المؤلفون: Coşkuner Weber, Orkid

المساهمون: TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: AlphaFold3, AlphaFold2, C-I-TASSER I-TASSER, Phyre2, ESMFold, RoseTTAFold, REMD simulations, Intrinsically disordered proteins

وصف الملف: application/pdf

Relation: International Journal of Biological Macromolecules; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1377; 276

الاتاحة: https://hdl.handle.net/20.500.12846/1377

المؤلفون: Coşkuner Weber, Orkid

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: Intrinsically disordered proteins, Amyloid-β42, Homology modeling, Replica exchange molecular dynamics simulations

وصف الملف: application/pdf

Relation: Journal of the Turkish Chemical Society; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1379; 11; 1151; 1164

الاتاحة: https://hdl.handle.net/20.500.12846/1379

المؤلفون: Coşkuner Weber, Orkid, Uversky, Vladimir N.

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: Homology modeling, Molecular dynamics simulations, Machine learning with molecular dynamics, Quantum computing, Intrinsically disordered proteins, Proteins with intrinsically disordered regions

وصف الملف: image/jpeg

Relation: Current Protein & Peptide Science; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1228; 25; 163; 171; 001177330400006

الاتاحة: https://hdl.handle.net/20.500.12846/1228

المؤلفون: Alici, Hakan, Uversky, Vladimir N., Kang, David E., Woo, Junga Alexa, Coskuner-Weber, Orkid

المصدر: Current Protein & Peptide Science ; volume 26, issue 3, page 201-212 ; ISSN 1389-2037

الاتاحة: https://doi.org/10.2174/0113892037335036241007043530
https://www.eurekaselect.com/article/download?doi=10.2174/0113892037335036241007043530
https://www.eurekaselect.com/235609/article

المؤلفون: Coskuner-Weber, Orkid, Yuce-Erarslan, Elif, Uversky, Vladimir N.

المصدر: Molecular Medicine Faculty Publications

مصطلحات موضوعية: Synthetics Intrinsically Disordered Polymers (Sidps), Soft Robotics, Design, Synthesis, Characterization, Medicine and Health Sciences

وصف الملف: application/pdf

Relation: https://digitalcommons.usf.edu/mme_facpub/1027; https://digitalcommons.usf.edu/context/mme_facpub/article/2047/viewcontent/polymers_15_00763.pdf

الاتاحة: https://digitalcommons.usf.edu/mme_facpub/1027
https://doi.org/10.3390/polym15030763
https://digitalcommons.usf.edu/context/mme_facpub/article/2047/viewcontent/polymers_15_00763.pdf

المؤلفون: Coskuner-Weber, Orkid, Yuce-Erarslan, Elif, Uversky, Vladimir N.

المصدر: Molecular Medicine Faculty Publications

مصطلحات موضوعية: Synthetics Intrinsically Disordered Polymers (Sidps), Soft Robotics, Design, Synthesis, Characterization, Medicine and Health Sciences

وصف الملف: application/pdf

Relation: https://digitalcommons.usf.edu/mme_facpub/1027; https://digitalcommons.usf.edu/context/mme_facpub/article/2047/viewcontent/polymers_15_00763.pdf

الاتاحة: https://digitalcommons.usf.edu/mme_facpub/1027
https://doi.org/10.3390/polym15030763
https://digitalcommons.usf.edu/context/mme_facpub/article/2047/viewcontent/polymers_15_00763.pdf

المؤلفون: Yüce-Erarslan, Elif, Kasem, Haytam, Uversky, Vladimir N., Coşkuner Weber, Orkid, Domb, Abraham (Avi) J.

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: Bioinspired polymers, Intrinsically disordered polymers, Drug delivery, Organ transplantation, Artificial organs, Immune compatibility

وصف الملف: application/pdf

Relation: Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1225; 15; 2406; 000997952700001

الاتاحة: https://hdl.handle.net/20.500.12846/1225

المؤلفون: Uversky, Vladimir N., Coşkuner Weber, Orkid, Yüce-Erarslan, Elif

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: Synthetics intrinsically disordered polymers (sIDPs), Soft robotics, Design, Synthesis, Characterization

وصف الملف: application/pdf

Relation: Polymers; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1224; 15; 763; 000930426300001

الاتاحة: https://hdl.handle.net/20.500.12846/1224

المؤلفون: Alıcı, Hakan, Uversky, Vladimir N., Kang, David E., Woo, Junga Alexa, Coşkuner Weber, Orkid

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: CHCHD1, G58R mutation, Genetics, Mitochondrial myopathy

وصف الملف: application/pdf

Relation: Journal of Biomolecular Structure and Dynamics; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1226; 001011920800001

الاتاحة: https://hdl.handle.net/20.500.12846/1226

المؤلفون: Alıcı, Hakan, Uversky, Vladimir N., Kang, David E., Woo, Junga Alexa, Coşkuner Weber, Orkid

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: Bioinformatics, CHCHD10, G66V, Genetics, Jokela type spinal muscular atrophy, Multiple runmolecular dynamics simulations, Structural properties

وصف الملف: application/pdf

Relation: Wiley; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1223; 91; 739; 749; 000915396500001

الاتاحة: https://hdl.handle.net/20.500.12846/1223

المؤلفون: Alıcı, Hakan, Uversky, Vladimir N., Liu, Tian, Kang, David E., Woo, Junga Alexa, Coşkuner Weber, Orkid

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: G58R, Genetics, CHCHD10, Mitochondrial myopathy, Structural properties, Multiple-run molecular dynamics simulations, Bioinformatics

وصف الملف: application/pdf; image/jpeg

Relation: ACS Chemical Neuroscience; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1227; 001005912900001

الاتاحة: https://hdl.handle.net/20.500.12846/1227
https://pubs.acs.org/doi/10.1021/acschemneuro.3c00125

المؤلفون: Alıcı, Hakan, Uversky, Vladimir N., Coşkuner Weber, Orkid, Hasekioğlu, Orkun

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

وصف الملف: application/octet-stream

Relation: Advances in Protein Molecular and Structural Biology Methods; Kitap Bölümü - Uluslararası; Alıcı, H., Uversky, Vladimir N., Coşkuner Weber, O., Hasekioğlu, O. (2022). Chapter 33 - Methods to study the effect of solution variables on the conformational dynamics of intrinsically disordered proteins. Advances in Protein Molecular and Structural Biology Methods içerisinde 551-563. Elsevier Academic Press.; https://hdl.handle.net/20.500.12846/1229; 551; 563

الاتاحة: https://hdl.handle.net/20.500.12846/1229

المؤلفون: Habiboğlu, Mehmet Gökhan, Coşkuner Weber, Orkid, Uversky, Vladimir N., Teplow, David

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

وصف الملف: application/octet-stream

Relation: Computer Simulations of Aggregation of Proteins and Peptides; Kitap Bölümü - Uluslararası; Habiboğlu, Mehmet G., Coşkuner Weber, O., Uversky, Vladimir N., Teplow, D. (2022). From quantum mechanics, classical mechanics, and bioinformatics to artificial intelligence studies in neurodegenerative diseases. Computer Simulations of Aggregation of Proteins and Peptides içerisinde 139-173. Springer.; https://link.springer.com/protocol/10.1007/978-1-0716-1546-1_8; https://hdl.handle.net/20.500.12846/1230; 139; 173

الاتاحة: https://hdl.handle.net/20.500.12846/1230
https://link.springer.com/protocol/10.1007/978-1-0716-1546-1_8

المؤلفون: Akbaryak, Ibrahim Y., Caglayan, Sule I., Kurgan, Lukasz, Uversky, Vladimir N., Coskuner-Weber, Orkid

المصدر: Molecular Medicine Faculty Publications

مصطلحات موضوعية: Sars-cov-2 Main Protease, Dynamics, Replica Exchange MD Simulations, Medicine and Health Sciences

وصف الملف: application/pdf

Relation: https://digitalcommons.usf.edu/mme_facpub/1047; https://digitalcommons.usf.edu/context/mme_facpub/article/2033/viewcontent/1_s2.0_S2665928X22000319_main.pdf

الاتاحة: https://digitalcommons.usf.edu/mme_facpub/1047
https://doi.org/10.1016/j.crstbi.2022.11.001
https://digitalcommons.usf.edu/context/mme_facpub/article/2033/viewcontent/1_s2.0_S2665928X22000319_main.pdf

المؤلفون: Akbaryak, Ibrahim Y., Caglayan, Sule I., Kurgan, Lukasz, Uversky, Vladimir N., Coskuner-Weber, Orkid

المصدر: Molecular Medicine Faculty Publications

مصطلحات موضوعية: Sars-cov-2 Main Protease, Dynamics, Replica Exchange MD Simulations, Medicine and Health Sciences

وصف الملف: application/pdf

Relation: https://digitalcommons.usf.edu/mme_facpub/1047; https://digitalcommons.usf.edu/context/mme_facpub/article/2033/viewcontent/1_s2.0_S2665928X22000319_main.pdf

الاتاحة: https://digitalcommons.usf.edu/mme_facpub/1047
https://doi.org/10.1016/j.crstbi.2022.11.001
https://digitalcommons.usf.edu/context/mme_facpub/article/2033/viewcontent/1_s2.0_S2665928X22000319_main.pdf

المؤلفون: Akbayrak, İbrahim Yağız, Çağlayan, Şule İrem, Kurgan, Lukasz, Uversky, Vladimir N., Coşkuner Weber, Orkid

المساهمون: orcid:0000-0002-0772-9350, TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: SARS-CoV-2 main protease, Dynamics, Replica exchange MD simulations

وصف الملف: application/pdf

Relation: Current Research in Structural Biology; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; Akbayrak, İbrahim Y., Çağlayan, Şule İ., Kurgan, L., Uversky, Vladimir N., Coşkuner Weber, O. (2022). Insights into the structural properties of SARS-CoV-2 main protease. Current Research in Structural Biology, 349-355.; https://hdl.handle.net/20.500.12846/1221; 349; 355

الاتاحة: https://hdl.handle.net/20.500.12846/1221

المؤلفون: Akbayrak, Ibrahim Yagiz, Caglayan, Sule Irem, Kurgan, Lukasz, Uversky, Vladimir N., Coskuner-Weber, Orkid

المصدر: Current Research in Structural Biology ; volume 4, page 349-355 ; ISSN 2665-928X

الاتاحة: http://dx.doi.org/10.1016/j.crstbi.2022.11.001
https://api.elsevier.com/content/article/PII:S2665928X22000319?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S2665928X22000319?httpAccept=text/plain

المؤلفون: Uversky, Vladimir N., Coşkuner Weber, Orkid

المساهمون: TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: Liquid-liquid phase separation, Intrinsically disordered proteins, Proteins with intrinsically disordered regions, Experimental tools, Computational tools

وصف الملف: image/jpeg

Relation: Current Protein & Peptide Science; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://www.eurekaselect.com/article/141534; https://hdl.handle.net/20.500.12846/1378; 25

الاتاحة: https://hdl.handle.net/20.500.12846/1378
https://www.eurekaselect.com/article/141534

المؤلفون: Ballı, Öykü İrem, Cağlayan, Şule İrem, Coşkuner Weber, Orkid, Uverksy, Vladimir N.

المساهمون: TAÜ, Fen Fakültesi, Moleküler Biyoteknoloji Bölümü

مصطلحات موضوعية: I-FABP, Intrinsic disorder, REMD simulations, Bioinformatics, Structural properties, Gastrointestinal disorders

وصف الملف: image/jpeg

Relation: Protein & Peptide Letters; Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı; https://hdl.handle.net/20.500.12846/1380; 31; 458; 468

الاتاحة: https://hdl.handle.net/20.500.12846/1380

المؤلفون: Balli, Oyku Irem, Caglayan, Sule Irem, Uverksy, Vladimir N., Coskuner-Weber, Orkid

المصدر: Protein & Peptide Letters ; volume 31, issue 6, page 458-468 ; ISSN 0929-8665

الاتاحة: http://dx.doi.org/10.2174/0109298665313811240530055004
https://www.eurekaselect.com/article/download?doi=10.2174/0109298665313811240530055004
https://www.eurekaselect.com/231214/article