المؤلفون: Caroline Barretto, Jerome Combrisson, Nicholas Bokulich

المصدر: Frontiers in Microbiology, Vol 13 (2022)

مصطلحات موضوعية: genomics, metagenomics, food safety, food quality, product development, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.1056796/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/b868ea448edf472fa50af6d644ee8734

المؤلفون: Leen Baert, Johan Gimonet, Caroline Barretto, Coralie Fournier, Balamurugan Jagadeesan

المصدر: Scientific Reports, Vol 11, Iss 1, Pp 1-11 (2021)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2045-2322

URL الوصول: https://doaj.org/article/6b7ed66fcd8040c98e656cddaeeadb34

المؤلفون: Benjamin Diep, Caroline Barretto, Anne-Catherine Portmann, Coralie Fournier, Aneta Karczmarek, Guido Voets, Shaoting Li, Xiangyu Deng, Adrianne Klijn

المصدر: Frontiers in Microbiology, Vol 10 (2019)

مصطلحات موضوعية: Salmonella serotyping, microarray, WGS, phenotypic method, methods comparison, Salmonella enterica, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fmicb.2019.02554/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/475dac78f5084c7f8e97c5f08fcae359

المؤلفون: Anne-Catherine Portmann, Coralie Fournier, Johan Gimonet, Catherine Ngom-Bru, Caroline Barretto, Leen Baert

المصدر: Frontiers in Microbiology, Vol 9 (2018)

مصطلحات موضوعية: validation, SNP, WGS, Listeria monocytogenes, Salmonella enterica, phylogeny, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: http://journal.frontiersin.org/article/10.3389/fmicb.2018.00446/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/8e0b2f7d5de648b2bd2531b47f49af77

المؤلفون: Caroline Barretto, Cristian Rincón, Anne-Catherine Portmann, Catherine Ngom-Bru

المصدر: Genes; Volume 12; Issue 2; Pages: 275

مصطلحات موضوعية: whole genome sequencing, food industry, bioinformatics, workflow, data analysis, metadata, food safety, data quality

جغرافية الموضوع: agris

وصف الملف: application/pdf

Relation: Technologies and Resources for Genetics; https://dx.doi.org/10.3390/genes12020275

الاتاحة: https://doi.org/10.3390/genes12020275

المؤلفون: Johan Gimonet, Balamurugan Jagadeesan, Caroline Barretto, Coralie Fournier, Leen Baert

المصدر: Scientific Reports, Vol 11, Iss 1, Pp 1-11 (2021)
Scientific Reports

مصطلحات موضوعية: 0301 basic medicine, Serotype, Salmonella, Veterinary medicine, Mutation rate, Hot Temperature, Water activity, Food Handling, Science, 030106 microbiology, Population, Single-nucleotide polymorphism, Biology, Serogroup, medicine.disease_cause, Microbiology, Article, 03 medical and health sciences, Stress, Physiological, Bacterial genetics, medicine, Allele, education, education.field_of_study, Multidisciplinary, Whole Genome Sequencing, Water, Outbreak, 030104 developmental biology, Mutation, Food Microbiology, Medicine, Genetic Fitness, Microbial genetics, Genome, Bacterial

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cff033f9494abb3cbbfc973e0a3294c3
https://doaj.org/article/6b7ed66fcd8040c98e656cddaeeadb34

المؤلفون: Jean-michel Panoff, Fabrizio Arigoni, Harald Brüssow, Emmanuel Denou, Bernard Berger, Caroline Barretto, Strain Ncclactobacillus Johnsonii

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://jb.asm.org/content/189/22/8109.full.pdf.

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.554.9616; http://jb.asm.org/content/189/22/8109.full.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.554.9616
http://jb.asm.org/content/189/22/8109.full.pdf

المؤلفون: Harald Brüssow, Emmanuel Denou, Sophie Zuber, Catherine Ngom-bru, Caroline Barretto

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://jb.asm.org/content/189/22/8206.full.pdf.

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.621.1818; http://jb.asm.org/content/189/22/8206.full.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.621.1818
http://jb.asm.org/content/189/22/8206.full.pdf

المؤلفون: Adrianne Klijn, Coralie Fournier, Guido Voets, Anne-Catherine Portmann, Caroline Barretto, Aneta Karczmarek, Shaoting Li, Benjamin Diep, Xiangyu Deng

المصدر: Frontiers in Microbiology
Frontiers in Microbiology, Vol 10 (2019)

مصطلحات موضوعية: Microbiology (medical), Serotype, Salmonella, In silico, lcsh:QR1-502, Computational biology, Biology, Salmonella serotyping, medicine.disease_cause, Microbiology, lcsh:Microbiology, 03 medical and health sciences, medicine, Methods, phenotypic method, Source tracking, 030304 developmental biology, Whole genome sequencing, 0303 health sciences, 030306 microbiology, Strain (biology), Salmonella enterica, biology.organism_classification, Subtyping, microarray, WGS, methods comparison

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ad553ee276b882cd03098676b5faaea8
http://europepmc.org/articles/PMC6859910

المؤلفون: Daniel P. Mulvihill, Caroline Barretto, Jeremy S. Hyams, Paul T. Matsudaira

المساهمون: The Pennsylvania State University CiteSeerX Archives

المصدر: http://www.molbiolcell.org/content/12/12/4044.full.pdf.

وصف الملف: application/pdf

Relation: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.323.2474; http://www.molbiolcell.org/content/12/12/4044.full.pdf

الاتاحة: http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.323.2474
http://www.molbiolcell.org/content/12/12/4044.full.pdf

المؤلفون: Caroline Barretto, Sébastien Holvoet, Carine Blanchard, Sophie Nutten, Marie Perrot, Rémi Doucet-Ladevèze

المصدر: Allergy. 71:1753-1761

مصطلحات موضوعية: 0301 basic medicine, Immunology, Administration, Oral, Inflammation, Context (language use), law.invention, Mice, 03 medical and health sciences, Probiotic, 0302 clinical medicine, law, Eosinophilia, medicine, Animals, Humans, Immunology and Allergy, Esophagus, Eosinophilic esophagitis, Lung, Skin, biology, business.industry, Probiotics, Lactococcus lactis, Eosinophilic Esophagitis, Immunoglobulin E, biology.organism_classification, medicine.disease, Antibodies, Bacterial, Esophageal Tissue, Disease Models, Animal, 030104 developmental biology, medicine.anatomical_structure, Immunoglobulin G, Female, 030211 gastroenterology & hepatology, medicine.symptom, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e39b1d77684ec6747cea19e0d33ed0c0
https://doi.org/10.1111/all.12951

المؤلفون: Leen Baert, Deborah Moine, Coralie Fournier, Johan Gimonet, Caroline Barretto, Katia Rouzeau-Szynalski

المصدر: International journal of food microbiology. 298

مصطلحات موضوعية: Serotype, Veterinary medicine, Salmonella, Context (language use), Biology, medicine.disease_cause, Serogroup, Microbiology, Genome, 03 medical and health sciences, Industrial Microbiology, medicine, Food microbiology, Serotyping, 030304 developmental biology, Whole genome sequencing, 0303 health sciences, Whole Genome Sequencing, 030306 microbiology, General Medicine, Contamination, Europe, Food Microbiology, Laboratory Proficiency Testing, Laboratories, Food Science

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0b078917005d1845d950e880ed76ad44
https://pubmed.ncbi.nlm.nih.gov/30903917

المؤلفون: Caroline Barretto, Anne-Catherine Portmann, Coralie Fournier, Leen Baert, Johan Gimonet, Catherine Ngom-Bru

المصدر: Frontiers in Microbiology, Vol 9 (2018)
Frontiers in Microbiology

مصطلحات موضوعية: 0301 basic medicine, Microbiology (medical), lcsh:QR1-502, SNP, Bacterial genome size, Computational biology, Biology, phylogeny, Genome, Microbiology, DNA sequencing, lcsh:Microbiology, 03 medical and health sciences, Source tracking, Original Research, Whole genome sequencing, validation, outbreak, source tracking, Salmonella enterica, biology.organism_classification, DNA extraction, Listeria monocytogenes, 030104 developmental biology, Workflow, WGS

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f7ce3069f712024fe17bf49a12f65d60
http://journal.frontiersin.org/article/10.3389/fmicb.2018.00446/full

المؤلفون: Benjamin Diep, Caroline Barretto, Anne-Catherine Portmann, Coralie Fournier, Aneta Karczmarek, Guido Voets, Shaoting Li, Xiangyu Deng, Adrianne Klijn

مصطلحات موضوعية: Microbiology, Microbial Genetics, Microbial Ecology, Mycology, Salmonella serotyping, microarray, WGS, phenotypic method, methods comparison, Salmonella enterica

Relation: https://figshare.com/articles/dataset/Table_2_Salmonella_Serotyping_Comparison_of_the_Traditional_Method_to_a_Microarray-Based_Method_and_an_in_silico_Platform_Using_Whole_Genome_Sequencing_Data_docx/10283933

الاتاحة: https://doi.org/10.3389/fmicb.2019.02554.s002
https://figshare.com/articles/dataset/Table_2_Salmonella_Serotyping_Comparison_of_the_Traditional_Method_to_a_Microarray-Based_Method_and_an_in_silico_Platform_Using_Whole_Genome_Sequencing_Data_docx/10283933

المؤلفون: Gilles Faucherand, Alienor Genevaz, Pierre Sagory-Zalkind, Stéphane Duboux, Coralie Fournier, Pierre-Emmanuel Ciron, Deborah Moine, Caroline Barretto, Agnès Iltis, Mohamed Kassam, Catherine Ngom-Bru, Patrick Descombes

المصدر: Genome Announcements

مصطلحات موضوعية: 0301 basic medicine, Whole genome sequencing, Genetics, biology, Lactobacillus fermentum, Strain (biology), food and beverages, Chromosome, biology.organism_classification, 03 medical and health sciences, 030104 developmental biology, Lactic acid bacterium, Plasmid, Prokaryotes, Molecular Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4a3d0ce22b361e0a0d6ca3b6fe3b6ac2
https://doi.org/10.1128/genomea.01254-16

المؤلفون: Adrianne Klijn, Catherine Ngom Bru, Patrick Descombes, Leen Baert, Yanjie Tang, Deborah Moine, Caroline Barretto, Mohamed Kassam

المصدر: Genome Announcements

مصطلحات موضوعية: 0301 basic medicine, Genetics, biology, Strain (biology), 030106 microbiology, Single-nucleotide polymorphism, biology.organism_classification, Genus Cronobacter, Cronobacter sakazakii, Genome, 03 medical and health sciences, 030104 developmental biology, TheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITY, Prokaryotes, Cronobacter, Molecular Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::df19c165adf6c9886f1725f082b64e7e
https://doi.org/10.1128/genomea.00142-16

المؤلفون: Rodrigo Bibiloni, Anne Bruttin, Caroline Barretto, Anne-Cécile Pittet, Harald Brüssow, Lutz Krause, Shamima Sultana, Gloria Reuteler, Shawna McCallin, Bernard Berger, Sayeda Huq, Shafiqul Alam Sarker

المصدر: Virology. 434:222-232

مصطلحات موضوعية: Adult, Male, medicine.medical_specialty, Bioavailability, Fecal microbiota, viruses, Administration, Oral, Biology, medicine.disease_cause, Placebo, Microbiology, Placebos, Feces, Young Adult, Virology, Internal medicine, Escherichia coli, medicine, Humans, Bacteriophages, Adverse effect, Bangladesh, Biological Products, Hematology, Human phage therapy, Biological Therapy, Titer, Human Experimentation, Bacterial 16S rRNA, Female, T-Phages, Safety

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d23a1eeb3e38dc9b773c16ed9f3fa6b1
https://doi.org/10.1016/j.virol.2012.09.002

المؤلفون: Caroline Barretto, Catherine Ngom-Bru

المصدر: Briefings in Bioinformatics. 13:747-750

مصطلحات موضوعية: biology, Computational biology, Gut flora, biology.organism_classification, digestive system, Diet, Gastrointestinal Tract, Human gut, Metagenomics, Humans, Metagenome, Molecular Biology, Analysis method, Information Systems

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ce4425324d691f51960aa1250870d968
https://doi.org/10.1093/bib/bbs019

المؤلفون: Jochen Reetz, Stefan Hertwig, Harald Brüssow, Caroline Barretto, Thomas Alter, Claudia Jäckel, Jens A. Hammerl, Rudi Lurz, Sebastian Beck

المصدر: Journal of Virology. 85:8597-8605

مصطلحات موضوعية: Genes, Viral, viruses, Phagemid, Molecular Sequence Data, Immunology, Microbiology, Campylobacter jejuni, Genome, Homing endonuclease, chemistry.chemical_compound, Virology, Gene Order, Phage group, Bacteriophage T4, Humans, Bacteriophages, Gene, Genetics, Sequence Homology, Amino Acid, biology, Sequence Analysis, DNA, biology.organism_classification, Restriction enzyme, Genetic Diversity and Evolution, chemistry, Myoviridae, Insect Science, DNA, Viral, biology.protein, DNA

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b4743b2f9fd62416e6c21c406339c4a9
https://doi.org/10.1128/jvi.00395-11

المؤلفون: Harald Brüssow, Jean-Michel Panoff, Bernard Berger, Anne-Cécile Pittet, Raymond David Pridmore, Marie-Camille Zwahlen, Marco Ventura, Emmanuel Denou, Caroline Barretto

المصدر: Journal of Bacteriology. 190:5806-5813

مصطلحات موضوعية: Genes, Viral, Genotype, Prophages, Molecular Sequence Data, Bacteriophages, Transposons, and Plasmids, Lactobacillus gasseri, Microbiology, Defective virus, Plasmid, Lysogen, Amino Acid Sequence, Molecular Biology, Prophage, Lactobacillus johnsonii, Genetics, Base Sequence, Models, Genetic, biology, Genetic Complementation Test, Defective Viruses, biology.organism_classification, Temperateness, Lactobacillus, Phenotype, Gene cassette, Methionine Sulfoxide Reductases, DNA, Viral, Oxidoreductases, Sequence Alignment, Genome, Bacterial

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a5cec91754a5a997545f49dc6e5438bf
https://doi.org/10.1128/jb.01802-07