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1Academic Journal
المؤلفون: Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R, Lee, Alexandra J, Kacsoh, Balint Z, Crocker, Alex W, Lewis, Kimberley A, Georghiou, George, Nguyen, Huy N, Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S, Dalkıran, Alperen, Cetin Atalay, Rengul, Zhang, Chengxin, Hurto, Rebecca L, Freddolino, Peter L, Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernández, José M, Gemovic, Branislava, Perovic, Vladimir R, Davidović, Radoslav S, Sumonja, Neven, Veljkovic, Nevena, Asgari, Ehsaneddin, Mofrad, Mohammad RK, Profiti, Giuseppe, Savojardo, Castrense, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Kahanda, Indika, Thurlby, Natalie, McHardy, Alice C, Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex A, Antczak, Magdalena, Fabris, Fabio, Wass, Mark N, Hou, Jie, Cheng, Jianlin, Wang, Zheng, Romero, Alfonso E, Paccanaro, Alberto, Yang, Haixuan, Goldberg, Tatyana, Zhao, Chenguang, Holm, Liisa, Törönen, Petri, Medlar, Alan J, Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Chi, Po-Han, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter W, Dessimoz, Christophe, Vidulin, Vedrana, Dzeroski, Saso, Sillitoe, Ian, Das, Sayoni, Lees, Jonathan Gill, Jones, David T, Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Warwick Vesztrocy, Alex, Rodriguez, Jose Manuel, Tress, Michael L, Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel B, Reeb, Jonas, Ritchie, David W, Aridhi, Sabeur, Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Koo, Da Chen Emily, Bonneau, Richard, Gligorijević, Vladimir, Barot, Meet, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico
المصدر: Genome Biology. 20(1)
مصطلحات موضوعية: Human Genome, Networking and Information Technology R&D (NITRD), Genetics, Generic health relevance, Animals, Biofilms, Candida albicans, Drosophila melanogaster, Genome, Bacterial, Genome, Fungal, Humans, Locomotion, Memory, Long-Term, Molecular Sequence Annotation, Pseudomonas aeruginosa, Protein function prediction, Long-term memory, Biofilm, Critical assessment, Community challenge, Environmental Sciences, Biological Sciences, Information and Computing Sciences, Bioinformatics
وصف الملف: application/pdf
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2Academic Journal
المؤلفون: Demers, Elora G, Biermann, Amy R, Masonjones, Sawyer, Crocker, Alex W, Ashare, Alix, Stajich, Jason E, Hogan, Deborah A
المصدر: Proceedings of the National Academy of Sciences of the United States of America. 115(47)
مصطلحات موضوعية: Biological Sciences, Biomedical and Clinical Sciences, Microbiology, Clinical Sciences, Medical Microbiology, Infectious Diseases, Antimicrobial Resistance, Lung, Biodefense, Genetics, Emerging Infectious Diseases, 2.2 Factors relating to the physical environment, 2.1 Biological and endogenous factors, Infection, Alleles, Antifungal Agents, Candida, Candidiasis, Chronic Disease, Cystic Fibrosis, Drug Resistance, Fungal, Drug Resistance, Microbial, Female, Fluconazole, Humans, Microbial Sensitivity Tests, Mutation, Retrospective Studies, Transcription Factors, drug resistance, evolution, fungi, heterogeneity
وصف الملف: application/pdf
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3Academic Journal
المؤلفون: Byrd, Samuel E., Hoyt, Brianna, Ozersky, Sydney A., Crocker, Alex W., Habenicht, Daniel, Nester, Mattie R., Prowse, Heather, Turkal, Claire E., Joseph, Lauren, Duina, Andrea A.
المصدر: BMC Research Notes; 8/6/2024, Vol. 17 Issue 1, p1-7, 7p
مصطلحات موضوعية: RNA polymerase II, GENE expression, GENETIC transcription, DNA sequencing, ALLELES
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4Academic Journal
المؤلفون: Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R., Lee, Alexandra J., Kacsoh, Balint Z., Crocker, Alex W., Lewis, Kimberley A., Georghiou, George, Nguyen, Huy N., Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S., Dalkiran, Alperen, Atalay, Rengul Cetin, Zhang, Chengxin, Hurto, Rebecca L., Freddolino, Peter L., Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernandez, Jose M., Gemovic, Branislava, Perovic, Vladimir R., Davidovic, Radoslav S., Sumonja, Neven, Veljkovic, Nevena, Asgari, Ehsaneddin, Mofrad, Mohammad R. K., Profiti, Giuseppe, Savojardo, Castrense, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Kahanda, Indika, Thurlby, Natalie, McHardy, Alice C., Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex A., Antczak, Magdalena, Fabris, Fabio, Wass, Mark N., Hou, Jie, Cheng, Jianlin, Wang, Zheng, Romero, Alfonso E., Paccanaro, Alberto, Yang, Haixuan, Goldberg, Tatyana, Zhao, Chenguang, Holm, Liisa, Törönen, Petri, Medlar, Alan J., Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Chi, Po-Han, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter W., Dessimoz, Christophe, Vidulin, Vedrana, Dzeroski, Saso, Sillitoe, Ian, Das, Sayoni, Lees, Jonathan Gill, Jones, David T., Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Vesztrocy, Alex Warwick, Rodriguez, Jose Manuel, Tress, Michael L., Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel B., Reeb, Jonas, Ritchie, David W., Aridhi, Sabeur, Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Koo, Da Chen Emily, Bonneau, Richard, Gligorijevic, Vladimir, Barot, Meet, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico, Falda, Marco, Berselli, Michele, Tosatto, Silvio C. E., Carraro, Marco, Piovesan, Damiano, Rehman, Hafeez Ur, Mao, Qizhong, Zhang, Shanshan, Vucetic, Slobodan, Black, Gage S., Jo, Dane, Suh, Erica, Dayton, Jonathan B., Larsen, Dallas J., Omdahl, Ashton R., McGuffin, Liam J., Brackenridge, Danielle A., Babbitt, Patricia C., Yunes, Jeffrey M., Fontana, Paolo, Zhang, Feng, Zhu, Shanfeng, You, Ronghui, Zhang, Zihan, Dai, Suyang, Yao, Shuwei, Tian, Weidong, Cao, Renzhi, Chandler, Caleb, Amezola, Miguel, Johnson, Devon, Chang, Jia-Ming, Liao, Wen-Hung, Liu, Yi-Wei, Pascarelli, Stefano, Frank, Yotam, Hoehndorf, Robert, Kulmanov, Maxat, Boudellioua, Imane, Politano, Gianfranco, Di Carlo, Stefano, Benso, Alfredo, Hakala, Kai, Ginter, Filip, Mehryary, Farrokh, Kaewphan, Suwisa, Bjorne, Jari, Moen, Hans, Tolvanen, Martti E. E., Salakoski, Tapio, Kihara, Daisuke, Jain, Aashish, Smuc, Tomislav, Altenhoff, Adrian, Ben-Hur, Asa, Rost, Burkhard, Brenner, Steven E., Orengo, Christine A., Jeffery, Constance J., Bosco, Giovanni, Hogan, Deborah A., Martin, Maria J., O'Donovan, Claire, Mooney, Sean D., Greene, Casey S., Radivojac, Predrag, Friedberg, Iddo
المساهمون: Computational genomics, Institute of Biotechnology, Bioinformatics, Genetics, Helsinki Institute of Life Science HiLIFE, Discovery Research Group/Prof. Hannu Toivonen
مصطلحات موضوعية: Protein function prediction, Long-term memory, Biofilm, Critical assessment, Community challenge, CANDIDA-ALBICANS, ONTOLOGY, IDENTIFICATION, GENERATION, LIBRARY, Medical biotechnology
وصف الملف: application/pdf
Relation: The work of IF was funded, in part, by the National Science Foundation award DBI-1458359. The work of CSG and AJL was funded, in part, by the National Science Foundation award DBI-1458390 and GBMF 4552 from the Gordon and Betty Moore Foundation. The work of DAH and KAL was funded, in part, by the National Science Foundation award DBI-1458390, National Institutes of Health NIGMS P20 GM113132, and the Cystic Fibrosis Foundation CFRDP STANTO19R0. The work of AP, HY, AR, and MT was funded by BBSRC grants BB/K004131/1, BB/F00964X/1 and BB/M025047/1, Consejo Nacional de Ciencia y Tecnologia Paraguay (CONACyT) grants 14-INV-088 and PINV15-315, and NSF Advances in BioInformatics grant 1660648. The work of JC was partially supported by an NIH grant (R01GM093123) and two NSF grants (DBI 1759934 and IIS1763246). ACM acknowledges the support by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy -EXC 2155 "RESIST" - Project ID 39087428. DK acknowledges the support from the National Institutes of Health (R01GM123055) and the National Science Foundation (DMS1614777, CMMI1825941). PB acknowledges the support from the National Institutes of Health (R01GM60595). GB and BZK acknowledge the support from the National Science Foundation (NSF 1458390) and NIH DP1MH110234. FS was funded by the ERC StG 757700 "HYPER-INSIGHT" and by the Spanish Ministry of Science, Innovation and Universities grant BFU2017-89833-P. FS further acknowledges the funding from the Severo Ochoa award to the IRB Barcelona. TS was funded by the Centre of Excellence project "BioProspecting of Adriatic Sea", co-financed by the Croatian Government and the European Regional Development Fund (KK.01.1.1.01.0002). The work of SK was funded by ATT Tieto kayttoon grant and Academy of Finland. JB and HM acknowledge the support of the University of Turku, the Academy of Finland and CSC -IT Center for Science Ltd. TB and SM were funded by the NIH awards UL1 TR002319 and U24 TR002306. The work of CZ and ZW was funded by the National Institutes of Health R15GM120650 to ZW and start-up funding from the University of Miami to ZW. The work of PWR was supported by the National Cancer Institute of the National Institutes of Health under Award Number U01CA198942. PR acknowledges NSF grant DBI-1458477. PT acknowledges the support from Helsinki Institute for Life Sciences. The work of AJM was funded by the Academy of Finland (No. 292589). The work of FZ and WT was funded by the National Natural Science Foundation of China (31671367, 31471245, 91631301) and the National Key Research and Development Program of China (2016YFC1000505, 2017YFC0908402]. CS acknowledges the support by the Italian Ministry of Education, University and Research (MIUR) PRIN 2017 project 2017483NH8. SZ is supported by the National Natural Science Foundation of China (No. 61872094 and No. 61572139) and Shanghai Municipal Science and Technology Major Project (No. 2017SHZDZX01). PLF and RLH were supported by the National Institutes of Health NIH R35-GM128637 and R00-GM097033. JG, DTJ, CW, DC, and RF were supported by the UK Biotechnology and Biological Sciences Research Council (BB/N019431/1, BB/L020505/1, and BB/L002817/1) and Elsevier. The work of YZ and CZ was funded in part by the National Institutes of Health award GM083107, GM116960, and AI134678; the National Science Foundation award DBI1564756; and the Extreme Science and Engineering Discovery Environment (XSEDE) award MCB160101 and MCB160124.; Zhou , N , Jiang , Y , Bergquist , T R , Lee , A J , Kacsoh , B Z , Crocker , A W , Lewis , K A , Georghiou , G , Nguyen , H N , Hamid , M N , Davis , L , Dogan , T , Atalay , V , Rifaioglu , A S , Dalkiran , A , Atalay , R C , Zhang , C , Hurto , R L , Freddolino , P L , Zhang , Y , Bhat , P , Supek , F , Fernandez , J M , Gemovic , B , Perovic , V R , Davidovic , R S , Sumonja , N , Veljkovic , N , Asgari , E , Mofrad , M R K , Profiti , G , Savojardo , C , Martelli , P L , Casadio , R , Boecker , F , Schoof , H , Kahanda , I , Thurlby , N , McHardy , A C , Renaux , A , Saidi , R , Gough , J , Freitas , A A , Antczak , M , Fabris , F , Wass , M N , Hou , J , Cheng , J , Wang , Z , Romero , A E , Paccanaro , A , Yang , H , Goldberg , T , Zhao , C , Holm , L , Törönen , P , Medlar , A J , Zosa , E , Borukhov , I , Novikov , I , Wilkins , A , Lichtarge , O , Chi , P-H , Tseng , W-C , Linial , M , Rose , P W , Dessimoz , C , Vidulin , V , Dzeroski , S , Sillitoe , I , Das , S , Lees , J G , Jones , D T , Wan , C , Cozzetto , D , Fa , R , Torres , M , Vesztrocy , A W , Rodriguez , J M , Tress , M L , Frasca , M , Notaro , M , Grossi , G , Petrini , A , Re , M , Valentini , G , Mesiti , M , Roche , D B , Reeb , J , Ritchie , D W , Aridhi , S , Alborzi , S Z , Devignes , M-D , Koo , D C E , Bonneau , R , Gligorijevic , V , Barot , M , Fang , H , Toppo , S , Lavezzo , E , Falda , M , Berselli , M , Tosatto , S C E , Carraro , M , Piovesan , D , Rehman , H U , Mao , Q , Zhang , S , Vucetic , S , Black , G S , Jo , D , Suh , E , Dayton , J B , Larsen , D J , Omdahl , A R , McGuffin , L J , Brackenridge , D A , Babbitt , P C , Yunes , J M , Fontana , P , Zhang , F , Zhu , S , You , R , Zhang , Z , Dai , S , Yao , S , Tian , W , Cao , R , Chandler , C , Amezola , M , Johnson , D , Chang , J-M , Liao , W-H , Liu , Y-W , Pascarelli , S , Frank , Y , Hoehndorf , R , Kulmanov , M , Boudellioua , I , Politano , G , Di Carlo , S , Benso , A , Hakala , K , Ginter , F , Mehryary , F , Kaewphan , S , Bjorne , J , Moen , H , Tolvanen , M E E , Salakoski , T , Kihara , D , Jain , A , Smuc , T , Altenhoff , A , Ben-Hur , A , Rost , B , Brenner , S E , Orengo , C A , Jeffery , C J , Bosco , G , Hogan , D A , Martin , M J , O'Donovan , C , Mooney , S D , Greene , C S , Radivojac , P & Friedberg , I 2019 , ' The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens ' , Genome Biology , vol. 20 , no. 1 , 244 . https://doi.org/10.1186/s13059-019-1835-8; ORCID: /0000-0003-2482-0663/work/68617657; http://hdl.handle.net/10138/309448; bbcc4816-628a-4e90-8797-a902971e0328; 000498615000001
الاتاحة: http://hdl.handle.net/10138/309448
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5Academic Journal
المؤلفون: Crocker, Alex W., Harty, Colleen E., Hammond, John H., Willger, Sven D., Salazar, Pedro, Botelho, Nico J., Jacobs, Nicholas J., Hogan, Deborah A.
المساهمون: Metcalf, William W., HHS | NIH | National Institute of Allergy and Infectious Diseases, HHS | NIH | National Institute of General Medical Sciences, HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases, Cystic Fibrosis Foundation
المصدر: Journal of Bacteriology ; volume 201, issue 23 ; ISSN 0021-9193 1098-5530
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6Academic Journal
المؤلفون: Grahl, Nora, Dolben, Emily L., Filkins, Laura M., Crocker, Alex W., Willger, Sven D., Morrison, Hilary G., Sogin, Mitchell L., Ashare, Alix, Gifford, Alex H., Jacobs, Nicholas J., Schwartzman, Joseph D., Hogan, Deborah A.
المساهمون: Mitchell, Aaron P., HHS | National Institutes of Health, Cystic Fibrosis Foundation
المصدر: mSphere ; volume 3, issue 4 ; ISSN 2379-5042
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7Academic Journal
المؤلفون: Grahl, Nora, Demers, Elora G, Crocker, Alex W, Hogan, Deborah A
المصدر: Dartmouth Scholarship
مصطلحات موضوعية: guide rna, resistance, lusitaniae, crispr-cas9, electroporation, transformation, crispr/cas9, glabrata, cells, crispr, candida, auris, genome editing, molecular methods, Life Sciences, Microbiology
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8Academic Journal
المساهمون: Comstock, Laurie E., Cystic Fibrosis Foundation, HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases, HHS | NIH | National Institute of Environmental Health Sciences, HHS | NIH | National Institute of General Medical Sciences
المصدر: Journal of Bacteriology ; volume 203, issue 13 ; ISSN 0021-9193 1098-5530
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9Periodical
المؤلفون: Petrucco, Claudia A., Crocker, Alex W., D’Alessandro, Alec, Medina, Edgar M., Gorman, Olivia, McNeill, Jessica, Gladfelter, Amy S., Lew, Daniel J.
المصدر: Molecular Biology of the Cell; April 2024, Vol. 35 Issue: 4