المؤلفون: Matthew F Wipperman, Allen Z Lin, Kaitlyn M Gayvert, Benjamin Lahner, Selin Somersan-Karakaya, Xuefang Wu, Joseph Im, Minji Lee, Bharatkumar Koyani, Ian Setliff, Malika Thakur, Daoyu Duan, Aurora Breazna, Fang Wang, Wei Keat Lim, Gabor Halasz, Jacek Urbanek, Yamini Patel, Gurinder S Atwal, Jennifer D Hamilton, Samuel Stuart, Oren Levy, Andreja Avbersek, Rinol Alaj, Sara C Hamon, Olivier Harari

المصدر: eLife, Vol 13 (2024)

مصطلحات موضوعية: digital health technology, wearables, gait, neuroscience, data analysis, clinical AI/ML, Medicine, Science, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://elifesciences.org/articles/86132; https://doaj.org/toc/2050-084X

URL الوصول: https://doaj.org/article/ad3bab55efd74d5882a3db592d2a1711

المؤلفون: Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

المصدر: PLoS Computational Biology, Vol 20, Iss 2, p e1011875 (2024)

مصطلحات موضوعية: Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011875&type=printable; https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

URL الوصول: https://doaj.org/article/da5ae20e7b974b2ab7cbc1bd6a06ceab

المؤلفون: Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

مصطلحات موضوعية: Biotechnology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, studying rna methylations, still currently unavailable, realistic simulator module, make several decisions, integrate two modules, increasingly popular choice, div >< p, basal expression ranges, proper statistical power, power evaluation method, power assessment module, epitranscriptome studies using, real pilot data, ), researchers need, sequencing data based, 6 , real data, power calculation, sequencing data, study epitranscriptome, magpie <, sequencing measurements, sequencing depth, throughput nature, study design, sample size

Relation: https://figshare.com/articles/journal_contribution/Simulation_settings_and_additional_results_/25208705

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011875.s001
https://figshare.com/articles/journal_contribution/Simulation_settings_and_additional_results_/25208705

المؤلفون: Daoyu Duan

الاتاحة: https://dx.doi.org/10.18129/b9.bioc.mist
https://bioconductor.org/packages/mist

المؤلفون: Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

مصطلحات موضوعية: Biotechnology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, studying rna methylations, still currently unavailable, realistic simulator module, make several decisions, integrate two modules, increasingly popular choice, div >< p, basal expression ranges, proper statistical power, power evaluation method, power assessment module, epitranscriptome studies using, real pilot data, ), researchers need, sequencing data based, 6 , real data, power calculation, sequencing data, study epitranscriptome, magpie <, sequencing measurements, sequencing depth, throughput nature, study design, sample size

Relation: https://figshare.com/articles/figure/Comparing_power_evaluation_results_between_major_DMR_detection_methods_TRESS_A_-_B_and_exomePeak2_C_-_D_/25208717

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011875.g004
https://figshare.com/articles/figure/Comparing_power_evaluation_results_between_major_DMR_detection_methods_TRESS_A_-_B_and_exomePeak2_C_-_D_/25208717

المؤلفون: Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

مصطلحات موضوعية: Biotechnology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, studying rna methylations, still currently unavailable, realistic simulator module, make several decisions, integrate two modules, increasingly popular choice, div >< p, basal expression ranges, proper statistical power, power evaluation method, power assessment module, epitranscriptome studies using, real pilot data, ), researchers need, sequencing data based, 6 , real data, power calculation, sequencing data, study epitranscriptome, magpie <, sequencing measurements, sequencing depth, throughput nature, study design, sample size

Relation: https://figshare.com/articles/figure/Statistical_power_evaluation_metrics_for_DMR_detection_at_various_sample_sizes_and_FDR_thresholds_/25208711

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011875.g002
https://figshare.com/articles/figure/Statistical_power_evaluation_metrics_for_DMR_detection_at_various_sample_sizes_and_FDR_thresholds_/25208711

المؤلفون: Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

مصطلحات موضوعية: Biotechnology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, studying rna methylations, still currently unavailable, realistic simulator module, make several decisions, integrate two modules, increasingly popular choice, div >< p, basal expression ranges, proper statistical power, power evaluation method, power assessment module, epitranscriptome studies using, real pilot data, ), researchers need, sequencing data based, 6 , real data, power calculation, sequencing data, study epitranscriptome, magpie <, sequencing measurements, sequencing depth, throughput nature, study design, sample size

Relation: https://figshare.com/articles/figure/Targeted_power_and_FDC_stratified_by_mean_input_values_for_DMRs_with_i_i_2_/25208714

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011875.g003
https://figshare.com/articles/figure/Targeted_power_and_FDC_stratified_by_mean_input_values_for_DMRs_with_i_i_2_/25208714

المؤلفون: Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

مصطلحات موضوعية: Biotechnology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, studying rna methylations, still currently unavailable, realistic simulator module, make several decisions, integrate two modules, increasingly popular choice, div >< p, basal expression ranges, proper statistical power, power evaluation method, power assessment module, epitranscriptome studies using, real pilot data, ), researchers need, sequencing data based, 6 , real data, power calculation, sequencing data, study epitranscriptome, magpie <, sequencing measurements, sequencing depth, throughput nature, study design, sample size

Relation: https://figshare.com/articles/figure/Overview_of_i_magpie_i_/25208708

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011875.g001
https://figshare.com/articles/figure/Overview_of_i_magpie_i_/25208708

المؤلفون: Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

مصطلحات موضوعية: Biotechnology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, studying rna methylations, still currently unavailable, realistic simulator module, make several decisions, integrate two modules, increasingly popular choice, div >< p, basal expression ranges, proper statistical power, power evaluation method, power assessment module, epitranscriptome studies using, real pilot data, ), researchers need, sequencing data based, 6 , real data, power calculation, sequencing data, study epitranscriptome, magpie <, sequencing measurements, sequencing depth, throughput nature, study design, sample size

Relation: https://figshare.com/articles/figure/Sequencing_depth_affects_targeted_power_and_FDC_for_DMRs_with_i_i_2_/25208720

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011875.g005
https://figshare.com/articles/figure/Sequencing_depth_affects_targeted_power_and_FDC_for_DMRs_with_i_i_2_/25208720

المؤلفون: Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

مصطلحات موضوعية: Biotechnology, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, studying rna methylations, still currently unavailable, realistic simulator module, make several decisions, integrate two modules, increasingly popular choice, div >< p, basal expression ranges, proper statistical power, power evaluation method, power assessment module, epitranscriptome studies using, real pilot data, ), researchers need, sequencing data based, 6 , real data, power calculation, sequencing data, study epitranscriptome, magpie <, sequencing measurements, sequencing depth, throughput nature, study design, sample size

Relation: https://figshare.com/articles/dataset/The_confusion_matrix_in_m_sup_6_sup_A_DMR_detection_when_taking_biological_significance_into_consideration_/25208723

الاتاحة: https://doi.org/10.1371/journal.pcbi.1011875.t001

المؤلفون: Daoyu Duan, Wen Tang, Runshu Wang, Zhenxing Guo, Hao Feng

المصدر: Briefings in Bioinformatics. 24

مصطلحات موضوعية: Molecular Biology, Information Systems

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::d17f6814c0a54e8aab23c4045e3cffa1
https://doi.org/10.1093/bib/bbad139

المؤلفون: Matthew F. Wipperman, Allen Z. Lin, Kaitlyn M. Gayvert, Benjamin Lahner, Selin Somersan-Karakaya, Xuefang Wu, Joseph Im, Minji Lee, Bharatkumar Koyani, Ian Setliff, Malika Thakur, Daoyu Duan, Aurora Breazna, Fang Wang, Wei Keat Lim, Gabor Halasz, Jacek Urbanek, Yamini Patel, Gurinder S. Atwal, Jennifer D. Hamilton, Clotilde Huyghues-Despointes, Oren Levy, Andreja Avbersek, Rinol Alaj, Sara C. Hamon, Olivier Harari

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::62e554d0d68138655ca076315e09f685
https://doi.org/10.1101/2022.10.05.22280750

المؤلفون: Daoyu Duan, Sijia He, Emina Huang, Ziyi Li, Hao Feng

المصدر: Bioinformatics

مصطلحات موضوعية: Statistics and Probability, Applications Note, Computational Mathematics, Computational Theory and Mathematics, Molecular Biology, Biochemistry, Computer Science Applications

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a9e9f332111ac79dde3b55247beab76e
https://doi.org/10.1093/bioinformatics/btac108

المؤلفون: Jon E. Peterson, Daoyu Duan, Yan G. Ni, Connie Wang, Chad Ray, John Allinson, Martha Hokom, Sara Hamon, Joel A Mathews, Xuemei Zhao, Greta Wegner

المصدر: The AAPS Journal. 22

مصطلحات موضوعية: Blood Platelets, Analyte, Protein biomarkers, Chemistry, Sample (material), Anticoagulants, Reproducibility of Results, Pharmaceutical Science, Blood Proteins, Computational biology, 030226 pharmacology & pharmacy, Biomarkers, Pharmacological, Protein markers, 03 medical and health sciences, 0302 clinical medicine, Drug development, Predictive Value of Tests, 030220 oncology & carcinogenesis, Immune Cell Activation, Leukocytes, Animals, Humans, Biomarker (medicine), Blood Chemical Analysis, Selection (genetic algorithm)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fdce6a10ec70389b5df9991c05696256
https://doi.org/10.1208/s12248-020-0412-0