المؤلفون: Oliver, Tiffany, Varghese, Neha, Roux, Simon, Schulz, Frederik, Huntemann, Marcel, Clum, Alicia, Foster, Brian, Foster, Bryce, Riley, Robert, LaButti, Kurt, Egan, Robert, Hajek, Patrick, Mukherjee, Supratim, Ovchinnikova, Galina, Reddy, TBK, Calhoun, Sara, Hayes, Richard D, Rohwer, Robin R, Zhou, Zhichao, Daum, Chris, Copeland, Alex, Chen, I-Min A, Ivanova, Natalia N, Kyrpides, Nikos C, Mouncey, Nigel J, del Rio, Tijana Glavina, Grigoriev, Igor V, Hofmeyr, Steven, Oliker, Leonid, Yelick, Katherine, Anantharaman, Karthik, McMahon, Katherine D, Woyke, Tanja, Eloe-Fadrosh, Emiley A

المصدر: Scientific Data. 11(1)

مصطلحات موضوعية: Microbiology, Biological Sciences, Ecology, Bacteria, Lakes, Metagenome, Metagenomics, Phylogeny

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/5tz9q572
https://escholarship.org/content/qt5tz9q572/qt5tz9q572.pdf

المؤلفون: Hensen, Noah, Bonometti, Lucas, Westerberg, Ivar, Brännström, Ioana Onut, Guillou, Sonia, Cros-Aarteil, Sandrine, Calhoun, Sara, Haridas, Sajeet, Kuo, Alan, Mondo, Stephen, Pangilinan, Jasmyn, Riley, Robert, LaButti, Kurt, Andreopoulos, Bill, Lipzen, Anna, Chen, Cindy, Yan, Mi, Daum, Chris, Ng, Vivian, Clum, Alicia, Steindorff, Andrei, Ohm, Robin A, Martin, Francis, Silar, Philippe, Natvig, Donald O, Lalanne, Christophe, Gautier, Valérie, Ament-Velásquez, Sandra Lorena, Kruys, Åsa, Hutchinson, Miriam I, Powell, Amy Jo, Barry, Kerrie, Miller, Andrew N, Grigoriev, Igor V, Debuchy, Robert, Gladieux, Pierre, Hiltunen Thorén, Markus, Johannesson, Hanna

مصطلحات موضوعية: Microbiology, Biological Sciences, Evolutionary Biology, Genetics, Human Genome, Biotechnology, Humans, Phylogeny, Genomics, Genome, Sordariales, Base Sequence, Evolution, Molecular, Whole-genome phylogeny, Podosporaceae, Chaetomiaceae, Sordariaceae, Genome evolution, Zoology, Evolutionary biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/35h9s1d7
https://escholarship.org/content/qt35h9s1d7/qt35h9s1d7.pdf

المؤلفون: Visagie, Cobus M, Magistà, Donato, Ferrara, Massimo, Balocchi, Felipe, Duong, Tuan A, Eichmeier, Ales, Gramaje, David, Aylward, Janneke, Baker, Scott E, Barnes, Irene, Calhoun, Sara, De Angelis, Maria, Frisvad, Jens C, Hakalova, Eliska, Hayes, Richard D, Houbraken, Jos, Grigoriev, Igor V, LaButti, Kurt, Leal, Catarina, Lipzen, Anna, Ng, Vivian, Pangilinan, Jasmyn, Pecenka, Jakub, Perrone, Giancarlo, Piso, Anja, Savage, Emily, Spetik, Milan, Wingfield, Michael J, Zhang, Yu, Wingfield, Brenda D

المصدر: IMA Fungus. 14(1)

مصطلحات موضوعية: Microbiology, Plant Biology, Biological Sciences, Plant biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/8jr2b2dj
https://escholarship.org/content/qt8jr2b2dj/qt8jr2b2dj.pdf

المؤلفون: Diesel, Jose, Molano, Gary, Montecinos, Gabriel J, DeWeese, Kelly, Calhoun, Sara, Kuo, Alan, Lipzen, Anna, Salamov, Asaf, Grigoriev, Igor V, Reed, Daniel C, Miller, Robert J, Nuzhdin, Sergey V, Alberto, Filipe

المصدر: BMC Genomics. 24(1)

مصطلحات موضوعية: Biological Sciences, Bioinformatics and Computational Biology, Genetics, Human Genome, Macrocystis, Genomics, Alginates, Diploidy, Fertilizers, Genome, Giant kelp, Macrocystis pyrifera, Brown macroalga, Population genetics, Information and Computing Sciences, Medical and Health Sciences, Bioinformatics, Biological sciences, Biomedical and clinical sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/1494b2nk
https://escholarship.org/content/qt1494b2nk/qt1494b2nk.pdf

المؤلفون: Steindorff, Andrei S, Seong, Kyungyong, Carver, Akiko, Calhoun, Sara, Fischer, Monika S, Stillman, Kyra, Liu, Haowen, Drula, Elodie, Henrissat, Bernard, Simpson, Hunter J, Schilling, Jonathan S, Lipzen, Anna, He, Guifen, Yan, Mi, Andreopoulos, Bill, Pangilinan, Jasmyn, LaButti, Kurt, Ng, Vivian, Traxler, Matthew, Bruns, Thomas D, Grigoriev, Igor V

المصدر: New Phytologist. 236(3)

مصطلحات موضوعية: Microbiology, Biological Sciences, Ecology, Genetics, Human Genome, Charcoal, Fungi, Genomics, Sexual Development, Soil, Transcription Factors, fungal genomics, pyronema, pyrophilous fungi, sexual development, wildfires, Agricultural and Veterinary Sciences, Plant Biology & Botany, Plant biology, Climate change impacts and adaptation, Ecological applications

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/47h9q4nx
https://escholarship.org/content/qt47h9q4nx/qt47h9q4nx.pdf

المؤلفون: Calhoun, Sara, Kamel, Bishoy, Bell, Tisza AS, Kruse, Colin PS, Riley, Robert, Singan, Vasanth, Kunde, Yuliya, Gleasner, Cheryl D, Chovatia, Mansi, Sandor, Laura, Daum, Christopher, Treen, Daniel, Bowen, Benjamin P, Louie, Katherine B, Northen, Trent R, Starkenburg, Shawn R, Grigoriev, Igor V

مصطلحات موضوعية: Biological Sciences, Industrial Biotechnology, Genetics, Genomics, Transcriptomics, Metabolomics, Salt stress, Temperature stress, Plant Biology, Chemical Engineering, Plant biology, Chemical engineering

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/6vn6888k
https://escholarship.org/content/qt6vn6888k/qt6vn6888k.pdf

المؤلفون: Calhoun, Sara, Bell, Tisza Ann Szeremy, Dahlin, Lukas R, Kunde, Yuliya, LaButti, Kurt, Louie, Katherine B, Kuftin, Andrea, Treen, Daniel, Dilworth, David, Mihaltcheva, Sirma, Daum, Christopher, Bowen, Benjamin P, Northen, Trent R, Guarnieri, Michael T, Starkenburg, Shawn R, Grigoriev, Igor V

المصدر: Communications biology. 4(1)

مصطلحات موضوعية: Scenedesmus, Fatty Acids, Amino Acids, Ion Channels, Antiporters, Transcription Factors, Gene Expression Profiling, Biomass, Temperature, Gene Expression Regulation, Energy Metabolism, Genome, Lipogenesis, Metabolomics, Metabolome, Microalgae, Transcriptome, Salt Tolerance, Genetics, Biotechnology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/1sh7m3gj

المؤلفون: Grigoriev, Igor V, Hayes, Richard D, Calhoun, Sara, Kamel, Bishoy, Wang, Alice, Ahrendt, Steven, Dusheyko, Sergey, Nikitin, Roman, Mondo, Stephen J, Salamov, Asaf, Shabalov, Igor, Kuo, Alan

المصدر: Nucleic Acids Research. 49(D1)

مصطلحات موضوعية: Biological Sciences, Bioinformatics and Computational Biology, Genetics, Microbiology, Plant Biology, Human Genome, Biotechnology, 1.5 Resources and infrastructure (underpinning), Generic health relevance, Algal Proteins, Computational Biology, Databases, Genetic, Energy Metabolism, Genome, Genomics, Internet, Molecular Sequence Annotation, Photosynthesis, Seaweed, User-Computer Interface, Web Browser, Environmental Sciences, Information and Computing Sciences, Developmental Biology, Biological sciences, Chemical sciences, Environmental sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/5v63934m
https://escholarship.org/content/qt5v63934m/qt5v63934m.pdf

المؤلفون: Steindorff, Andrei S, Carver, Akiko, Calhoun, Sara, Stillman, Kyra, Liu, Haowen, Lipzen, Anna, He, Guifen, Yan, Mi, Pangilinan, Jasmyn, LaButti, Kurt, Ng, Vivian, Bruns, Thomas D, Grigoriev, Igor V

المصدر: Environmental Microbiology. 23(1)

مصطلحات موضوعية: Microbiology, Biological Sciences, Ecology, Carbon, Ecosystem, Fungal Proteins, Fungi, Genes, Developmental, Genomics, Soil, Soil Microbiology, Wildfires, Evolutionary Biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/2c37s558
https://escholarship.org/content/qt2c37s558/qt2c37s558.pdf

المؤلفون: Polle, Jürgen EW, Calhoun, Sara, McKie-Krisberg, Zaid, Prochnik, Simon, Neofotis, Peter, Yim, Won C, Hathwaik, Leyla T, Jenkins, Jerry, Molina, Henrik, Bunkenborg, Jakob, Grigoriev, Igor V, Barry, Kerrie, Schmutz, Jeremy, Jin, EonSeon, Cushman, John C, Magnusson, Jon K

مصطلحات موضوعية: Biochemistry and Cell Biology, Biological Sciences, Biotechnology, Genetics, 1.1 Normal biological development and functioning, Plant Biology, Chemical Engineering, Industrial Biotechnology, Plant biology, Chemical engineering

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/9qg217vm
https://escholarship.org/content/qt9qg217vm/qt9qg217vm.pdf

المؤلفون: Wu, Vincent W, Thieme, Nils, Huberman, Lori B, Dietschmann, Axel, Kowbel, David J, Lee, Juna, Calhoun, Sara, Singan, Vasanth R, Lipzen, Anna, Xiong, Yi, Monti, Remo, Blow, Matthew J, O’Malley, Ronan C, Grigoriev, Igor V, Benz, J Philipp, Glass, N Louise

المصدر: Proceedings of the National Academy of Sciences of the United States of America. 117(11)

مصطلحات موضوعية: Microbiology, Plant Biology, Biological Sciences, Genetics, Biotechnology, 1.1 Normal biological development and functioning, Biofuels, Biomass, Catabolite Repression, Cell Wall, Fungal Proteins, Gene Expression Regulation, Fungal, Metabolic Engineering, Metabolic Networks and Pathways, Neurospora crassa, Pectins, Polysaccharides, RNA-Seq, Transcription Factors, transcriptional networks, plant biomass deconstruction, nutrient sensing, DAP-seq, RNA-seq

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/5b4399t5
https://escholarship.org/content/qt5b4399t5/qt5b4399t5.pdf

المؤلفون: Calhoun, Sara, Mondo, Stephen J, Grigoriev, Igor V

المصدر: Nature reviews. Microbiology. 17(11)

مصطلحات موضوعية: Yeasts, Evolution, Molecular, Genome, Fungal, Genetic Variation, Evolution, Molecular, Genome, Fungal, Microbiology, Medical Microbiology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/0b86z3h5

المؤلفون: Visagie, Cobus M., Magistà, Donato, Ferrara, Massimo, Balocchi, Felipe, Duong, Tuan A., Eichmeier, Ales, Gramaje, David, Aylward, Janneke, Baker, Scott E., Barnes, Irene, Calhoun, Sara, De Angelis, Maria, Frisvad, Jens C., Hakalova, Eliska, Hayes, Richard D., Houbraken, Jos, Grigoriev, Igor V., LaButti, Kurt, Leal, Catarina, Lipzen, Anna, Ng, Vivian, Pangilinan, Jasmyn, Pecenka, Jakub, Perrone, Giancarlo, Piso, Anja, Savage, Emily, Spetik, Milan, Wingfield, Michael J., Zhang, Yu, Wingfield, Brenda D.

وصف الملف: application/pdf

Relation: info:eu-repo/semantics/altIdentifier/eissn/2210-6359; info:eu-repo/semantics/altIdentifier/pissn/2210-6340; IMA genome-F18: The re-identification of Penicillium genomes available in NCBI and draft genomes for Penicillium species from dry cured meat, Penicillium biforme, P. brevicompactum, P. solitum, and P. cvjetkovicii, Pewenomyces kutranfy, Pew. lalenivora, Pew. tapulicola, Pew. kalosus, Teratosphaeria carnegiei, and Trichoderma atroviride SC1, 2023, vol. 14, núm. 1; https://investigacion.unirioja.es/documentos/65351b557bba975a1caaf249; urn:issn:2210-6359; urn:issn:2210-6340

الاتاحة: https://investigacion.unirioja.es/documentos/65351b557bba975a1caaf249
https://doi.org/10.1186/S43008-023-00121-W

المؤلفون: Korczynska, Magdalena, Wichelecki, Daniel, San Francisco, Brian, Zhao, Suwen, Rodionov, Dmitry, Vetting, Matthew, Al-Obaidi, Nawar, Russel, Daniel, Almo, Steven, Osterman, Andrei, Gerlt, John, Sali, Andrej, OMeara, Matthew, Scott, David, Jacobson, Matthew, Shoichet, Brian, Lin, Harrison, Calhoun, Sara, Morris, John

مصطلحات موضوعية: biophysics, computational biology, enzyme function annotation, integrative pathway mapping, l-gulonate catabolic pathway, none, pathway prediction, structural biology, structure based pathway discovery, systems biology, Computational Biology, Enzymes, Haemophilus influenzae, Metabolic Networks and Pathways, Systems Biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/3628z8c2
https://escholarship.org/content/qt3628z8c2/qt3628z8c2.pdf

المؤلفون: Calhoun, Sara, Korczynska, Magdalena, Wichelecki, Daniel J, San Francisco, Brian, Zhao, Suwen, Rodionov, Dmitry A, Vetting, Matthew W, Al-Obaidi, Nawar F, Lin, Henry, O'Meara, Matthew J, Scott, David A, Morris, John H, Russel, Daniel, Almo, Steven C, Osterman, Andrei L, Gerlt, John A, Jacobson, Matthew P, Shoichet, Brian K, Sali, Andrej

مصطلحات موضوعية: Haemophilus influenzae, Enzymes, Computational Biology, Systems Biology, Metabolic Networks and Pathways, biophysics, computational biology, enzyme function annotation, integrative pathway mapping, l-gulonate catabolic pathway, none, pathway prediction, structural biology, structure based pathway discovery, systems biology, 1.1 Normal biological development and functioning, Biochemistry and Cell Biology

URL الوصول: https://escholarship.org/uc/item/0q9306tp

المؤلفون: Holliday, Gemma, Akiva, Eyal, Brown, Shoshana, Pieper, Ursula, Booker, Squire, Babbitt, Patricia, Sali, Andrej, Calhoun, Sara, Meng, Elaine

مصطلحات موضوعية: Classification of Radical SAM enzymes by sequence similarity, Multiple domain structures of radical SAM superfamily enzymes, Phylogenetic representation, Radical SAM superfamily census, Sequence similarity networks, Structure–function mapping, Subgroups and families in the radical SAM superfamily, Amino Acid Sequence, Computational Biology, Enzymes, Evolution, Molecular, Free Radicals, Phylogeny, Protein Domains, S-Adenosylmethionine, Sequence Alignment, Structure-Activity Relationship

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4qk9d6np

المؤلفون: Holliday, Gemma L, Akiva, Eyal, Meng, Elaine C, Brown, Shoshana D, Calhoun, Sara, Pieper, Ursula, Sali, Andrej, Booker, Squire J, Babbitt, Patricia C

مصطلحات موضوعية: Free Radicals, Enzymes, S-Adenosylmethionine, Sequence Alignment, Computational Biology, Evolution, Molecular, Phylogeny, Amino Acid Sequence, Structure-Activity Relationship, Protein Domains, Classification of Radical SAM enzymes by sequence similarity, Multiple domain structures of radical SAM superfamily enzymes, Phylogenetic representation, Radical SAM superfamily census, Sequence similarity networks, Structure–function mapping, Subgroups and families in the radical SAM superfamily, Underpinning research, 1.1 Normal biological development and functioning, Generic health relevance, Biochemistry and Cell Biology, Biochemistry & Molecular Biology

URL الوصول: https://escholarship.org/uc/item/6fg2h0r9

المؤلفون: Steindorff, Andrei, Seong, Kyungyong, Carver, Akiko, Calhoun, Sara, Fischer, Monika, Stillman, Kyra, Liu, Haowen, Drula, Elodie, Henrissat, Bernard, Simpson, Hunter, Schilling, Jonathan, Lipzen, Anna, He, Guifen, Yan, Mi, Andreopoulos, Bill, Pangilinan, Jasmyn, Labutti, Kurt, Ng, Vivian, Traxler, Matthew, Bruns, Thomas, Grigoriev, Igor

المساهمون: Biodiversité et Biotechnologie Fongiques (BBF), Aix Marseille Université (AMU)-École Centrale de Marseille (ECM)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Architecture et fonction des macromolécules biologiques (AFMB), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)

المصدر: ISSN: 0028-646X.

مصطلحات موضوعية: fungal genomics, pyronema, pyrophilous fungi, sexual developmen, twildfires, [SDE]Environmental Sciences

Relation: info:eu-repo/semantics/altIdentifier/pmid/35898177; hal-03992634; https://hal.inrae.fr/hal-03992634; https://hal.inrae.fr/hal-03992634/document; https://hal.inrae.fr/hal-03992634/file/2022_Steindorff_New_Phyto.pdf; PUBMED: 35898177; WOS: 000848786300001

الاتاحة: https://hal.inrae.fr/hal-03992634
https://hal.inrae.fr/hal-03992634/document
https://hal.inrae.fr/hal-03992634/file/2022_Steindorff_New_Phyto.pdf
https://doi.org/10.1111/nph.18407

المؤلفون: Kamel, Hooman, Longstreth, W. T., Tirschwell, David L., Kronmal, Richard A., Marshall, Randolph S., Broderick, Joseph P., Aragón García, Rebeca, Plummer, Pamela, Sabagha, Noor, Pauls, Qi, Cassarly, Christy, Dillon, Catherine R., Di Tullio, Marco R., Hod, Eldad A., Soliman, Elsayed Z., Gladstone, David J., Healey, Jeff S., Sharma, Mukul, Chaturvedi, Seemant, Janis, L. Scott, Krishnaiah, Balaji, Nahab, Fadi, Kasner, Scott E., Stanton, Robert J., Kleindorfer, Dawn O., Starr, Matthew, Winder, Toni R., Clark, Wayne M., Miller, Benjamin R., Elkind, Mitchell S. V., Asaithambi, Ganesh, Klaiman, Maxwell, Malhotra, Konark, Fetter, Mary, Wanahita, Anna, Merritt, Stacie, Sajjad, Rehan, McPolin, Kate, Coull, Bruce, Kavathia, Shriya, Kolikonda, Murali, Calhoun, Sara, de los Rios la Rosa, Felipe, Del Conde, Ian, Elysée, Josette, Aghaebrahim, Amin, Stratoberdha, Melissa, Ford, Andria, Giles, James, Wang, Yan

المصدر: JAMA ; volume 331, issue 7, page 573 ; ISSN 0098-7484

الاتاحة: http://dx.doi.org/10.1001/jama.2023.27188
https://jamanetwork.com/journals/jama/articlepdf/2814933/jama_kamel_2024_oi_230163_1708371535.52838.pdf

المؤلفون: Ministry of Education, Youth and Sports (Czech Republic), Mendel University, Department of Energy (US), Joint Genome Institute (US), Bioenergy Research Center (US), Department of Science and Innovation (South Africa), National Research Foundation (South Africa), Visagie, Cobus M., Magistà, Donato, Ferrara, Massimo, Balocchi, Felipe, Duong, Tuan A., Eichmeier, Ales, Gramaje, David, Aylward, Janneke, Baker, Scott E., Barnes, Irene, Calhoun, Sara, Angelis, Maria de, Frisvad, Jens C., Hakalova, Eliska, Hayes, Richard D., Houbraken, Jos, Grigoriev, Igor V., LaButti, Kurt, Leal, Catarina, Lipzen, Anna, Ng, Vivian, Pangilinan, Jasmyn, Pecenka, Jakub, Perrone, Giancarlo, Piso, Anja, Savage, Emily, Spetik, Milan, Wingfield, Michael J., Zhang, Yu, Wingfield, Brenda D.

مصطلحات الفهرس: artículo

URL: http://hdl.handle.net/10261/347787
https://api.elsevier.com/content/abstract/scopus_id/85173698663
https://doi.org/10.1186/s43008-023-00121-w
Publisher's version
The underlying dataset has been published as supplementary material of the article in the publisher platform at https://doi.org/10.1186/s43008-023-00121-w
https://doi.org/10.1186/s43008-023-00121-w
Sí