf616937df
https://doi.org/10.1093/neuonc/noac209.468

المؤلفون: Leena Latonen, Teuvo L.J. Tammela, Tomi Häkkinen, Matti Annala, Francesco Tabaro, Kirsi J. Granberg, Tapio Visakorpi, Alessandro Lussana, Matti Nykter, Kati Kivinummi, Ebrahim Afyounian, Anastasia Shcherban, Alfonso Urbanucci, Juha Kesseli, Riikka Nurminen, Joonas Uusi-Makela

مصطلحات موضوعية: Regulation of gene expression, Transcriptome, Prostate cancer, DNA methylation, Cancer cell, Cancer research, medicine, Cancer, Biology, medicine.disease, Transcription factor, Chromatin

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::953154fe4da8f9af119c1196e5c13df2
https://doi.org/10.1101/2020.09.08.287268

المؤلفون: Felix Krueger, Frankie James, Phil Ewels, Ebrahim Afyounian, Benjamin Schuster-Boeckler

Relation: https://github.com/FelixKrueger/TrimGalore/tree/0.6.7; https://doi.org/10.5281/zenodo.5127898; https://doi.org/10.5281/zenodo.5127899; oai:zenodo.org:5127899

الاتاحة: https://doi.org/10.5281/zenodo.5127899

المؤلفون: Ebrahim Afyounian

Relation: https://github.com/eafyounian/academic-supervision-questionnaire/tree/v1.0.0; https://doi.org/10.5281/zenodo.3878738; https://doi.org/10.5281/zenodo.3878739; oai:zenodo.org:3878739

الاتاحة: https://doi.org/10.5281/zenodo.3878739

المؤلفون: Pauli Helén, Joonas Haapasalo, Kristiina Nordfors, Sergei Häyrynen, Joonas Tuominen, Hannu Haapasalo, Ville Kytölä, Meeri Pekkarinen, Olli Lohi, Juha Kesseli, Matti Nykter, Kirsi J. Granberg, Ebrahim Afyounian

المصدر: Cancer Research. 80:LB-173

مصطلحات موضوعية: Cancer Research, Oncology, DNA methylation, Neural differentiation, Epigenetics, Biology, Cell biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::eb7c83500feaf8ef4841c31677a01587
https://doi.org/10.1158/1538-7445.am2020-lb-173

المؤلفون: Mi Yang, Francesca Petralia, Zhi Li, Hongyang Li, Weiping Ma, Xiaoyu Song, Sunkyu Kim, Heewon Lee, Han Yu, Bora Lee, Seohui Bae, Eunji Heo, Jan Kaczmarczyk, Piotr Stępniak, Michał Warchoł, Thomas Yu, Anna P. Calinawan, Paul C. Boutros, Samuel H. Payne, Boris Reva, Emily Boja, Henry Rodriguez, Gustavo Stolovitzky, Yuanfang Guan, Jaewoo Kang, Pei Wang, David Fenyö, Julio Saez-Rodriguez, Tunde Aderinwale, Ebrahim Afyounian, Piyush Agrawal, Mehreen Ali, Alicia Amadoz, Francisco Azuaje, John Bachman, Sherry Bhalla, José Carbonell-Caballero, Priyanka Chakraborty, Kumardeep Chaudhary, Yonghwa Choi, Yoonjung Choi, Cankut Çubuk, Sandeep Kumar Dhanda, Joaquín Dopazo, Laura L. Elo, Ábel Fóthi, Olivier Gevaert, Kirsi Granberg, Russell Greiner, Marta R. Hidalgo, Vivek Jayaswal, Hwisang Jeon, Minji Jeon, Sunil V. Kalmady, Yasuhiro Kambara, Keunsoo Kang, Tony Kaoma, Harpreet Kaur, Hilal Kazan, Devishi Kesar, Juha Kesseli, Daehan Kim, Keonwoo Kim, Sang-Yoon Kim, Sajal Kumar, Yunpeng Liu, Roland Luethy, Swapnil Mahajan, Mehrad Mahmoudian, Arnaud Muller, Petr V. Nazarov, Hien Nguyen, Matti Nykter, Shujiro Okuda, Sungsoo Park, Gajendra Pal Singh Raghava, Jagath C. Rajapakse, Tommi Rantapero, Hobin Ryu, Francisco Salavert, Sohrab Saraei, Ruby Sharma, Ari Siitonen, Artem Sokolov, Kartik Subramanian, Veronika Suni, Tomi Suomi, Léon-Charles Tranchevent, Salman Sadullah Usmani, Tommi Välikangas, Roberto Vega, Hua Zhong

المصدر: Cell Systems. 11:186-195.e9

مصطلحات موضوعية: Male, Proteomics, Histology, Genomics, Computational biology, Biology, Pathology and Forensic Medicine, Machine Learning, Transcriptome, 03 medical and health sciences, 0302 clinical medicine, Neoplasms, medicine, Humans, Gene, 030304 developmental biology, 0303 health sciences, Proteins, Cancer, Cell Biology, Phosphoproteins, Proteogenomics, medicine.disease, Phosphoprotein, Crowdsourcing, Phosphorylation, Female, 030217 neurology & neurosurgery

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c65427c3ced4bcee8cfb3ec80c5c9547
https://doi.org/10.1016/j.cels.2020.06.013

المؤلفون: Kristiina Nordfors, Joonas Haapasalo, Ebrahim Afyounian, Joonas Tuominen, Matti Annala, Sergei Häyrynen, Ritva Karhu, Pauli Helén, Olli Lohi, Matti Nykter, Hannu Haapasalo, Kirsi J. Granberg

المصدر: Cold Spring Harbor Molecular Case Studies

مصطلحات موضوعية: General Medicine, Erratum

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b144a698efd7c4f9da6b675c0af74724
http://europepmc.org/articles/PMC5983177

المؤلفون: Mauro Scaravilli, Annika Kohvakka, Pekka Ruusuvuori, Ebrahim Afyounian, Matti Nykter, Tapio Visakorpi, Leena Latonen

المصدر: Cancer Research. 79:4393-4393

مصطلحات موضوعية: Cancer Research, Oncology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::df4b18b38054656eecdba4e6bb9b4f41
https://doi.org/10.1158/1538-7445.am2019-4393

المؤلفون: Teuvo L.J. Tammela, Kati Kivinummi, Tapio Visakorpi, Tomi Häkkinen, Matti Annala, Leena Latonen, Francesco Tabaro, Anastasia Shcherban, Kirsi J. Granberg, Joonas Tuominen, Matti Nykter, Juha Kesseli, Ebrahim Afyounian

المصدر: Cancer Research. 79:LB-096

مصطلحات موضوعية: Cancer Research, Context (language use), Biology, medicine.disease, Genome, Molecular biology, Chromatin, chemistry.chemical_compound, Prostate cancer, Differentially methylated regions, Oncology, chemistry, DNA methylation, medicine, Human genome, DNA

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::e5122682f01e1805ee00669ac6451446
https://doi.org/10.1158/1538-7445.am2019-lb-096

المؤلفون: Matti Nykter, Ebrahim Afyounian, Matti Annala

المساهمون: Lääketieteen ja biotieteiden tiedekunta - Faculty of Medicine and Life Sciences, University of Tampere

المصدر: BMC Bioinformatics
BMC Bioinformatics, Vol 18, Iss 1, Pp 1-10 (2017)

مصطلحات موضوعية: 0301 basic medicine, DNA Copy Number Variations, Copy number analysis, Biology, Astrocytoma, lcsh:Computer applications to medicine. Medical informatics, Biochemistry, Genome, Polymorphism, Single Nucleotide, DNA sequencing, Biokemia, solu- ja molekyylibiologia - Biochemistry, cell and molecular biology, Loss of heterozygosity, 03 medical and health sciences, Segmentation, Structural Biology, Syöpätaudit - Cancers, Humans, Computer Simulation, Tietojenkäsittely ja informaatiotieteet - Computer and information sciences, lcsh:QH301-705.5, Molecular Biology, Cancer, Genetics, Whole genome sequencing, Whole-genome sequencing, Applied Mathematics, Breakpoint, High-Throughput Nucleotide Sequencing, Glioma, Sequence Analysis, DNA, Isocitrate Dehydrogenase, Somatic copy number analysis, 3. Good health, Computer Science Applications, 030104 developmental biology, lcsh:Biology (General), Chromosomes, Human, Pair 1, lcsh:R858-859.7, DNA microarray, Chromosome Deletion, Software, SNP array, Chromosomes, Human, Pair 17, Genome-Wide Association Study

وصف الملف: fulltext

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::21700ea7a6305a4c1176396bd96639f3
https://pubmed.ncbi.nlm.nih.gov/28407731