المؤلفون: Carpenter, Sara CD, Bogdanove, Adam J, Abbot, Bhuwan, Stajich, Jason E, Uehling, Jessie K, Lovett, Brian, Kasson, Matt T, Carter, Morgan E

المصدر: Microbial Genomics. 10(6)

مصطلحات موضوعية: Microbiology, Biological Sciences, Bioinformatics and Computational Biology, Infectious Diseases, Genetics, 2.2 Factors relating to the physical environment, Generic health relevance, Infection, Symbiosis, Rhizopus, Burkholderia, Bacterial Proteins, Phylogeny, Fungal Proteins, Transcription Factors, Genetic Variation, effectors, endofungal bacteria, long- read sequencing, meta- assembled genomes, Mycetohabitans, long-read sequencing, meta-assembled genomes

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/6d14b2w4
https://escholarship.org/content/qt6d14b2w4/qt6d14b2w4.pdf

المؤلفون: Carpenter, Sara CD, Bogdanove, Adam J, Abbot, Bhuwan, Stajich, Jason E, Uehling, Jessie, Lovett, Brian, Kasson, Matt T, Carter, Morgan E

مصطلحات موضوعية: Microbiology, Biological Sciences, Bioinformatics and Computational Biology, Emerging Infectious Diseases, Infectious Diseases, Genetics, 2.2 Factors relating to the physical environment, Aetiology, Infection

URL الوصول: https://escholarship.org/uc/item/1974v21z

المؤلفون: Hutin, Mathilde, Carpenter, Sara, Baruah, Shivrajani, Campos, Paola, Boyer, Karine, Andriantsimialona, Dodelys, Rapanarivo, Solo, Hery, Pruvost, Olivier, Becker, Nathalie, Gagnevin, Lionel, Koebnik, Ralf, Szurek, Boris, Koita, Ousmane, Bogdanove, Adam, J, Rieux, Adrien

المساهمون: Plant Health Institute of Montpellier (UMR PHIM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Cornell University New York, Peuplements végétaux et bioagresseurs en milieu tropical (UMR PVBMT), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Université de La Réunion (UR)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Parc Botanique et Zoologique de Tsimbazaza, Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle (MNHN)-École Pratique des Hautes Études (EPHE), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), Université des Sciences, des Techniques et des Technologies de Bamako (USTTB), School of Integrative Plant Science CALS, College of Agriculture and Life Sciences Cornell University (CALS), Cornell University New York -Cornell University New York, Cornell University Ithaca (CU), European Regional Development Fund GURDT I2016-1731-0006632, Agropolis Foundation (E-SPACE 1504-004, MUSEOVIR 1600-004), Genoscope AP 09/10 project number 18, ANR-10-LABX-0001,AGRO,Agricultural Sciences for sustainable Development(2010), ANR-17-CE35-0009,MUSEOBACT,“Une nuit au musée”: mieux reconstuire les emergences de bactéries pathogènes des cultures grâce à des échantillons historiques(2017), ANR-10-BLAN-1723,XANTHracing,Nouvelles méthodes de traçage appliquées aux Xanthomonas pathogènes du riz et des citrus(2010)

المصدر: ISSN: 0894-0282 ; Molecular Plant-Microbe Interactions ; https://hal.inrae.fr/hal-04868054 ; Molecular Plant-Microbe Interactions, 2024, 37, pp.814 - 818. ⟨10.1094/mpmi-05-24-0062-sc⟩.

مصطلحات موضوعية: ancient genomics, avirulence factors, bacterial dissemination routes, bacterial leaf streak, Xanthomonas oryzae pv. oryzicola (Xoc), [SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]

Relation: WOS: 001379637700001

الاتاحة: https://hal.inrae.fr/hal-04868054
https://hal.inrae.fr/hal-04868054v1/document
https://hal.inrae.fr/hal-04868054v1/file/Hutin-MPMI-2024-CC-BY-NC-ND.pdf
https://doi.org/10.1094/mpmi-05-24-0062-sc

المؤلفون: Carter, Morgan E, Carpenter, Sara CD, Dubrow, Zoë E, Sabol, Mark R, Rinaldi, Fabio C, Lastovetsky, Olga A, Mondo, Stephen J, Pawlowska, Teresa E, Bogdanove, Adam J

المصدر: Proceedings of the National Academy of Sciences of the United States of America. 117(29)

مصطلحات موضوعية: Microbiology, Plant Biology, Biological Sciences, Genetics, Aetiology, 2.2 Factors relating to the physical environment, Infection, Burkholderia, Gene Expression Regulation, Fungal, Rhizopus, Stress, Physiological, Symbiosis, Transcription Activator-Like Effectors, Transcriptome, Type III Secretion Systems, Btl proteins, Rhizopus microsporus, TAL effector, symbiosis, type III secretion

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/3nf3x80g

المؤلفون: Baruah, Shivranjani, Choudhary, Sunita, Laha, Gourisankar, Sundaram, Raman M, Kholova, Jana, Bogdanove, Adam J, Gold, Kaitlin M

Relation: https://zenodo.org/communities/irc2023; https://doi.org/10.5281/zenodo.10398369; https://doi.org/10.5281/zenodo.10398370; oai:zenodo.org:10398370

الاتاحة: https://doi.org/10.5281/zenodo.10398370

المؤلفون: Mormile, Brendan W., Yan, Yan, Bauer, Taran, Wang, Li, Rivero, Rachel C., Carpenter, Sara C. D., Danmaigona Clement, Catherine, Cox, Kevin L., Zhang, Lin, Ma, Xiyu, Wheeler, Terry A., Dever, Jane K., He, Ping, Bogdanove, Adam J., Shan, Libo

المصدر: Nature Communications; 1/14/2025, Vol. 16 Issue 1, p1-17, 17p

مصطلحات موضوعية: XANTHOMONAS campestris, GENOME editing, GENETIC transcription, LIFE sciences, DISEASE management

المؤلفون: Scinto-Madonich, Nathan J., Baruah, Shivranjani, Young, Sameya, Vignona, Katherine, Read, Andrew C., Carpenter, Sara C.D., Wang, Li, Shi, Xinying, Chang, Geoffrey, Piñeros, Miguel A., Bogdanove, Adam J.

المصدر: Physiological and Molecular Plant Pathology ; volume 126, page 102031 ; ISSN 0885-5765

الاتاحة: http://dx.doi.org/10.1016/j.pmpp.2023.102031
https://api.elsevier.com/content/article/PII:S0885576523000863?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0885576523000863?httpAccept=text/plain

المؤلفون: Lachaux, Marlène, Thomas, Emilie, Bogdanove, Adam, J, Szurek, Boris, Hutin, Mathilde

المساهمون: Plant Health Institute of Montpellier (UMR PHIM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Cornell University New York, CRP-Rice (CGIAR Research Program), Plant Genome Research Program of the National Science Foundation (Division of Integrative Organismal Systems IOS-1444511)

المصدر: ISSN: 1939-8425.

مصطلحات موضوعية: Rice, Bacterial leaf blight, truncTALE/iTALE, Germplasm, Executor gene, Xa1-like resistance, [SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy

Relation: IRD: fdi:010084255; WOS: 000751334900001

الاتاحة: https://hal.inrae.fr/hal-03583945
https://hal.inrae.fr/hal-03583945v1/document
https://hal.inrae.fr/hal-03583945v1/file/Lachaux-Rice-2022-CC-BY.pdf
https://doi.org/10.1186/s12284-022-00553-9

المؤلفون: Kaya, Hilal Betul, Rai, Rhitu, Bogdanove, Adam J.

المصدر: Genome editing for precision crop breeding ; page 3-26 ; ISBN 9781003048237

الاتاحة: http://dx.doi.org/10.4324/9781003048237-2

المؤلفون: Reshetnyak, Ganna, Jacobs, Jonathan M., Auguy, Florence, Sciallano, Coline, Claude, Lisa, Medina, Clemence, Pérez-Quintero, Alvaro L., Comte, Aurore, Thomas, Emilie, Bogdanove, Adam J., Koebnik, Ralf, Szurek, Boris, Diévart, Anne, Brugidou, Christophe, Lacombe, Séverine, Cunnac, Sébastien

المصدر: Scientific Reports

مصطلحات موضوعية: Oryza sativa, Xanthomonas oryzae, locus, gène, biosynthèse, http://aims.fao.org/aos/agrovoc/c_5438, http://aims.fao.org/aos/agrovoc/c_24383, http://aims.fao.org/aos/agrovoc/c_24869, http://aims.fao.org/aos/agrovoc/c_3214, http://aims.fao.org/aos/agrovoc/c_928

وصف الملف: text

Relation: http://agritrop.cirad.fr/599972/; An atypical class of non-coding small RNAs is produced in rice leaves upon bacterial infection. Reshetnyak Ganna, Jacobs Jonathan M., Auguy Florence, Sciallano Coline, Claude Lisa, Medina Clemence, Pérez-Quintero Alvaro L., Comte Aurore, Thomas Emilie, Bogdanove Adam J., Koebnik Ralf, Szurek Boris, Diévart Anne, Brugidou Christophe, Lacombe Séverine, Cunnac Sébastien. 2021. Scientific Reports, 11 (1):24141, 20 p.https://doi.org/10.1038/s41598-021-03391-9; http://agritrop.cirad.fr/599972/1/An%20atypical%20class%20of%20non%E2%80%91coding.pdf

الاتاحة: http://agritrop.cirad.fr/599972/
http://agritrop.cirad.fr/599972/1/An%20atypical%20class%20of%20non%E2%80%91coding.pdf
https://doi.org/10.1038/s41598-021-03391-9

المؤلفون: Dubrow, Zoë E., Bogdanove, Adam J.

المساهمون: National Institute of Food and Agriculture, New York Cabbage Research and Development Board

المصدر: Journal of General Plant Pathology ; volume 87, issue 3, page 127-136 ; ISSN 1345-2630 1610-739X

الاتاحة: http://dx.doi.org/10.1007/s10327-021-00987-x
https://link.springer.com/content/pdf/10.1007/s10327-021-00987-x.pdf
https://link.springer.com/article/10.1007/s10327-021-00987-x/fulltext.html

المؤلفون: Dubrow, Zoë E., Bogdanove, Adam J.

المصدر: Journal of General Plant Pathology ; volume 87, issue 3, page 137-137 ; ISSN 1345-2630 1610-739X

الاتاحة: https://doi.org/10.1007/s10327-021-01006-9
https://link.springer.com/content/pdf/10.1007/s10327-021-01006-9.pdf
https://link.springer.com/article/10.1007/s10327-021-01006-9/fulltext.html

المؤلفون: Wang, Li, Kaya, Hilal Betul, Zhang, Ning, Rai, Rhitu, Willmann, Matthew R., Carpenter, Sara C. D., Read, Andrew C., Martin, Federico, Fei, Zhangjun, Leach, Jan E., Martin, Gregory B., Bogdanove, Adam J.

المصدر: Frontiers in Genome Editing ; volume 3 ; ISSN 2673-3439

الاتاحة: http://dx.doi.org/10.3389/fgeed.2021.617553
https://www.frontiersin.org/articles/10.3389/fgeed.2021.617553/full

المؤلفون: Bogdanove, Adam J, Koebnik, Ralf, Lu, Hong, Furutani, Ayako, Angiuoli, Samuel V, Patil, Prabhu B, Van Sluys, Marie-Anne, Ryan, Robert P, Meyer, Damien F, Han, Sang-Wook, Aparna, Gudlur, Rajaram, Misha, Delcher, Arthur L, Phillippy, Adam M, Puiu, Daniela, Schatz, Michael C, Shumway, Martin, Sommer, Daniel D, Trapnell, Cole, Benahmed, Faiza, Dimitrov, George, Madupu, Ramana, Radune, Diana, Sullivan, Steven, Jha, Gopaljee, Ishihara, Hiromichi, Lee, Sang-Won, Pandey, Alok, Sharma, Vikas, Sriariyanun, Malinee, Szurek, Boris, Vera-Cruz, Casiana M, Dorman, Karin S, Ronald, Pamela C, Verdier, Valérie, Dow, J Maxwell, Sonti, Ramesh V, Tsuge, Seiji, Brendel, Volker P, Rabinowicz, Pablo D, Leach, Jan E, White, Frank F, Salzberg, Steven L

المصدر: Journal of bacteriology. 193(19)

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/42j690x3

المؤلفون: Salzberg, Steven L, Sommer, Daniel D, Schatz, Michael C, Phillippy, Adam M, Rabinowicz, Pablo D, Tsuge, Seiji, Furutani, Ayako, Ochiai, Hirokazu, Delcher, Arthur L, Kelley, David, Madupu, Ramana, Puiu, Daniela, Radune, Diana, Shumway, Martin, Trapnell, Cole, Aparna, Gudlur, Jha, Gopaljee, Pandey, Alok, Patil, Prabhu B, Ishihara, Hiromichi, Meyer, Damien F, Szurek, Boris, Verdier, Valerie, Koebnik, Ralf, Dow, J Maxwell, Ryan, Robert P, Hirata, Hisae, Tsuyumu, Shinji, Won Lee, Sang, Seo, Young-Su, Sriariyanum, Malinee, Ronald, Pamela C, Sonti, Ramesh V, Van Sluys, Marie-Anne, Leach, Jan E, White, Frank F, Bogdanove, Adam J

المصدر: BMC genomics. 9

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4s97b741

المؤلفون: Niño-Liu, David O, Ronald, Pamela C, Bogdanove, Adam J

المصدر: Molecular plant pathology. 7(5)

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4bv915nf

المؤلفون: Bogdanove, Adam J., Martin, Gregory B.

المصدر: Proceedings of the National Academy of Sciences of the United States of America, 2000 Aug 01. 97(16), 8836-8840.

URL الوصول: https://www.jstor.org/stable/123090

المؤلفون: Bogdanove, Adam J., Kim, Jihyun F., Wei, Zhongmin, Kolchinsky, Peter, Charkowski, Amy O., Conlin, Alison K., Collmer, Alan, Beer, Steven V.

المصدر: Proceedings of the National Academy of Sciences of the United States of America, 1998 Feb 01. 95(3), 1325-1330.

URL الوصول: https://www.jstor.org/stable/44278

المؤلفون: Studholme, David J., Wicker, Emmanuel, Muzemil Abrare, Sadik, Aspin, Andrew, Bogdanove, Adam J., Broders, Kirk, Dubrow, Zoe, Grant, Murray, Jones, Jeffrey B., Karamura, Deborah, Lang, Jillian M., Leach, Jan E., Mahuku, George, Nakato, Gloria Valentine, Coutinho, Teresa A., Smith, Julian, Bull, Carolee T.

المصدر: Phytopathology

مصطلحات موضوعية: H20 - Maladies des plantes, agent pathogène, pathologie végétale, taxonomie, Xanthomonas vasicol, Xanthomonas vasicola pv. musacearum, Xanthomonas campestris, flétrissement, http://aims.fao.org/aos/agrovoc/c_5630, http://aims.fao.org/aos/agrovoc/c_5974, http://aims.fao.org/aos/agrovoc/c_7631, http://aims.fao.org/aos/agrovoc/c_9415116f, http://aims.fao.org/aos/agrovoc/c_12e7ea9d, http://aims.fao.org/aos/agrovoc/c_24379, http://aims.fao.org/aos/agrovoc/c_8391

وصف الملف: text

Relation: http://agritrop.cirad.fr/600090/; Transfer of Xanthomonas campestris pv. arecae and X. campestris pv. musacearum to X. vasicola (Vauterin) as X. vasicola pv. arecae comb. nov. and X. vasicola pv. musacearum comb. nov. and Description of X. vasicola pv. vasculorum pv. nov. Studholme David J., Wicker Emmanuel, Muzemil Abrare Sadik, Aspin Andrew, Bogdanove Adam J., Broders Kirk, Dubrow Zoe, Grant Murray, Jones Jeffrey B., Karamura Deborah, Lang Jillian M., Leach Jan E., Mahuku George, Nakato Gloria Valentine, Coutinho Teresa A., Smith Julian, Bull Carolee T. 2020. Phytopathology, 110 (6) : 1153-1160.https://doi.org/10.1094/PHYTO-03-19-0098-LE; http://agritrop.cirad.fr/600090/1/Studholme%26al2020_XVM_Phytopathology.pdf

الاتاحة: http://agritrop.cirad.fr/600090/
http://agritrop.cirad.fr/600090/1/Studholme%26al2020_XVM_Phytopathology.pdf
https://doi.org/10.1094/PHYTO-03-19-0098-LE

المؤلفون: Read, Andrew C., Moscou, Matthew J., Zimin, Aleksey V., Pertea, Geo, Meyer, Rachel S., Purugganan, Michael D., Leach, Jan E., Triplett, Lindsay R., Salzberg, Steven L., Bogdanove, Adam J.

المساهمون: Coaker, Gitta, Plant Genome Research Program of the National Science Foundation, National Institute of Food and Agriculture of the U.S. Department of Agriculture, Foundation for the National Institutes of Health, Biotechnology and Biological Sciences Research Council, Gatsby Charitable Foundation

المصدر: PLOS Genetics ; volume 16, issue 1, page e1008571 ; ISSN 1553-7404

الاتاحة: http://dx.doi.org/10.1371/journal.pgen.1008571
https://dx.plos.org/10.1371/journal.pgen.1008571