المؤلفون: Paul J. McMurdie, Magdalena K. Stoeva, Nicholas Justice, Madeleine Nemchek, Christian M. K. Sieber, Surabhi Tyagi, Jessica Gines, Connor T. Skennerton, Michael Souza, Orville Kolterman, John Eid

المصدر: BMC Microbiology, Vol 22, Iss 1, Pp 1-18 (2022)

مصطلحات موضوعية: Anaerobutyricum hallii, Akkermansia muciniphila, Bile acids, Butyrate, Clostridium butyricum, Metabolomics, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1471-2180

URL الوصول: https://doaj.org/article/6b3e075cb1f84c5db1c36eb1b3138e45

المؤلفون: Bénédicte Colnet, Christian M. K. Sieber, Fanny Perraudeau, Marion Leclerc

المصدر: Frontiers in Microbiology, Vol 12 (2021)

مصطلحات موضوعية: PUL, human gut bacteria, fiber, prebiotics, annotation, glycosyl hydrolase, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.632567/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/3044381cdbc849f2a250710bb41f3c4e

المؤلفون: Christian M. K. Sieber, Blair G. Paul, Cindy J. Castelle, Ping Hu, Susannah G. Tringe, David L. Valentine, Gary L. Andersen, Jillian F. Banfield

المصدر: mBio, Vol 10, Iss 6 (2019)

مصطلحات موضوعية: BD1-5, CPR, candidate phyla radiation, genomes from metagenomes, gracilibacteria, surface proteins, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2150-7511

URL الوصول: https://doaj.org/article/09bed20fa5fe4743a01df2d9cf72f9a1

المؤلفون: Eva-Maria Niehaus, Julia Schumacher, Immo Burkhardt, Patrick Rabe, Martin Münsterkötter, Ulrich Güldener, Christian M. K. Sieber, Jeroen S. Dickschat, Bettina Tudzynski

المصدر: Frontiers in Microbiology, Vol 8 (2017)

مصطلحات موضوعية: Fusarium fujikuroi, GATA transcription factor, conidiation, secondary metabolism, gene expression, NsdD, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: http://journal.frontiersin.org/article/10.3389/fmicb.2017.01175/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/ec58c55e74584398b4250a182e8916f9

المؤلفون: Paul J. McMurdie (11920802), Magdalena K. Stoeva (11920805), Nicholas Justice (11920808), Madeleine Nemchek (11920811), Christian M. K. Sieber (11920814), Surabhi Tyagi (11920817), Jessica Gines (11920820), Connor T. Skennerton (11920823), Michael Souza (11920826), Orville Kolterman (11920829), John Eid (11920832)

مصطلحات موضوعية: Biochemistry, Medicine, Pharmacology, Cancer, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Anaerobutyricum hallii, Akkermansia muciniphila, Bile acids, Butyrate, Clostridium butyricum, Metabolomics, Short-chain fatty acids, Sulfonylurea, Type 2 diabetes, Ursodeoxycholate

Relation: https://figshare.com/articles/journal_contribution/Additional_file_1_of_Increased_circulating_butyrate_and_ursodeoxycholate_during_probiotic_intervention_in_humans_with_type_2_diabetes/18070766

الاتاحة: https://doi.org/10.6084/m9.figshare.18070766.v1

المؤلفون: Andreas Pfannmüller, Johannes Leufken, Lena Studt, Caroline B Michielse, Christian M K Sieber, Ulrich Güldener, Susan Hawat, Michael Hippler, Christian Fufezan, Bettina Tudzynski

المصدر: PLoS ONE, Vol 12, Iss 4, p e0176194 (2017)

مصطلحات موضوعية: Medicine, Science

Relation: http://europepmc.org/articles/PMC5404775?pdf=render; https://doaj.org/toc/1932-6203; https://doaj.org/article/78ef82dcf45b4214bd5349b756d0d5b8

الاتاحة: https://doi.org/10.1371/journal.pone.0176194
https://doaj.org/article/78ef82dcf45b4214bd5349b756d0d5b8

المؤلفون: Eva-Maria Niehaus, Hee-Kyoung Kim, Martin Münsterkötter, Slavica Janevska, Birgit Arndt, Svetlana A Kalinina, Petra M Houterman, Il-Pyung Ahn, Ilaria Alberti, Stefano Tonti, Da-Woon Kim, Christian M K Sieber, Hans-Ulrich Humpf, Sung-Hwan Yun, Ulrich Güldener, Bettina Tudzynski

المصدر: PLoS Pathogens, Vol 13, Iss 10, p e1006670 (2017)

مصطلحات موضوعية: Immunologic diseases. Allergy, RC581-607, Biology (General), QH301-705.5

Relation: https://doi.org/10.1371/journal.ppat.1006670; https://doaj.org/toc/1553-7366; https://doaj.org/toc/1553-7374; https://doaj.org/article/84db60c79ce94639a43728778e051465

الاتاحة: https://doi.org/10.1371/journal.ppat.1006670
https://doaj.org/article/84db60c79ce94639a43728778e051465

المؤلفون: Eva-Maria Niehaus, Slavica Janevska, Katharina W von Bargen, Christian M K Sieber, Henning Harrer, Hans-Ulrich Humpf, Bettina Tudzynski

المصدر: PLoS ONE, Vol 9, Iss 7, p e103336 (2014)

مصطلحات موضوعية: Medicine, Science

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25058475/pdf/?tool=EBI; https://doaj.org/toc/1932-6203; https://doaj.org/article/81228d523ed54b5c8d2975577f777fa4

الاتاحة: https://doi.org/10.1371/journal.pone.0103336
https://doaj.org/article/81228d523ed54b5c8d2975577f777fa4

المؤلفون: Christian M K Sieber, Wanseon Lee, Philip Wong, Martin Münsterkötter, Hans-Werner Mewes, Clemens Schmeitzl, Elisabeth Varga, Franz Berthiller, Gerhard Adam, Ulrich Güldener

المصدر: PLoS ONE, Vol 9, Iss 10, p e110311 (2014)

مصطلحات موضوعية: Medicine, Science

Relation: http://europepmc.org/articles/PMC4198257?pdf=render; https://doaj.org/toc/1932-6203; https://doaj.org/article/503f626aa50e4cceb585784bd445d0d0

الاتاحة: https://doi.org/10.1371/journal.pone.0110311
https://doaj.org/article/503f626aa50e4cceb585784bd445d0d0

المؤلفون: Philipp Wiemann, Christian M K Sieber, Katharina W von Bargen, Lena Studt, Eva-Maria Niehaus, Jose J Espino, Kathleen Huß, Caroline B Michielse, Sabine Albermann, Dominik Wagner, Sonja V Bergner, Lanelle R Connolly, Andreas Fischer, Gunter Reuter, Karin Kleigrewe, Till Bald, Brenda D Wingfield, Ron Ophir, Stanley Freeman, Michael Hippler, Kristina M Smith, Daren W Brown, Robert H Proctor, Martin Münsterkötter, Michael Freitag, Hans-Ulrich Humpf, Ulrich Güldener, Bettina Tudzynski

المصدر: PLoS Pathogens, Vol 9, Iss 6, p e1003475 (2013)

مصطلحات موضوعية: Immunologic diseases. Allergy, RC581-607, Biology (General), QH301-705.5

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23825955/?tool=EBI; https://doaj.org/toc/1553-7366; https://doaj.org/toc/1553-7374; https://doaj.org/article/64ccef6ac774468e98cdc339e19a9141

الاتاحة: https://doi.org/10.1371/journal.ppat.1003475
https://doaj.org/article/64ccef6ac774468e98cdc339e19a9141

المؤلفون: Bénédicte Colnet, Christian M. K. Sieber, Fanny Perraudeau, Marion Leclerc

المصدر: Frontiers in Microbiology
Frontiers in Microbiology, Vol 12 (2021)

مصطلحات موضوعية: Microbiology (medical), Glycan, In silico, Inulin, Computational biology, Genome, Microbiology, glycosyl hydrolase, growth prediction, chemistry.chemical_compound, Laminarin, Arabinoxylan, Glycoside hydrolase, PUL, Original Research, biology, Bacteroidetes, biology.organism_classification, QR1-502, chemistry, annotation, biology.protein, human gut bacteria, prebiotics, fiber

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::db01ec916338583a3b49b6652a798b80
https://pubmed.ncbi.nlm.nih.gov/34690938

المؤلفون: Bénédicte Colnet (11527459), Christian M. K. Sieber (11527462), Fanny Perraudeau (3250209), Marion Leclerc (376354)

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, PUL, human gut bacteria, fiber, prebiotics, annotation, glycosyl hydrolase, growth prediction, Bacteroidetes

Relation: https://figshare.com/articles/dataset/Data_Sheet_1_FiberGrowth_Pipeline_A_Framework_Toward_Predicting_Fiber-Specific_Growth_From_Human_Gut_Bacteroidetes_Genomes_zip/16748119

الاتاحة: https://doi.org/10.3389/fmicb.2021.632567.s001

المؤلفون: Bethany Ladd, Joanne B. Emerson, Rex R. Malmstrom, M. Cathryn Ryan, Jessica K. Jarett, David Geller-McGrath, Brian C. Thomas, Tanja Woyke, Andreas Klingl, Karthik Anantharaman, Michaela Stieglmeier, Christian M. K. Sieber, Alexander J. Probst, Jillian F. Banfield

المصدر: Nature Microbiology
Probst, AJ; Ladd, B; Jarett, JK; Geller-Mcgrath, DE; Sieber, CMK; Emerson, JB; et al.(2018). Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface. Nature Microbiology, 3(3), 328-336. doi: 10.1038/s41564-017-0098-y. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/95x122xv
Nature microbiology, vol 3, iss 3

مصطلحات موضوعية: 0301 basic medicine, Microbiology (medical), Geologic Sediments, Microorganism, Earth science, Immunology, Chemie, Aquifer, Applied Microbiology and Biotechnology, Microbiology, Article, Carbon Cycle, 03 medical and health sciences, Microbial ecology, Sulfurimonas, Genetics, 14. Life underwater, Symbiosis, Groundwater, Phylogeny, geography, Autotrophic Processes, geography.geographical_feature_category, biology, Environmental microbiology, Bacteria, Cell Biology, Biogeochemistry, biology.organism_classification, Archaea, 6. Clean water, 030104 developmental biology, Medical Microbiology, 13. Climate action, Metagenomics, Environmental science

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::225fb8cae3167027f97c306bdcc34c78
http://europepmc.org/articles/PMC6792436

المؤلفون: Panagiotis S. Adam, Guillaume Borrel, Wen-Jun Li, Steven J. Hallam, William P. Inskeep, Luke J. McKay, Gary L. Andersen, Simonetta Gribaldo, Quentin Letourneur, Amine Ghozlane, Isabel N. Sierra-Garcia, Gerard Muyzer, Valéria Maia de Oliveira, Lin-Xing Chen, Jillian F. Banfield, Christian M. K. Sieber

المساهمون: Biologie Evolutive de la Cellule Microbienne - Evolutionary Biology of the Microbial Cell, Institut Pasteur [Paris] (IP), Université Paris Diderot - Paris 7 (UPD7), Montana State University (MSU), Lawrence Berkeley National Laboratory [Berkeley] (LBNL), Universidade Estadual de Campinas = University of Campinas (UNICAMP), Hub Bioinformatique et Biostatistique - Bioinformatics and Biostatistics HUB, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Sun Yat-Sen University [Guangzhou] (SYSU), University of British Columbia (UBC), University of Amsterdam [Amsterdam] (UvA), G.B. acknowledges support from the Institut Pasteur through a Roux-Cantarini fellowship. P.S.A. is supported by a PhD fellowship from Paris Diderot University and by funds from the PhD Programme ‘Frontières du Vivant (FdV)-Programme Bettencourt’. S.G. acknowledges funding from the French National Agency for Research Grant ArchEvol (No. ANR-16-CE02-0005-01). This work used the computational and storage services (TARS cluster) provided by the IT department at Institut Pasteur, Paris. S.J.H. acknowledges support from the US Department of Energy (DOE) JGI supported by the Office of Science of US DOE Contract No. DE-AC02–05CH11231, the Natural Sciences and Engineering Research Council (NSERC) of Canada, Genome British Columbia, Genome Canada, Canada Foundation for Innovation (CFI) and the Tula Foundation. I.N.S.-G. and V.M.d.O. are grateful to São Paulo Research Foundation—FAPESP (process Nos. 2011/14501-6 and 2013/20436-8) and Petrobras for financial support and to N. Gray and I. Head from the School of Civil Engineering and Geosciences at Newcastle University for lab facilities. W-J.L. was supported by Key Projects of Ministry of Science and Technology (MOST) (Nos. 2013DFA31980 and 2015FY110100). G.M. was supported by the ERC Advanced Grant PARASOL (No. 322551). L.J.M. appreciates funding from the NASA Postdoctoral Programme through the NASA Astrobiology Institute and W.P.I. was supported by the Montana Agricultural Experiment Station (Project No. 911300)., ANR-16-CE02-0005,Arch-Evol,Approches phylogenomiques pour étudier l'origine et évolution des Archées(2016), European Project: 322551,EC:FP7:ERC,ERC-2012-ADG_20120314,PARASOL(2013), Institut Pasteur [Paris], University of Campinas [Campinas] (UNICAMP), Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Sun Yat-Sen University (SYSU), Freshwater and Marine Ecology (IBED, FNWI)

المصدر: Nature Microbiology
Nature Microbiology, 2019, ⟨10.1038/s41564-019-0363-3⟩
Nature Microbiology, Nature Publishing Group, 2019, ⟨10.1038/s41564-019-0363-3⟩
Nature Microbiology, 4(4), 603-613. Nature Publishing Group
Nature microbiology
Nature microbiology, vol 4, iss 4

مصطلحات موضوعية: Microbiology (medical), Methanogenesis, Immunology, Biodiversity, Biology, [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics, Phylogenetics and taxonomy, Applied Microbiology and Biotechnology, Microbiology, Genome, Article, 03 medical and health sciences, Phylogenetics, Alkanes, Genetics, Gene, Phylogeny, 030304 developmental biology, 0303 health sciences, 030306 microbiology, [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE], DNA, Cell Biology, biology.organism_classification, Archaea, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, Archaeal, Medical Microbiology, 13. Climate action, Metagenomics, Evolutionary biology, Candidatus, Metagenome, Methane, Oxidation-Reduction

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5e3a768ef829795ba8a34be88970f4cc
https://hal-pasteur.archives-ouvertes.fr/pasteur-02059013

المؤلفون: Hans-Ulrich Humpf, Sarah M. Rösler, Christian M. K. Sieber, Bettina Tudzynski

المصدر: Applied Microbiology and Biotechnology. 100:5869-5882

مصطلحات موضوعية: 0301 basic medicine, Fusarium, 030106 microbiology, Secondary metabolite, Fumonisins, Applied Microbiology and Biotechnology, Microbiology, Fungal Proteins, 03 medical and health sciences, chemistry.chemical_compound, Gene Expression Regulation, Fungal, Fumonisin, Gene cluster, medicine, Gene, Plant Diseases, Fungal protein, biology, food and beverages, Oryza, General Medicine, Pathogenic fungus, biology.organism_classification, 030104 developmental biology, chemistry, Multigene Family, Bakanae, Biotechnology, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f38123cad4f1e3d81faf6f08602e9977
https://doi.org/10.1007/s00253-016-7426-7

المؤلفون: Susannah G. Tringe, Matthias Hess, Allison Sharrar, Christian M. K. Sieber, Alexander J. Probst, Jillian F. Banfield, Brian C. Thomas

المصدر: Nature microbiology, vol 3, iss 7
Sieber, CMK; Probst, AJ; Sharrar, A; Thomas, BC; Hess, M; Tringe, SG; et al.(2018). Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy. Nature Microbiology, 3(7), 836-843. doi: 10.1038/s41564-018-0171-1. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/5q6892m0
Nature Microbiology

مصطلحات موضوعية: 0301 basic medicine, Computer science, computer.software_genre, Applied Microbiology and Biotechnology, Genome, User-Computer Interface, 0302 clinical medicine, Soil Microbiology, Data Curation, 0303 health sciences, Environmental microbiology, Microbiota, Bacterial, food and beverages, Medical Microbiology, Community interaction, Data mining, Water Microbiology, Algorithms, Automated method, Microbiology (medical), Bioinformatics, 030106 microbiology, Immunology, education, Computational biology, Biology, Microbiology, Article, Set (abstract data type), 03 medical and health sciences, Genome assembly algorithms, Genetics, Animals, Humans, 030304 developmental biology, Data curation, Extramural, Human Genome, Computational Biology, Cell Biology, Gastrointestinal Microbiome, body regions, Metagenomics, Key (cryptography), computer, Software, Genome, Bacterial, 030217 neurology & neurosurgery

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bb4e70b5d412a6a3067bc524c5ecfd4a
https://escholarship.org/uc/item/5q6892m0

المؤلفون: Jeroen S. Dickschat, Hans-Ulrich Humpf, Christian M. K. Sieber, Bettina Tudzynski, Lena Studt, Birgit Arndt, Immo Burkhardt, Eva-Maria Niehaus, Slavica Janevska

المصدر: Environmental Microbiology. 18:936-956

مصطلحات موضوعية: 0301 basic medicine, Genetics, chemistry.chemical_classification, 030106 microbiology, Biology, Microbiology, Major facilitator superfamily, Amino acid, 03 medical and health sciences, Polyketide, chemistry.chemical_compound, Biochemistry, chemistry, Biosynthesis, Polyketide synthase, Gene cluster, biology.protein, Gene, Ecology, Evolution, Behavior and Systematics, Fusaric acid

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::752f544a40bc21f20aac1b8384239c4b
https://doi.org/10.1111/1462-2920.13150

المؤلفون: Bettina Tudzynski, Jonas Ulrich, Ulrich Güldener, Christian M. K. Sieber, Martin Münsterkötter, Leonie Baumann, Jörg Kämper, Slavica Janevska

المصدر: Genetics 208, 153-171 (2018)

مصطلحات موضوعية: 0301 basic medicine, Genetics, Fusarium Fujikuroi, H3k36me3, Genome Stability, Histone Methyltransferase, Secondary Metabolism, Methyltransferase, Euchromatin, Heterochromatin, Saccharomyces cerevisiae, Chromosome, Methylation, Biology, biology.organism_classification, Genome, 03 medical and health sciences, 030104 developmental biology, Histone methyltransferase

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1698a92fd0cd2b7e247c6447592113f8
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=52366

المؤلفون: Alexander J, Probst, Ping, Hu, Christine L, Sun, Eric A, Dubinsky, Christian M K, Sieber, Jillian F, Banfield, Gary L, Andersen

المصدر: Proceedings of the National Academy of Sciences of the United States of America. 114(43)

مصطلحات موضوعية: Gulf of Mexico, Petroleum, Petroleum Pollution, Letters, Water Pollutants, Chemical, Environmental Monitoring

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::5f2fa930f53851a6b1ab7ea275e3da54
https://pubmed.ncbi.nlm.nih.gov/29073088

المؤلفون: Alexander J. Probst, Jillian F. Banfield, Gary L. Andersen, Eric A. Dubinsky, Christian M. K. Sieber, Christine L. Sun, Ping Hu

المصدر: Probst, AJ; Hu, P; Sun, CL; Dubinsky, EA; Sieber, CMK; Banfield, JF; et al.(2017). Reply to delmont and eren: Strain variants and population structure during the Deepwater Horizon oil spill. Proceedings of the National Academy of Sciences of the United States of America, 114(43), E8950-E8952. doi: 10.1073/pnas.1712466114. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/3079w0z9
Proceedings of the National Academy of Sciences of the United States of America, vol 114, iss 43

مصطلحات موضوعية: 0301 basic medicine, Gulf of Mexico, Multidisciplinary, Petroleum engineering, Strain (chemistry), biology, Population structure, Chemie, Chemical, Bermanella, biology.organism_classification, Oceanospirillales, 03 medical and health sciences, Paleontology, Petroleum, 030104 developmental biology, Metagenomics, Deepwater horizon, Oil spill, Candidatus, Water Pollutants, Petroleum Pollution, Environmental Monitoring

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::decc77f43b1cb9203336bf576fed269d
http://www.escholarship.org/uc/item/3079w0z9