المؤلفون: I. D. Busov, M. A. Genaev, E. G. Komyshev, V. S. Koval, T. E. Zykova, A. Y. Glagoleva, D. A. Afonnikov

المصدر: Вавиловский журнал генетики и селекции, Vol 28, Iss 4, Pp 443-455 (2024)

مصطلحات موضوعية: hyperspectral images, machine learning, statistical analysis, barley grains, pigment composition, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/4187; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/9e66e51ab9d04ebdb291e0fe935d8873

المؤلفون: E. G. Komyshev, M. A. Genaev, I. D. Busov, M. V. Kozhekin, N. V. Artemenko, A. Y. Glagoleva, V. S. Koval, D. A. Afonnikov

المصدر: Вавиловский журнал генетики и селекции, Vol 27, Iss 7, Pp 859-868 (2023)

مصطلحات موضوعية: digital image analysis, machine learning, barley grains, pigment composition, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/3986; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/73359226eb7a42769048db01ea8d35e6

المؤلفون: A. Yu. Pronozin, A. A. Paulish, E. A. Zavarzin, A. Yu. Prikhodko, N. M. Prokhoshin, Yu. V. Kruchinina, N. P. Goncharov, E. G. Komyshev, M. A. Genaev

المصدر: Вавиловский журнал генетики и селекции, Vol 25, Iss 1, Pp 71-81 (2021)

مصطلحات موضوعية: wheat spike morphology, wheat, phenomics, image processing, computer vision, machine learning, biotechnology, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/2918; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/d2f6f896a04c42a4a2256b4895636b95

المؤلفون: E. G. Komyshev, M. A. Genaev, D. A. Afonnikov

المصدر: Вавиловский журнал генетики и селекции, Vol 24, Iss 4, Pp 340-347 (2020)

مصطلحات موضوعية: color, texture, digital images, image analysis, cereal grains, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/2642; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/d3b203baf7d8414b988f92919ffe2cbd

المؤلفون: V. V. Alt, T. A. Gurova, O. V. Elkin, D. N. Klimenko, L. V. Maximov, I. A. Pestunov, O. A. Dubrovskaya, M. A. Genaev, T. V. Erst, K. A. Genaev, E. G. Komyshev, V. K. Khlestkin, D. А. Afonnikov

المصدر: Вавиловский журнал генетики и селекции, Vol 24, Iss 3, Pp 259-266 (2020)

مصطلحات موضوعية: hyperspectral data, spectral characteristics of plants, wheat diseases, root rot, potato pulp, chlorophyll, vegetation indices, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/2593; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/698b92201a674874b86ca2420e854a61

المؤلفون: K. A. Ivanova, E. G. Komyshev, M. A. Genaev, A. A. Egorova, K. A. Koloshina, N. A. Chalaya, D. A. Afonnikov, A. V. Kochetov, E. V. Rogozina, S. V. Gerasimova

المصدر: Вавиловский журнал генетики и селекции, Vol 23, Iss 5, Pp 519-526 (2019)

مصطلحات موضوعية: solanum, petota, digital phenotyping of plants, wild potato species, seedcounter, tuberization, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/1999; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/bffb9997114a4cb58c8682ca9d6337fe

المؤلفون: S. A. Lashin, D. A. Afonnikov, M. A. Genaev, F. V. Kazantsev, E. G. Komyshev, E. A. Oschepkova, А. V. Petrov, D. A. Rasskazov, A. A. Smirnova, N. A. Kolchanov

المصدر: Вавиловский журнал генетики и селекции, Vol 22, Iss 3, Pp 386-393 (2018)

مصطلحات موضوعية: database, informational portal, bioresource collection (brc), Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/1520; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/0ae0da6534ba443798c1ea8ec853f952

المؤلفون: M. A. Genaev, E. G. Komyshev, Fu Hao, V. S. Koval, N. P. Goncharov, D. A. Afonnikov

المصدر: Вавиловский журнал генетики и селекции, Vol 22, Iss 1, Pp 132-140 (2018)

مصطلحات موضوعية: wheat, spike characteristics, phenotyping, annotation, data integration, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/1373; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/f8fb30e802f647eb98fd025d49f61a09

المؤلفون: E. G. Komyshev, M. A. Genaev, K. V. Gunbin, D. A. Afonnikov

المصدر: Вавиловский журнал генетики и селекции, Vol 17, Iss 4/1, Pp 607-614 (2015)

مصطلحات موضوعية: biouniwa, unification of access, data integration, pipelined data processing, descriptions of computational modules, web interface, web services, bioinformatics, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/184; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/dfb7479fed784e56b54b57650e2aeec6

المؤلفون: M. A. Genaev, E. G. Komyshev, K. V. Gunbin, D. A. Afonnikov

المصدر: Вавиловский журнал генетики и селекции, Vol 16, Iss 4/1, Pp 849-857 (2014)

مصطلحات موضوعية: bioinformatics, data integration, workflow data processing, data metadescription, web interface, web service, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://vavilov.elpub.ru/jour/article/view/83; https://doaj.org/toc/2500-3259

URL الوصول: https://doaj.org/article/25297d690d5d48049f94d335fd49ad72

المؤلفون: E. G. Komyshev, M. A. Genaev, K. V. Gunbin, D. A. Afonnikov, Е. Г. Комышев, М. А. Генаев, К. В. Гунбин, Д. А. Афонников

المساهمون: СО РАН, РФФИ, РАН, программа поддержки ведущих научных школ НШ-5278.2012.4

المصدر: Vavilov Journal of Genetics and Breeding; Том 17, № 4/1 (2013); 607-614 ; Вавиловский журнал генетики и селекции; Том 17, № 4/1 (2013); 607-614 ; 2500-3259

مصطلحات موضوعية: биоинформатика, unification of access, data integration, pipelined data processing, descriptions of computational modules, web interface, web services, bioinformatics, унификация доступа, интеграция данных, конвейерная обработка данных, описание вычислительных модулей, Web-интерфейс, Web-сервис

وصف الملف: application/pdf

Relation: https://vavilov.elpub.ru/jour/article/view/184/186; Генаев М.А., Комышев Е.Г., Гунбин К.В., Афонников Д.А. BioInfoWF – система автоматической генерации Web-интерфейсов и Web-сервисов для биоинформационных исследований // Вавилов. журн. генет. и селекции. 2012. Т. 16. № 4/1. С. 849–857.; Aloisio G., Cafaro M., Fiore S., Mirto M. A WorkFlow management system for bioinformatics grid // Proc. of the Network Tools and Applications in Biology (NETTAB) Workshops, Naples, Italy, 2005.; Apache Software Foundation, Apache Tomcat. 2013. http:// tomcat.apache.org; Bray T., Paoli J., Sperberg-McQueen C.M. et al. Extensible Markup Language (XML) (2006). Available at: www. w3.org/TR/xml.; Cerami E. Web services essentials: distributed applications with XML-RPC, SOAP, UDDI and WSDL. O’Reilly Media, Inc., 2002.; Christensen E., Curbera F., Meredith G., Weerawarana S. Web services description language (WSDL) 1.1. 2001. http://www.w3.org/TR/wsdl; Deelman E., Gannon D., Shields M., Taylor I. Workflows and e-Science: An overview of workflow system features and capabilities // Future Generation Computer Systems. 2009. V. 25. Nо. 5. P. 528–540.; Erl T. Service-oriented architecture. Englewood Cliffs: Prentice Hall, 2004.; Fielding R., Gettys J., Mogul J. et al. Hypertext transfer protocol–HTTP/1.1. 1999.; Free Software Foundation, Inc., GNU General Public License, 2007. http://www.gnu.org/licenses/gpl.html; Goecks J., Nekrutenko A., Taylor J. Galaxy a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences // Genome Biol. 2010. V. 11. No. 8. Р. R86.; Gudgin M., Hadley M., Moreau J. et al. Simple Object Access Protocol (SOAP) 1.2. W3C, 2003.; Gunbin K.V., Suslov V.V., Genaev M.A., Afonnikov D.A. Computer system for analysis of molecular evolution modes (SAMEM): analysis of molecular evolution modes at deep inner branches of the phylogenetic tree // In Silico Biol. 2012. V. 11. No. 3. P. 109–123.; Hull D., Wolstencroft K., Stevens R. et al. Taverna: a tool for building and running workflows of services // Nucl. Acids Res. 2006. V. 34. Suppl. 2. W729–W732.; Kawashima S., Katayama T., Sato Y., Kanehisa M. KEGG API: A web service using SOAP/WSDL to access the KEGG system // Genome Inform. Ser. 2003. P. 673–674.; Pautasso C., Zimmermann O., Leymann F. Restful web services vs. big’web services: making the right architectural decision // Proc. 17th Intern. Conf. on World Wide Web. ACM, 2008. P. 805–814.; Postel J., Reynolds J. File transfer protocol. 1985., available at http://tools.ietf.org/html/rfc959; Postel J. Simple mail transfer protocol // Inform. Sci. 1982.; Richardson L., Ruby S. RESTful web services. O’Reilly, 2008.; https://vavilov.elpub.ru/jour/article/view/184

الاتاحة: https://vavilov.elpub.ru/jour/article/view/184

المؤلفون: Dmitry A. Afonnikov, E. G. Komyshev, Mikhail A. Genaev

المصدر: Vavilov Journal of Genetics and Breeding
Vavilovskij Žurnal Genetiki i Selekcii, Vol 24, Iss 4, Pp 340-347 (2020)

مصطلحات موضوعية: 0106 biological sciences, цифровые изображения, digital images, Review, Biology, QH426-470, 01 natural sciences, Texture (geology), General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, Pigment, Digital image, зерна злаков, image analysis, Genetics, Color formation, 030304 developmental biology, 0303 health sciences, Moisture absorption, текстура, Hyperspectral imaging, food and beverages, Plant phenotyping, color, цвет, анализ изображений, cereal grains, Feature (computer vision), visual_art, visual_art.visual_art_medium, General Agricultural and Biological Sciences, Biological system, texture, 010606 plant biology & botany

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bc83b5b7267255d65f4e1f9f4e54dbde
https://pubmed.ncbi.nlm.nih.gov/33659816

المؤلفون: M. A. Genaev, E. G. Komyshev, K. V. Gunbin, D. A. Afonnikov, М. А. Генаев, Е. Г. Комышев, К. В. Гунбин, Д. А. Афонников

المساهمون: Министерство образования и науки РФ

المصدر: Vavilov Journal of Genetics and Breeding; Том 16, № 4/1 (2012); 849-857 ; Вавиловский журнал генетики и селекции; Том 16, № 4/1 (2012); 849-857 ; 2500-3259 ; 2500-0462

مصطلحات موضوعية: Web-сервис, data integration, workflow data processing, data metadescription, Web interface, Web service, интеграция данных, конвейерная обработка данных, метаописание данных, Web-интерфейс

وصف الملف: application/pdf

Relation: https://vavilov.elpub.ru/jour/article/view/83/84; Гунбин К.В., Генаев М.А., Турнаев И.И., Афонников Д.А. Компьютерная система анализа режимов молекулярной эволюции генов и белков: анализ эволюции циклинов B // Вестн. Томского гос. ун-та. Биология. 2011. 4. С. 175–189.; Bhagat J., Tanoh F., Nzuobontane E. et al. BioCatalogue: a universal catalogue of Web services for the life sciences // Nucl. Acids Res. 2010. V. 38. Р. 689–694.; Deelman E., Gannon D., Shields M., Taylor I. Workfl ows and e-Science: An overview of workfl ow system features and capabilities // Future Generation Computer Systems. 2009. V. 25. Р. 528–540.; Dereeper A., Guignon V., Blanc G. et al. Phylogeny.fr: robust phylogenetic analysis for the non-specialist // Nucl. Acids Res. 2008. V. 36. Р. 465–469.; Fernald G.H., Capriotti E., Daneshjou R. et al. Bioinformatics challenges for personalized medicine // Bioinformatics. 2011. V. 27. Р. 1741–1748.; Goble C.A., Bhagat J., Aleksejevs S. et al. myExperiment: a repository and social network for the sharing of bioinformatics workfl ows // Nucl. Acids Res. 2010. V. 38. Р. 677–682.; Goecks J., Nekrutenko A., Taylor J., Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences // Genome Biol. 2010. 11:R86.; Gunbin K.V., Suslov V.V., Genaev M.A., Afonnikov D.A. Computer system for analysis of molecular evolution modes (SAMEM): analysis of molecular evolution modes at deep inner branches of the phylogenetic tree // In Silico Biol. 2012. In press.; Gunbin K.V., Suslov V.V., Turnaev I.I. et al. Molecular evolution of cyclin proteins in animals and fungi // BMC Evol. Biol. 2011. V. 11. P. 224.; Hartmann A., Czauderna T., Hoffmann R. et al. HTPheno: an image analysis pipeline for high-throughput plant phenotyping // BMC Bioinformatics. 2011. V. 12. P. 148.; Moore J.H., Asselbergs F.W., Williams S.M. Bioinformatics challenges for genome-wide association studies // Bioinformatics. 2010. V. 26. Р. 445–455.; Oinn T., Addis M., Ferris J. et al. Taverna: a tool for the composition and enactment of bioinformatics workfl ows // Bioinformatics. 2004. V. 20. Р. 3045–3054.; Pop M., Salzberg S.L. Bioinformatics challenges of new sequencing technology // Trends Genet. 2008. V. 24. Р. 142–149.; Pupko T., Pe’er I., Hasegawa M. et al. A branch-and-bound algorithm for the inference of ancestral amino-acid sequences when the replacement rate varies among sites: Application to the evolution of fi ve gene families // Bioinformatics. 2002. V. 18. Р. 1116–1123.; Sánchez R., Serra F., Tárraga J. et al. Phylemon 2.0: a suite of Web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing // Nucl. Acids Res. 2011. V. 39. Р. 470–474.; Smith N.G. Are radical and conservative substitution rates useful statistics in molecular evolution? // J. Mol. Evol. 2003. V. 57. Р. 467–478.; Zhang J. Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes // J. Mol. Evol. 2000. V. 50. Nо. 1. P. 56–68.; https://vavilov.elpub.ru/jour/article/view/83

الاتاحة: https://vavilov.elpub.ru/jour/article/view/83

المؤلفون: Evgenia K. Karpova, N. V. Adonyeva, E. G. Komyshev, N. E. Gruntenko, M. A. Genaev, M. A. Eremina, Dmitry A. Afonnikov

المصدر: Biology Open, Vol 9, Iss 10 (2020)
Biology Open
article-version (VoR) Version of Record

مصطلحات موضوعية: 0106 biological sciences, QH301-705.5, fecundity, Science, Real-time computing, 01 natural sciences, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, image analysis, Animals, Biology (General), Drosophila, 030304 developmental biology, 0303 health sciences, biology, business.industry, Methods & Techniques, Reproduction, fungi, Mobile apps, Reproducibility of Results, object detection, drosophila, biology.organism_classification, Automation, Mobile Applications, Object detection, Fertility, Android application, Female, android application, Smartphone, General Agricultural and Biological Sciences, business, Mobile device, 010606 plant biology & botany

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ddd4a2e4061d6543b6e1b4982b7b9c14
http://bio.biologists.org/content/9/10/bio054452

المؤلفون: A. A. Smirnova, Sergey A. Lashin, M. A. Genaev, Nikolay A. Kolchanov, E. G. Komyshev, Fedor V. Kazantsev, Dmitry A. Afonnikov, E. A. Oschepkova, А. V. Petrov, D. A. Rasskazov

المصدر: Vavilovskij Žurnal Genetiki i Selekcii, Vol 22, Iss 3, Pp 386-393 (2018)

مصطلحات موضوعية: informational portal, Integrated information system, bioresource collection (brc), Genetics, Biology, QH426-470, General Agricultural and Biological Sciences, Data science, General Biochemistry, Genetics and Molecular Biology, database

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6592e876afa4aaa35b300a579aa2e00a
https://vavilov.elpub.ru/jour/article/view/1520

المؤلفون: Dmitry A. Afonnikov, E. G. Komyshev, Nikolai V. Smirnov, Yuliya V. Kruchinina, N. P. Goncharov, Mikhail A. Genaev

المصدر: Agronomy
Volume 9
Issue 7
Agronomy, Vol 9, Iss 7, p 390 (2019)

مصطلحات موضوعية: 0106 biological sciences, 2d images, Mean squared error, algorithms, 01 natural sciences, computer vision, lcsh:Agriculture, 03 medical and health sciences, Digital image, agricultural_sciences_agronomy, image analysis, Projection (set theory), 030304 developmental biology, Mathematics, 0303 health sciences, business.industry, Spike density, lcsh:S, Pattern recognition, plant_sciences, machine learning, Pattern recognition (psychology), Digital image analysis, Spike (software development), Artificial intelligence, business, Agronomy and Crop Science, 010606 plant biology & botany

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f236e132a94c3a0b3233b306f7c54918
https://doi.org/10.20944/preprints201903.0091.v1

المؤلفون: Tatyana A. Pshenichnikova, E. G. Komyshev, A. V. Doroshkov, Mikhail A. Genaev, Dmitry A. Afonnikov

المصدر: Russian Journal of Genetics. 52:688-701

مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, Biological data, business.industry, Process (engineering), Scale (chemistry), Biology, 01 natural sciences, Automation, Field (computer science), Biotechnology, 03 medical and health sciences, 030104 developmental biology, Phenomics, Informatics, Genetics, Biochemical engineering, business, Throughput (business), 010606 plant biology & botany

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::636c6def6d39b78d7f053d2910874b12
https://doi.org/10.1134/s1022795416070024

المؤلفون: E. G. Komyshev, M. A. Genaev, Dmitry A. Afonnikov

المصدر: Frontiers in Plant Science

مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, Wheat grain, wheat grain, phenotyping, Computer science, Real-time computing, Plant Science, 01 natural sciences, Field (computer science), Grain size, Operational system, 03 medical and health sciences, mobile devices, 030104 developmental biology, Android, computer image analysis, Android (operating system), Mobile device, Simulation, 010606 plant biology & botany, Original Research

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b001568a13e0562c8fd11898e59d8a3f
http://europepmc.org/articles/PMC5209368