المؤلفون: Stéphane Duboux, Catherine Ngom-Bru, Florac De Bruyn, Biljana Bogicevic

المصدر: Microorganisms, Vol 10, Iss 2, p 203 (2022)

مصطلحات موضوعية: Bifidobacterium, phylogeny, antibiotic resistance, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://www.mdpi.com/2076-2607/10/2/203; https://doaj.org/toc/2076-2607

URL الوصول: https://doaj.org/article/90c831c4fb744c46a51c779c5dd60b82

المؤلفون: Anne-Catherine Portmann, Coralie Fournier, Johan Gimonet, Catherine Ngom-Bru, Caroline Barretto, Leen Baert

المصدر: Frontiers in Microbiology, Vol 9 (2018)

مصطلحات موضوعية: validation, SNP, WGS, Listeria monocytogenes, Salmonella enterica, phylogeny, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: http://journal.frontiersin.org/article/10.3389/fmicb.2018.00446/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/8e0b2f7d5de648b2bd2531b47f49af77

المؤلفون: Shafiqul Alam Sarker, Shamima Sultana, Gloria Reuteler, Deborah Moine, Patrick Descombes, Florence Charton, Gilles Bourdin, Shawna McCallin, Catherine Ngom-Bru, Tara Neville, Mahmuda Akter, Sayeeda Huq, Firdausi Qadri, Kaisar Talukdar, Mohamed Kassam, Michèle Delley, Chloe Loiseau, Ying Deng, Sahar El Aidy, Bernard Berger, Harald Brüssow

المصدر: EBioMedicine, Vol 4, Iss C, Pp 124-137 (2016)

مصطلحات موضوعية: Bacteriophages, Diarrhea, Escherichia coli, Streptococcus, Bifidobacterium, Children, Bangladesh, Medicine, Medicine (General), R5-920

وصف الملف: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352396415302516; https://doaj.org/toc/2352-3964

URL الوصول: https://doaj.org/article/960cb712c63848d09c8a1f8c7c6d8b04

المؤلفون: Shaillay Dogra, Olga Sakwinska, Shu-E Soh, Catherine Ngom-Bru, Wolfram M. Brück, Bernard Berger, Harald Brüssow, Yung Seng Lee, Fabian Yap, Yap-Seng Chong, Keith M. Godfrey, Joanna D. Holbrook

المصدر: mBio, Vol 6, Iss 1 (2015)

مصطلحات موضوعية: Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2150-7511

URL الوصول: https://doaj.org/article/153deb9191df4141ac58523108f6a995

المؤلفون: Caroline Barretto, Cristian Rincón, Anne-Catherine Portmann, Catherine Ngom-Bru

المصدر: Genes; Volume 12; Issue 2; Pages: 275

مصطلحات موضوعية: whole genome sequencing, food industry, bioinformatics, workflow, data analysis, metadata, food safety, data quality

جغرافية الموضوع: agris

وصف الملف: application/pdf

Relation: Technologies and Resources for Genetics; https://dx.doi.org/10.3390/genes12020275

الاتاحة: https://doi.org/10.3390/genes12020275

المؤلفون: Monica Modesto, Catherine Ngom-Bru, Anne Bruttin, Solenn Pruvost, Shafiqul Alam Sarker, Tahmeed Ahmed, Olga Sakwinska, Paola Mattarelli, Stephane Duboux

مصطلحات موضوعية: Microbiology not elsewhere classified, Bifidobacterium longum, subspeciation, MLSA, cgMLST, HMO

Relation: https://figshare.com/articles/dataset/_i_Bifidobacterium_longum_i_subsp_iuvenis_subsp_nov_a_novel_subspecies_isolated_from_the_faeces_of_weaning_infants/23537901

الاتاحة: https://doi.org/10.6084/m9.figshare.23537901.v1
https://figshare.com/articles/dataset/_i_Bifidobacterium_longum_i_subsp_iuvenis_subsp_nov_a_novel_subspecies_isolated_from_the_faeces_of_weaning_infants/23537901

المؤلفون: Tommi Vatanen, Qi Yan Ang, Léa Siegwald, Shafiqul Alam Sarker, Caroline I. Le Roy, Stéphane Duboux, Omar Delannoy-Bruno, Catherine Ngom-Bru, Claire L. Boulangé, Martin Stražar, Julian Avila-Pacheco, Amy Deik, Kerry Pierce, Kevin Bullock, Courtney Dennis, Shamima Sultana, Sharika Sayed, Mahbubar Rahman, Tahmeed Ahmed, Monica Modesto, Paola Mattarelli, Clary B. Clish, Hera Vlamakis, Damian R. Plichta, Olga Sakwinska, Ramnik J. Xavier

المصدر: Cell. 185(23)

مصطلحات موضوعية: Bangladesh, Feces, Milk, Human, Child, Preschool, Infant, Humans, Oligosaccharides, Female, Bifidobacterium, Weaning, Child, Bifidobacterium longum, General Biochemistry, Genetics and Molecular Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::83a218a5bdb8f69550cc963410c0ae1c
https://pubmed.ncbi.nlm.nih.gov/36323316

المؤلفون: Stéphane, Duboux, Catherine, Ngom-Bru, Florac, De Bruyn, Biljana, Bogicevic

المصدر: Microorganisms. 10(2)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::944a73af758a8584795906a7351c64fa
https://pubmed.ncbi.nlm.nih.gov/35208658

المؤلفون: Harald Brüssow, Emmanuel Denou, Sophie Zuber, Catherine Ngom-bru, Caroline Barretto

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://jb.asm.org/content/189/22/8206.full.pdf.

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.621.1818; http://jb.asm.org/content/189/22/8206.full.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.621.1818
http://jb.asm.org/content/189/22/8206.full.pdf

المؤلفون: Emmanuel Courcelle, Yoann Beausse, Sébastien Letort, Olivier Stahl, Romain Fremez, Catherine Ngom-bru, Jérôme Gouzy, Thomas Faraut

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/01/6e/Nucleic_Acids_Res_2008_Jan_36(Database_issue)_D485-D490.tar.gz

وصف الملف: application/zip

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.283.1917

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.283.1917

المؤلفون: Leen Baert, Xiangyu Deng, Taylor Griswold, Catherine Ngom-Bru, Balamurugan Jagadeesan, Shaokang Zhang, Shaoting Li, Heather A. Carleton, Lee S. Katz

المصدر: Appl Environ Microbiol

مصطلحات موضوعية: Bacterial genome size, Biology, Serogroup, Applied Microbiology and Biotechnology, Genome, Polymorphism, Single Nucleotide, Disease Outbreaks, 03 medical and health sciences, SNP, Humans, Phylogeny, 030304 developmental biology, Whole genome sequencing, Genetics, 0303 health sciences, Ecology, Whole Genome Sequencing, 030306 microbiology, Salmonella enterica, Chromosomes, Bacterial, Subtyping, Interspersed Repetitive Sequences, Food Microbiology, Mobile genetic elements, Genome, Bacterial, Food Science, Biotechnology, SNP array, Reference genome, Plasmids

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0c55350443965ecde7e005d140288d06
https://europepmc.org/articles/PMC6881799/

المؤلفون: Harald Brüssow, Anne Bruttin, Kristina Keitel, Bernard Berger, Olga Sakwinska, Mélissa Lepage, Catherine Ngom Bru, Viktoria Bastic Schmid, Deborah Moine, Alain Gervaix

المصدر: Journal of clinical microbiology. 57(6)

مصطلحات موضوعية: Microbiology (medical), medicine.medical_specialty, business.industry, Bacteriology, Accession number (bioinformatics), medicine.disease, Gastroenterology, Pneumonia, Internal medicine, Medicine, Pyrosequencing, Sequence Read Archive, 610 Medicine & health, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::db84e2dc46dcb039cb1f1631368a85e5
https://pubmed.ncbi.nlm.nih.gov/24599973

المؤلفون: Caroline Barretto, Anne-Catherine Portmann, Coralie Fournier, Leen Baert, Johan Gimonet, Catherine Ngom-Bru

المصدر: Frontiers in Microbiology, Vol 9 (2018)
Frontiers in Microbiology

مصطلحات موضوعية: 0301 basic medicine, Microbiology (medical), lcsh:QR1-502, SNP, Bacterial genome size, Computational biology, Biology, phylogeny, Genome, Microbiology, DNA sequencing, lcsh:Microbiology, 03 medical and health sciences, Source tracking, Original Research, Whole genome sequencing, validation, outbreak, source tracking, Salmonella enterica, biology.organism_classification, DNA extraction, Listeria monocytogenes, 030104 developmental biology, Workflow, WGS

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f7ce3069f712024fe17bf49a12f65d60
http://journal.frontiersin.org/article/10.3389/fmicb.2018.00446/full

المؤلفون: Carine Blanchard, Laurent P. Nicod, Tobias Junt, Koshika Yadava, Nicola L. Harris, Benjamin J. Marsland, Eva S. Gollwitzer, Catherine Ngom-Bru, Aurélien Trompette, Norbert Sprenger, Anke Sichelstiel

المصدر: Nature Medicine. 20:159-166

مصطلحات موضوعية: DNA, Bacterial, Dietary Fiber, Molecular Sequence Data, Enzyme-Linked Immunosorbent Assay, Inflammation, Gut flora, Real-Time Polymerase Chain Reaction, Statistics, Nonparametric, General Biochemistry, Genetics and Molecular Biology, Allergic inflammation, Feces, Mice, Free fatty acid receptor 2, Hypersensitivity, medicine, Free fatty acid receptor 3, Animals, Receptor, Lung, DNA Primers, chemistry.chemical_classification, Base Sequence, biology, Bacteroidetes, Microbiota, Fatty Acids, Sequence Analysis, DNA, General Medicine, Dendritic cell, Flow Cytometry, biology.organism_classification, Adoptive Transfer, Hematopoiesis, Intestines, Mice, Inbred C57BL, chemistry, Immunology, Propionate, Cytokines, Female, medicine.symptom

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1db5fbe8a7093eb9b89dc7e19053a2b4
https://doi.org/10.1038/nm.3444

المؤلفون: Gilles Faucherand, Alienor Genevaz, Pierre Sagory-Zalkind, Stéphane Duboux, Coralie Fournier, Pierre-Emmanuel Ciron, Deborah Moine, Caroline Barretto, Agnès Iltis, Mohamed Kassam, Catherine Ngom-Bru, Patrick Descombes

المصدر: Genome Announcements

مصطلحات موضوعية: 0301 basic medicine, Whole genome sequencing, Genetics, biology, Lactobacillus fermentum, Strain (biology), food and beverages, Chromosome, biology.organism_classification, 03 medical and health sciences, 030104 developmental biology, Lactic acid bacterium, Plasmid, Prokaryotes, Molecular Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4a3d0ce22b361e0a0d6ca3b6fe3b6ac2
https://doi.org/10.1128/genomea.01254-16

المؤلفون: Adrianne Klijn, Catherine Ngom Bru, Patrick Descombes, Leen Baert, Yanjie Tang, Deborah Moine, Caroline Barretto, Mohamed Kassam

المصدر: Genome Announcements

مصطلحات موضوعية: 0301 basic medicine, Genetics, biology, Strain (biology), 030106 microbiology, Single-nucleotide polymorphism, biology.organism_classification, Genus Cronobacter, Cronobacter sakazakii, Genome, 03 medical and health sciences, 030104 developmental biology, TheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITY, Prokaryotes, Cronobacter, Molecular Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::df19c165adf6c9886f1725f082b64e7e
https://doi.org/10.1128/genomea.00142-16

المؤلفون: Mélissa Lepage, Bernard Berger, Clara L. Garcia Rodenas, Konstantinos Papagaroufalis, Aikaterini Fotiou, Catherine Ngom-Bru

المصدر: Journal of pediatric gastroenterology and nutrition. 63(6)

مصطلحات موضوعية: 0301 basic medicine, Limosilactobacillus reuteri, Colony Count, Microbial, Gestational Age, digestive system, Microbiology, 03 medical and health sciences, Feces, fluids and secretions, 0302 clinical medicine, Pregnancy, 030225 pediatrics, Medicine, Humans, Prospective Studies, biology, business.industry, Cesarean Section, Microbiota, Probiotics, Gastroenterology, Infant, Newborn, food and beverages, Infant, Fecal microbiota, biology.organism_classification, Infant newborn, Infant Formula, Lactobacillus reuteri, stomatognathic diseases, 030104 developmental biology, Infant formula, Pediatrics, Perinatology and Child Health, Colony count, Female, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b98a46c343ccb4987d55e4e2116381e3
https://pubmed.ncbi.nlm.nih.gov/27035371

المؤلفون: Caroline Barretto, Catherine Ngom-Bru

المصدر: Briefings in Bioinformatics. 13:747-750

مصطلحات موضوعية: biology, Computational biology, Gut flora, biology.organism_classification, digestive system, Diet, Gastrointestinal Tract, Human gut, Metagenomics, Humans, Metagenome, Molecular Biology, Analysis method, Information Systems

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ce4425324d691f51960aa1250870d968
https://doi.org/10.1093/bib/bbs019

المؤلفون: Sébastien Letort, Olivier Stahl, Yoann Beausse, Emmanuel Courcelle, Jérôme Gouzy, Catherine Ngom-Bru, Romain Fremez, Thomas Faraut

المساهمون: Unité mixte de recherche interactions plantes-microorganismes, Centre National de la Recherche Scientifique (CNRS)-Institut National de la Recherche Agronomique (INRA)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, Institut National de la Recherche Agronomique (INRA), Laboratoire de Génétique Cellulaire (LGC), Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP)

المصدر: Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2008, 36 (1), pp.D485-D490. ⟨10.1093/nar/gkm805⟩
Nucleic Acids Research 1 (36), D485-D490. (2008)

مصطلحات موضوعية: Sequence alignment, Genomics, Computational biology, Genome browser, syntenie, Biology, Genome, Synteny, DNA sequencing, Conserved sequence, 03 medical and health sciences, User-Computer Interface, 0302 clinical medicine, Genetics, Animals, Humans, [SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM], Conserved Sequence, 030304 developmental biology, Whole genome sequencing, 0303 health sciences, Internet, Base Sequence, génome, food and beverages, Chromosome Mapping, Articles, Rats, 030220 oncology & carcinogenesis, BASE DE DONNEES NARCISSE, Databases, Nucleic Acid, Sequence Alignment, Genome, Bacterial, Genome, Plant

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::42ee5616b1d48f58c48f3af4945288e0
http://europepmc.org/articles/PMC2238891

المؤلفون: Shamima Sultana, Sayeeda Huq, Shawna McCallin, Deborah Moine, Shafiqul Alam Sarker, Gilles Bourdin, Firdausi Qadri, Chloé Loiseau, Ying Deng, Harald Brüssow, Bernard Berger, Tara Neville, Mahmuda Akter, Catherine Ngom-Bru, Patrick Descombes, Kaisar Talukdar, Gloria Reuteler, Sahar El Aidy, Michèle Delley, Mohamed Kassam, Florence Charton

المصدر: EBioMedicine
EBioMedicine, Vol 4, Iss C, Pp 124-137 (2016)

مصطلحات موضوعية: 0301 basic medicine, Male, viruses, medicine.medical_treatment, lcsh:Medicine, Administration, Oral, medicine.disease_cause, Enteropathogenic Escherichia coli, EPEC, enteropathogenic E. coli, ETEC, enterotoxigenic E. coli, Bacteriophages, Child, RCT, randomized controlled trial, Pathogen, Children, Escherichia coli Infections, lcsh:R5-920, Bangladesh, biology, Streptococcus, General Medicine, Diarrhea, ORS, oral rehydration solution, qPCR, quantitative polymerase chain reaction, Female, medicine.symptom, lcsh:Medicine (General), Research Paper, Phage therapy, Adolescent, Cfu, colony forming unit, EAEC, enteroaggregative E. coli, pfu, plaque forming unit, Coliphages, General Biochemistry, Genetics and Molecular Biology, Microbiology, T, T4 phage cocktail from NRC, 03 medical and health sciences, Antibiotic resistance, medicine, PT, phage therapy, Escherichia coli, Humans, Coliphage, Phage Therapy, lcsh:R, biology.organism_classification, Virology, 030104 developmental biology, Bifidobacterium, Bacterial virus, M, ColiProteus phage cocktail from Microgen, P, placebo

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ce58496b3e7ded727abc059eebf3646e
https://pubmed.ncbi.nlm.nih.gov/26981577